RNA–Protein interactions for RNA: ENST00000409785.8

KCMF1-201, Transcript of potassium channel modulatory factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KCMF1, Length 7,568 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCMF1-201ENST00000409785 KRTAP20-1Q3LI63 56 aa4.95□□□□□ -1.62
KCMF1-201ENST00000409785 LCE1CQ5T751 118 aa4.95□□□□□ -1.62
KCMF1-201ENST00000409785 LCE1EQ5T753 118 aa4.95□□□□□ -1.62
KCMF1-201ENST00000409785 LCE1FQ5T754 118 aa4.95□□□□□ -1.62
KCMF1-201ENST00000409785 LCE1AQ5T7P2 110 aa4.95□□□□□ -1.62
KCMF1-201ENST00000409785 MUC17Q685J3 4493 aa4.92□□□□□ -1.62
KCMF1-201ENST00000409785 KRTAP9-7A8MTY7 169 aa4.83□□□□□ -1.64
KCMF1-201ENST00000409785 KRTAP19-2Q3LHN2 52 aa4.67□□□□□ -1.66
KCMF1-201ENST00000409785 KRTAP6-2Q3LI66 62 aa4.6□□□□□ -1.67
KCMF1-201ENST00000409785 KMT2CQ8NEZ4 4911 aaKnown RBP4.6□□□□□ -1.67
KCMF1-201ENST00000409785 KRTAP2-3P0C7H8 128 aa4.59□□□□□ -1.67
KCMF1-201ENST00000409785 KRTAP2-4Q9BYR9 128 aa4.59□□□□□ -1.67
KCMF1-201ENST00000409785 KRTAP2-1Q9BYU5 128 aa4.59□□□□□ -1.67
KCMF1-201ENST00000409785 FSIP2Q5CZC0 6907 aa4.53□□□□□ -1.68
KCMF1-201ENST00000409785 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.49□□□□□ -1.69
KCMF1-201ENST00000409785 HERC2O95714 4834 aa4.48□□□□□ -1.69
KCMF1-201ENST00000409785 MT1AP04731 61 aa4.46□□□□□ -1.7
KCMF1-201ENST00000409785 LCE4AQ5TA78 99 aa4.44□□□□□ -1.7
KCMF1-201ENST00000409785 LCE2AQ5TA79 106 aaPredicted RBP4.44□□□□□ -1.7
KCMF1-201ENST00000409785 KRTAP6-1Q3LI64 71 aa4.44□□□□□ -1.7
KCMF1-201ENST00000409785 KIAA1109Q2LD37 5005 aa4.39□□□□□ -1.71
KCMF1-201ENST00000409785 KRTAP19-7Q3SYF9 63 aa4.36□□□□□ -1.71
KCMF1-201ENST00000409785 KRTAP6-3Q3LI67 103 aa4.34□□□□□ -1.71
KCMF1-201ENST00000409785 HMCN2Q8NDA2 5059 aa4.34□□□□□ -1.71
KCMF1-201ENST00000409785 RYR2Q92736 4967 aa4.33□□□□□ -1.72
KCMF1-201ENST00000409785 BIRC6Q9NR09 4857 aa4.32□□□□□ -1.72
KCMF1-201ENST00000409785 KRTAP2-2Q9BYT5 123 aa4.32□□□□□ -1.72
KCMF1-201ENST00000409785 KRTAP9-4Q9BYQ2 154 aa4.31□□□□□ -1.72
KCMF1-201ENST00000409785 HERC1Q15751 4861 aa4.27□□□□□ -1.73
KCMF1-201ENST00000409785 PCLOQ9Y6V0 5065 aa4.25□□□□□ -1.73
KCMF1-201ENST00000409785 KRTAP9-9Q9BYP9 154 aa4.24□□□□□ -1.73
KCMF1-201ENST00000409785 KRTAP20-2Q3LI61 65 aa4.09□□□□□ -1.76
KCMF1-201ENST00000409785 KRTAP9-6A8MVA2 160 aa4.02□□□□□ -1.77
KCMF1-201ENST00000409785 KRTAP4-11Q9BYQ6 195 aa4.01□□□□□ -1.77
KCMF1-201ENST00000409785 KRTAP4-6Q9BYQ5 205 aa3.98□□□□□ -1.77
KCMF1-201ENST00000409785 EPPK1P58107 5090 aaKnown RBP3.95□□□□□ -1.78
KCMF1-201ENST00000409785 SYNE1Q8NF91 8797 aaKnown RBP3.95□□□□□ -1.78
KCMF1-201ENST00000409785 MUC2Q02817 5179 aa3.94□□□□□ -1.78
KCMF1-201ENST00000409785 KRTAP4-4Q9BYR3 166 aa3.94□□□□□ -1.78
KCMF1-201ENST00000409785 KRTAP4-12Q9BQ66 201 aa3.88□□□□□ -1.79
KCMF1-201ENST00000409785 KRTAP4-2Q9BYR5 136 aa3.88□□□□□ -1.79
KCMF1-201ENST00000409785 FAT4Q6V0I7 4981 aa3.86□□□□□ -1.79
KCMF1-201ENST00000409785 KMT2DO14686 5537 aa3.85□□□□□ -1.79
KCMF1-201ENST00000409785 ABCA13Q86UQ4 5058 aa3.85□□□□□ -1.79
KCMF1-201ENST00000409785 UBR4Q5T4S7 5183 aa3.71□□□□□ -1.82
KCMF1-201ENST00000409785 OBSCNQ5VST9 7968 aa3.66□□□□□ -1.82
KCMF1-201ENST00000409785 DSTQ03001 7570 aaKnown RBP3.63□□□□□ -1.83
KCMF1-201ENST00000409785 RNF213Q63HN8 5207 aa3.58□□□□□ -1.84
KCMF1-201ENST00000409785 MACF1Q9UPN3 7388 aaKnown RBP3.51□□□□□ -1.85
KCMF1-201ENST00000409785 FCGBPQ9Y6R7 5405 aaPredicted RBP3.41□□□□□ -1.86
KCMF1-201ENST00000409785 KRTAP5-9P26371 169 aa3.37□□□□□ -1.87
KCMF1-201ENST00000409785 NEBP20929 6669 aa3.3□□□□□ -1.88
KCMF1-201ENST00000409785 USH2AO75445 5202 aa3.24□□□□□ -1.89
KCMF1-201ENST00000409785 KRTAP5-4Q6L8H1 288 aa3.19□□□□□ -1.9
KCMF1-201ENST00000409785 SSPOA2VEC9 5147 aa3.08□□□□□ -1.92
KCMF1-201ENST00000409785 KRTAP5-5Q701N2 237 aaPredicted RBP3.06□□□□□ -1.92
KCMF1-201ENST00000409785 MUC12Q9UKN1 5478 aa2.96□□□□□ -1.94
KCMF1-201ENST00000409785 MUC19Q7Z5P9 8384 aa2.93□□□□□ -1.94
KCMF1-201ENST00000409785 PHGR1C9JFL3 82 aa2.91□□□□□ -1.94
KCMF1-201ENST00000409785 KRTAP5-3Q6L8H2 238 aa2.89□□□□□ -1.95
KCMF1-201ENST00000409785 MDN1Q9NU22 5596 aa2.78□□□□□ -1.96
KCMF1-201ENST00000409785 KRTAP5-8O75690 187 aa2.72□□□□□ -1.97
KCMF1-201ENST00000409785 GPR98Q8WXG9 6306 aa2.53□□□□□ -2
KCMF1-201ENST00000409785 MUC5ACP98088 5654 aa2.47□□□□□ -2.01
KCMF1-201ENST00000409785 KRTAP5-2Q701N4 177 aa2.39□□□□□ -2.03
KCMF1-201ENST00000409785 KRTAP5-10Q6L8G5 202 aa2.28□□□□□ -2.05
KCMF1-201ENST00000409785 HMCN1Q96RW7 5635 aa2.27□□□□□ -2.05
KCMF1-201ENST00000409785 KRTAP5-1Q6L8H4 278 aa2.18□□□□□ -2.06
KCMF1-201ENST00000409785 MUC5BQ9HC84 5762 aaPredicted RBP2.12□□□□□ -2.07
KCMF1-201ENST00000409785 AHNAK2Q8IVF2 5795 aa2.1□□□□□ -2.07
KCMF1-201ENST00000409785 KRTAP5-11Q6L8G4 156 aa2.01□□□□□ -2.09
KCMF1-201ENST00000409785 KRTAP21-2Q3LI59 83 aa1.93□□□□□ -2.1
KCMF1-201ENST00000409785 KRTAP21-1Q3LI58 79 aa1.9□□□□□ -2.11
KCMF1-201ENST00000409785 MUC16Q8WXI7 14507 aa1.78□□□□□ -2.12
KCMF1-201ENST00000409785 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.78□□□□□ -2.13
KCMF1-201ENST00000409785 AHNAKQ09666 5890 aaKnown RBP1.75□□□□□ -2.13
KCMF1-201ENST00000409785 KRTAP5-7Q6L8G8 165 aa1.69□□□□□ -2.14
Retrieved 77 of 20,778 RNA–protein pairs in 12.5 ms