RNA–Protein interactions for RNA: ENST00000401642.7

SCFD2-202, Transcript of sec1 family domain containing 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCFD2, Length 3,176 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD2-202ENST00000401642 MT1LQ93083 61 aa3.82□□□□□ -1.8
SCFD2-202ENST00000401642 LOC100996750A0A140TA64 210 aa3.8□□□□□ -1.8
SCFD2-202ENST00000401642 SYNE1Q8NF91 8797 aaKnown RBP3.76□□□□□ -1.81
SCFD2-202ENST00000401642 MACF1Q9UPN3 7388 aaKnown RBP3.74□□□□□ -1.81
SCFD2-202ENST00000401642 MT1GP13640 62 aa3.73□□□□□ -1.81
SCFD2-202ENST00000401642 SYNE2Q8WXH0 6885 aaKnown RBP3.73□□□□□ -1.81
SCFD2-202ENST00000401642 KRTAP19-6Q3LI70 58 aa3.71□□□□□ -1.82
SCFD2-202ENST00000401642 OBSCNQ5VST9 7968 aa3.7□□□□□ -1.82
SCFD2-202ENST00000401642 SPRR2FQ96RM1 72 aa3.65□□□□□ -1.82
SCFD2-202ENST00000401642 MDN1Q9NU22 5596 aa3.61□□□□□ -1.83
SCFD2-202ENST00000401642 KRTAP2-3P0C7H8 128 aa3.61□□□□□ -1.83
SCFD2-202ENST00000401642 KRTAP2-4Q9BYR9 128 aa3.61□□□□□ -1.83
SCFD2-202ENST00000401642 KRTAP2-1Q9BYU5 128 aa3.61□□□□□ -1.83
SCFD2-202ENST00000401642 MT1MQ8N339 61 aa3.59□□□□□ -1.84
SCFD2-202ENST00000401642 KRTAP19-3Q7Z4W3 81 aa3.58□□□□□ -1.84
SCFD2-202ENST00000401642 KRTAP9-2Q9BYQ4 174 aa3.55□□□□□ -1.84
SCFD2-202ENST00000401642 LCE3BQ5TA77 95 aa3.49□□□□□ -1.85
SCFD2-202ENST00000401642 KRTAP4-9Q9BYQ8 210 aa3.46□□□□□ -1.86
SCFD2-202ENST00000401642 KRTAP12-4P60329 112 aa3.43□□□□□ -1.86
SCFD2-202ENST00000401642 KRTAP19-4Q3LI73 84 aa3.43□□□□□ -1.86
SCFD2-202ENST00000401642 LCE5AQ5TCM9 118 aa3.42□□□□□ -1.86
SCFD2-202ENST00000401642 KRTAP6-1Q3LI64 71 aa3.31□□□□□ -1.88
SCFD2-202ENST00000401642 KRTAP9-6A0A140TA67 174 aa3.29□□□□□ -1.88
SCFD2-202ENST00000401642 SPRR2EP22531 72 aa3.29□□□□□ -1.88
SCFD2-202ENST00000401642 SPRR2BP35325 72 aa3.29□□□□□ -1.88
SCFD2-202ENST00000401642 SPRR2AP35326 72 aa3.29□□□□□ -1.88
SCFD2-202ENST00000401642 LCE1AQ5T7P2 110 aa3.26□□□□□ -1.89
SCFD2-202ENST00000401642 KRTAP2-2Q9BYT5 123 aa3.25□□□□□ -1.89
SCFD2-202ENST00000401642 LCE1EQ5T753 118 aa3.22□□□□□ -1.89
SCFD2-202ENST00000401642 KRTAP6-3Q3LI67 103 aa3.16□□□□□ -1.9
SCFD2-202ENST00000401642 MT1AP04731 61 aa3.15□□□□□ -1.91
SCFD2-202ENST00000401642 LCE3DQ9BYE3 92 aa3.15□□□□□ -1.91
SCFD2-202ENST00000401642 SPRR2DP22532 72 aa3.13□□□□□ -1.91
SCFD2-202ENST00000401642 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.12□□□□□ -1.91
SCFD2-202ENST00000401642 PRM1P04553 51 aa3.12□□□□□ -1.91
SCFD2-202ENST00000401642 KRTAP9-7A8MTY7 169 aa3.12□□□□□ -1.91
SCFD2-202ENST00000401642 KRTAP5-9P26371 169 aa3.1□□□□□ -1.91
SCFD2-202ENST00000401642 LCE3EQ5T5B0 92 aa3.07□□□□□ -1.92
SCFD2-202ENST00000401642 LCE1DQ5T752 114 aa3.04□□□□□ -1.92
SCFD2-202ENST00000401642 KRTAP5-5Q701N2 237 aaPredicted RBP3.04□□□□□ -1.92
SCFD2-202ENST00000401642 KRTAP6-2Q3LI66 62 aa3.01□□□□□ -1.93
SCFD2-202ENST00000401642 KRTAP9-4Q9BYQ2 154 aa2.98□□□□□ -1.93
SCFD2-202ENST00000401642 LCE1FQ5T754 118 aa2.96□□□□□ -1.94
SCFD2-202ENST00000401642 MT4P47944 62 aa2.91□□□□□ -1.94
SCFD2-202ENST00000401642 MT3P25713 68 aa2.88□□□□□ -1.95
SCFD2-202ENST00000401642 NEBP20929 6669 aa2.87□□□□□ -1.95
SCFD2-202ENST00000401642 KRTAP4-6Q9BYQ5 205 aa2.84□□□□□ -1.96
SCFD2-202ENST00000401642 HMCN1Q96RW7 5635 aa2.72□□□□□ -1.97
SCFD2-202ENST00000401642 MUC19Q7Z5P9 8384 aa2.7□□□□□ -1.98
SCFD2-202ENST00000401642 KRTAP5-4Q6L8H1 288 aa2.65□□□□□ -1.99
SCFD2-202ENST00000401642 KRTAP20-2Q3LI61 65 aa2.62□□□□□ -1.99
SCFD2-202ENST00000401642 KRTAP20-1Q3LI63 56 aa2.62□□□□□ -1.99
SCFD2-202ENST00000401642 LCE1BQ5T7P3 118 aa2.56□□□□□ -2
SCFD2-202ENST00000401642 MUC5ACP98088 5654 aa2.54□□□□□ -2
SCFD2-202ENST00000401642 LCE4AQ5TA78 99 aa2.51□□□□□ -2.01
SCFD2-202ENST00000401642 KRTAP5-2Q701N4 177 aa2.45□□□□□ -2.02
SCFD2-202ENST00000401642 KRTAP5-3Q6L8H2 238 aa2.41□□□□□ -2.02
SCFD2-202ENST00000401642 KRTAP4-11Q9BYQ6 195 aa2.37□□□□□ -2.03
SCFD2-202ENST00000401642 KRTAP4-12Q9BQ66 201 aa2.3□□□□□ -2.04
SCFD2-202ENST00000401642 KRTAP9-9Q9BYP9 154 aa2.28□□□□□ -2.04
SCFD2-202ENST00000401642 KRTAP5-10Q6L8G5 202 aa2.22□□□□□ -2.05
SCFD2-202ENST00000401642 KRTAP4-2Q9BYR5 136 aa2.21□□□□□ -2.06
SCFD2-202ENST00000401642 AHNAK2Q8IVF2 5795 aa2.2□□□□□ -2.06
SCFD2-202ENST00000401642 MUC5BQ9HC84 5762 aaPredicted RBP2.17□□□□□ -2.06
SCFD2-202ENST00000401642 KRTAP5-1Q6L8H4 278 aa2.17□□□□□ -2.06
SCFD2-202ENST00000401642 KRTAP4-4Q9BYR3 166 aa2.17□□□□□ -2.06
SCFD2-202ENST00000401642 GPR98Q8WXG9 6306 aa2.14□□□□□ -2.07
SCFD2-202ENST00000401642 LCE1CQ5T751 118 aa2.12□□□□□ -2.07
SCFD2-202ENST00000401642 KRTAP21-2Q3LI59 83 aa2.06□□□□□ -2.08
SCFD2-202ENST00000401642 KRTAP5-8O75690 187 aa2.05□□□□□ -2.08
SCFD2-202ENST00000401642 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.9□□□□□ -2.1
SCFD2-202ENST00000401642 KRTAP21-1Q3LI58 79 aa1.87□□□□□ -2.11
SCFD2-202ENST00000401642 KRTAP5-7Q6L8G8 165 aa1.87□□□□□ -2.11
SCFD2-202ENST00000401642 KRTAP5-11Q6L8G4 156 aa1.8□□□□□ -2.12
SCFD2-202ENST00000401642 AHNAKQ09666 5890 aaKnown RBP1.69□□□□□ -2.14
SCFD2-202ENST00000401642 PHGR1C9JFL3 82 aa1.6□□□□□ -2.15
SCFD2-202ENST00000401642 MUC16Q8WXI7 14507 aa1.06□□□□□ -2.24
Retrieved 77 of 20,778 RNA–protein pairs in 12.5 ms