RNA–Protein interactions for RNA: ENST00000400075.3

GABPA-202, Transcript of GA binding protein transcription factor subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABPA, Length 4,814 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPA-202ENST00000400075 MUC2Q02817 5179 aa4.88□□□□□ -1.63
GABPA-202ENST00000400075 KRTAP9-7A8MTY7 169 aa4.87□□□□□ -1.63
GABPA-202ENST00000400075 TNXBP22105 4242 aa4.83□□□□□ -1.64
GABPA-202ENST00000400075 MT1EP04732 61 aa4.82□□□□□ -1.64
GABPA-202ENST00000400075 MT1LQ93083 61 aa4.79□□□□□ -1.64
GABPA-202ENST00000400075 SYNE2Q8WXH0 6885 aaKnown RBP4.75□□□□□ -1.65
GABPA-202ENST00000400075 MT4P47944 62 aa4.74□□□□□ -1.65
GABPA-202ENST00000400075 KRTAP20-1Q3LI63 56 aa4.71□□□□□ -1.66
GABPA-202ENST00000400075 MT1MQ8N339 61 aa4.69□□□□□ -1.66
GABPA-202ENST00000400075 KRTAP4-7Q9BYR0 210 aa4.68□□□□□ -1.66
GABPA-202ENST00000400075 KRTAP6-3Q3LI67 103 aa4.67□□□□□ -1.66
GABPA-202ENST00000400075 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.66□□□□□ -1.66
GABPA-202ENST00000400075 LCE3DQ9BYE3 92 aa4.57□□□□□ -1.68
GABPA-202ENST00000400075 KRTAP2-3P0C7H8 128 aa4.54□□□□□ -1.68
GABPA-202ENST00000400075 KRTAP2-4Q9BYR9 128 aa4.54□□□□□ -1.68
GABPA-202ENST00000400075 MT3P25713 68 aa4.53□□□□□ -1.68
GABPA-202ENST00000400075 LCE1AQ5T7P2 110 aa4.52□□□□□ -1.69
GABPA-202ENST00000400075 SPRR5A0A1B0GTR4 108 aa4.48□□□□□ -1.69
GABPA-202ENST00000400075 KRTAP19-7Q3SYF9 63 aa4.48□□□□□ -1.69
GABPA-202ENST00000400075 KRTAP4-3Q9BYR4 195 aa4.48□□□□□ -1.69
GABPA-202ENST00000400075 LCE3EQ5T5B0 92 aa4.46□□□□□ -1.7
GABPA-202ENST00000400075 OBSCNQ5VST9 7968 aa4.41□□□□□ -1.7
GABPA-202ENST00000400075 MACF1Q9UPN3 7388 aaKnown RBP4.4□□□□□ -1.7
GABPA-202ENST00000400075 KRTAP2-2Q9BYT5 123 aa4.4□□□□□ -1.71
GABPA-202ENST00000400075 KRTAP2-1Q9BYU5 128 aa4.4□□□□□ -1.71
GABPA-202ENST00000400075 LOC100996750A0A140TA64 210 aa4.39□□□□□ -1.71
GABPA-202ENST00000400075 KMT2DO14686 5537 aa4.33□□□□□ -1.72
GABPA-202ENST00000400075 LCE1DQ5T752 114 aa4.33□□□□□ -1.72
GABPA-202ENST00000400075 LCE1BQ5T7P3 118 aa4.31□□□□□ -1.72
GABPA-202ENST00000400075 MT1AP04731 61 aa4.3□□□□□ -1.72
GABPA-202ENST00000400075 DSTQ03001 7570 aaKnown RBP4.3□□□□□ -1.72
GABPA-202ENST00000400075 USH2AO75445 5202 aa4.27□□□□□ -1.73
GABPA-202ENST00000400075 LCE4AQ5TA78 99 aa4.24□□□□□ -1.73
GABPA-202ENST00000400075 KRTAP4-9Q9BYQ8 210 aa4.24□□□□□ -1.73
GABPA-202ENST00000400075 LCE5AQ5TCM9 118 aa4.21□□□□□ -1.74
GABPA-202ENST00000400075 FCGBPQ9Y6R7 5405 aaPredicted RBP4.16□□□□□ -1.74
GABPA-202ENST00000400075 GPR98Q8WXG9 6306 aa4.09□□□□□ -1.76
GABPA-202ENST00000400075 NEBP20929 6669 aa4.07□□□□□ -1.76
GABPA-202ENST00000400075 MDN1Q9NU22 5596 aa4.06□□□□□ -1.76
GABPA-202ENST00000400075 KRTAP6-2Q3LI66 62 aa4□□□□□ -1.77
GABPA-202ENST00000400075 KRTAP6-1Q3LI64 71 aa4□□□□□ -1.77
GABPA-202ENST00000400075 SSPOA2VEC9 5147 aa3.97□□□□□ -1.77
GABPA-202ENST00000400075 KRTAP5-9P26371 169 aa3.96□□□□□ -1.78
GABPA-202ENST00000400075 KRTAP9-4Q9BYQ2 154 aa3.95□□□□□ -1.78
GABPA-202ENST00000400075 PRM1P04553 51 aa3.86□□□□□ -1.79
GABPA-202ENST00000400075 KRTAP9-6A8MVA2 160 aa3.82□□□□□ -1.8
GABPA-202ENST00000400075 MUC12Q9UKN1 5478 aa3.81□□□□□ -1.8
GABPA-202ENST00000400075 KRTAP9-9Q9BYP9 154 aa3.72□□□□□ -1.81
GABPA-202ENST00000400075 LCE1CQ5T751 118 aa3.69□□□□□ -1.82
GABPA-202ENST00000400075 LCE1EQ5T753 118 aa3.69□□□□□ -1.82
GABPA-202ENST00000400075 LCE1FQ5T754 118 aa3.69□□□□□ -1.82
GABPA-202ENST00000400075 KRTAP4-6Q9BYQ5 205 aa3.63□□□□□ -1.83
GABPA-202ENST00000400075 MUC19Q7Z5P9 8384 aa3.61□□□□□ -1.83
GABPA-202ENST00000400075 KRTAP20-2Q3LI61 65 aa3.57□□□□□ -1.84
GABPA-202ENST00000400075 KRTAP5-4Q6L8H1 288 aa3.34□□□□□ -1.87
GABPA-202ENST00000400075 KRTAP4-11Q9BYQ6 195 aa3.3□□□□□ -1.88
GABPA-202ENST00000400075 AHNAK2Q8IVF2 5795 aa3.22□□□□□ -1.89
GABPA-202ENST00000400075 KRTAP5-3Q6L8H2 238 aa3.17□□□□□ -1.9
GABPA-202ENST00000400075 MUC5ACP98088 5654 aa3.15□□□□□ -1.91
GABPA-202ENST00000400075 HMCN1Q96RW7 5635 aa3.1□□□□□ -1.91
GABPA-202ENST00000400075 KRTAP4-12Q9BQ66 201 aa3.1□□□□□ -1.91
GABPA-202ENST00000400075 KRTAP4-2Q9BYR5 136 aa3.1□□□□□ -1.91
GABPA-202ENST00000400075 KRTAP5-5Q701N2 237 aaPredicted RBP3.05□□□□□ -1.92
GABPA-202ENST00000400075 KRTAP4-4Q9BYR3 166 aa2.95□□□□□ -1.94
GABPA-202ENST00000400075 KRTAP5-8O75690 187 aa2.83□□□□□ -1.96
GABPA-202ENST00000400075 AHNAKQ09666 5890 aaKnown RBP2.66□□□□□ -1.98
GABPA-202ENST00000400075 KRTAP5-2Q701N4 177 aa2.62□□□□□ -1.99
GABPA-202ENST00000400075 MUC5BQ9HC84 5762 aaPredicted RBP2.52□□□□□ -2.01
GABPA-202ENST00000400075 PHGR1C9JFL3 82 aa2.48□□□□□ -2.01
GABPA-202ENST00000400075 KRTAP5-10Q6L8G5 202 aa2.38□□□□□ -2.03
GABPA-202ENST00000400075 KRTAP5-1Q6L8H4 278 aa2.35□□□□□ -2.03
GABPA-202ENST00000400075 KRTAP5-7Q6L8G8 165 aa2.33□□□□□ -2.04
GABPA-202ENST00000400075 KRTAP5-11Q6L8G4 156 aa2.33□□□□□ -2.04
GABPA-202ENST00000400075 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.1□□□□□ -2.07
GABPA-202ENST00000400075 KRTAP21-2Q3LI59 83 aa2.08□□□□□ -2.08
GABPA-202ENST00000400075 KRTAP21-1Q3LI58 79 aa1.75□□□□□ -2.13
GABPA-202ENST00000400075 MUC16Q8WXI7 14507 aa1.47□□□□□ -2.17
Retrieved 77 of 20,778 RNA–protein pairs in 7.4 ms