RNA–Protein interactions for RNA: ENST00000400068.7

SIRPA-203, Transcript of signal regulatory protein alpha, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SIRPA, Length 4,201 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPA-203ENST00000400068 KRTAP4-3Q9BYR4 195 aa4.58□□□□□ -1.68
SIRPA-203ENST00000400068 LOC100996750A0A140TA64 210 aa4.53□□□□□ -1.68
SIRPA-203ENST00000400068 KRTAP12-4P60329 112 aa4.51□□□□□ -1.69
SIRPA-203ENST00000400068 KRTAP19-6Q3LI70 58 aa4.51□□□□□ -1.69
SIRPA-203ENST00000400068 SSPOA2VEC9 5147 aa4.51□□□□□ -1.69
SIRPA-203ENST00000400068 MUC12Q9UKN1 5478 aa4.5□□□□□ -1.69
SIRPA-203ENST00000400068 KRTAP9-6A8MVA2 160 aa4.45□□□□□ -1.7
SIRPA-203ENST00000400068 KRTAP19-3Q7Z4W3 81 aa4.43□□□□□ -1.7
SIRPA-203ENST00000400068 SYNE2Q8WXH0 6885 aaKnown RBP4.43□□□□□ -1.7
SIRPA-203ENST00000400068 LCE3BQ5TA77 95 aa4.43□□□□□ -1.7
SIRPA-203ENST00000400068 SPRR2EP22531 72 aa4.38□□□□□ -1.71
SIRPA-203ENST00000400068 SPRR2BP35325 72 aa4.38□□□□□ -1.71
SIRPA-203ENST00000400068 SPRR2AP35326 72 aa4.38□□□□□ -1.71
SIRPA-203ENST00000400068 MT1MQ8N339 61 aa4.37□□□□□ -1.71
SIRPA-203ENST00000400068 MUC19Q7Z5P9 8384 aa4.36□□□□□ -1.71
SIRPA-203ENST00000400068 KRTAP9-2Q9BYQ4 174 aa4.34□□□□□ -1.71
SIRPA-203ENST00000400068 KRTAP19-4Q3LI73 84 aa4.32□□□□□ -1.72
SIRPA-203ENST00000400068 MACF1Q9UPN3 7388 aaKnown RBP4.28□□□□□ -1.72
SIRPA-203ENST00000400068 LCE2DQ5TA82 110 aaPredicted RBP4.25□□□□□ -1.73
SIRPA-203ENST00000400068 SPRR2DP22532 72 aa4.18□□□□□ -1.74
SIRPA-203ENST00000400068 KRTAP4-9Q9BYQ8 210 aa4.14□□□□□ -1.75
SIRPA-203ENST00000400068 KRTAP2-3P0C7H8 128 aa4.12□□□□□ -1.75
SIRPA-203ENST00000400068 KRTAP2-4Q9BYR9 128 aa4.12□□□□□ -1.75
SIRPA-203ENST00000400068 KRTAP2-1Q9BYU5 128 aa4.12□□□□□ -1.75
SIRPA-203ENST00000400068 LCE1EQ5T753 118 aa4.11□□□□□ -1.75
SIRPA-203ENST00000400068 PRM1P04553 51 aa4.08□□□□□ -1.76
SIRPA-203ENST00000400068 LCE1AQ5T7P2 110 aa4.07□□□□□ -1.76
SIRPA-203ENST00000400068 LCE5AQ5TCM9 118 aa4.05□□□□□ -1.76
SIRPA-203ENST00000400068 LCE3DQ9BYE3 92 aa4.01□□□□□ -1.77
SIRPA-203ENST00000400068 MDN1Q9NU22 5596 aa3.98□□□□□ -1.77
SIRPA-203ENST00000400068 KRTAP6-1Q3LI64 71 aa3.96□□□□□ -1.78
SIRPA-203ENST00000400068 LCE3EQ5T5B0 92 aa3.9□□□□□ -1.78
SIRPA-203ENST00000400068 MT1AP04731 61 aa3.87□□□□□ -1.79
SIRPA-203ENST00000400068 MT4P47944 62 aa3.86□□□□□ -1.79
SIRPA-203ENST00000400068 KRTAP9-6A0A140TA67 174 aa3.85□□□□□ -1.79
SIRPA-203ENST00000400068 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.81□□□□□ -1.8
SIRPA-203ENST00000400068 LCE1DQ5T752 114 aa3.78□□□□□ -1.8
SIRPA-203ENST00000400068 LCE1FQ5T754 118 aa3.77□□□□□ -1.81
SIRPA-203ENST00000400068 KRTAP2-2Q9BYT5 123 aa3.75□□□□□ -1.81
SIRPA-203ENST00000400068 MT3P25713 68 aa3.72□□□□□ -1.81
SIRPA-203ENST00000400068 KRTAP6-3Q3LI67 103 aa3.72□□□□□ -1.81
SIRPA-203ENST00000400068 KRTAP6-2Q3LI66 62 aa3.71□□□□□ -1.82
SIRPA-203ENST00000400068 KRTAP9-7A8MTY7 169 aa3.7□□□□□ -1.82
SIRPA-203ENST00000400068 KRTAP5-9P26371 169 aa3.66□□□□□ -1.82
SIRPA-203ENST00000400068 KRTAP9-4Q9BYQ2 154 aa3.62□□□□□ -1.83
SIRPA-203ENST00000400068 LCE1BQ5T7P3 118 aa3.47□□□□□ -1.85
SIRPA-203ENST00000400068 KRTAP4-6Q9BYQ5 205 aa3.45□□□□□ -1.86
SIRPA-203ENST00000400068 NEBP20929 6669 aa3.39□□□□□ -1.87
SIRPA-203ENST00000400068 KRTAP5-5Q701N2 237 aaPredicted RBP3.37□□□□□ -1.87
SIRPA-203ENST00000400068 KRTAP20-1Q3LI63 56 aa3.33□□□□□ -1.88
SIRPA-203ENST00000400068 LCE4AQ5TA78 99 aa3.27□□□□□ -1.89
SIRPA-203ENST00000400068 KRTAP20-2Q3LI61 65 aa3.21□□□□□ -1.9
SIRPA-203ENST00000400068 HMCN1Q96RW7 5635 aa3.07□□□□□ -1.92
SIRPA-203ENST00000400068 MUC5ACP98088 5654 aa3.06□□□□□ -1.92
SIRPA-203ENST00000400068 KRTAP4-11Q9BYQ6 195 aa3.05□□□□□ -1.92
SIRPA-203ENST00000400068 KRTAP5-4Q6L8H1 288 aa3.02□□□□□ -1.93
SIRPA-203ENST00000400068 GPR98Q8WXG9 6306 aa2.94□□□□□ -1.94
SIRPA-203ENST00000400068 KRTAP4-4Q9BYR3 166 aa2.76□□□□□ -1.97
SIRPA-203ENST00000400068 KRTAP5-3Q6L8H2 238 aa2.75□□□□□ -1.97
SIRPA-203ENST00000400068 KRTAP9-9Q9BYP9 154 aa2.75□□□□□ -1.97
SIRPA-203ENST00000400068 KRTAP5-2Q701N4 177 aa2.74□□□□□ -1.97
SIRPA-203ENST00000400068 KRTAP4-12Q9BQ66 201 aa2.7□□□□□ -1.98
SIRPA-203ENST00000400068 KRTAP4-2Q9BYR5 136 aa2.7□□□□□ -1.98
SIRPA-203ENST00000400068 LCE1CQ5T751 118 aa2.69□□□□□ -1.98
SIRPA-203ENST00000400068 AHNAK2Q8IVF2 5795 aa2.63□□□□□ -1.99
SIRPA-203ENST00000400068 KRTAP5-10Q6L8G5 202 aa2.52□□□□□ -2.01
SIRPA-203ENST00000400068 KRTAP5-8O75690 187 aa2.49□□□□□ -2.01
SIRPA-203ENST00000400068 MUC5BQ9HC84 5762 aaPredicted RBP2.48□□□□□ -2.01
SIRPA-203ENST00000400068 KRTAP5-1Q6L8H4 278 aa2.47□□□□□ -2.01
SIRPA-203ENST00000400068 KRTAP21-2Q3LI59 83 aa2.31□□□□□ -2.04
SIRPA-203ENST00000400068 AHNAKQ09666 5890 aaKnown RBP2.15□□□□□ -2.07
SIRPA-203ENST00000400068 KRTAP5-11Q6L8G4 156 aa2.14□□□□□ -2.07
SIRPA-203ENST00000400068 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.1□□□□□ -2.07
SIRPA-203ENST00000400068 KRTAP5-7Q6L8G8 165 aa1.99□□□□□ -2.09
SIRPA-203ENST00000400068 KRTAP21-1Q3LI58 79 aa1.97□□□□□ -2.09
SIRPA-203ENST00000400068 PHGR1C9JFL3 82 aa1.86□□□□□ -2.11
SIRPA-203ENST00000400068 MUC16Q8WXI7 14507 aa1.22□□□□□ -2.21
Retrieved 77 of 20,778 RNA–protein pairs in 9.1 ms