RNA–Protein interactions for RNA: ENST00000399848.7

LDLRAD4-203, Transcript of low density lipoprotein receptor class A domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene LDLRAD4, Length 8,633 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD4-203ENST00000399848 KRTAP2-1Q9BYU5 128 aa3.98□□□□□ -1.77
LDLRAD4-203ENST00000399848 LPAP08519 4548 aa3.98□□□□□ -1.77
LDLRAD4-203ENST00000399848 LRP2P98164 4655 aa3.97□□□□□ -1.77
LDLRAD4-203ENST00000399848 LOC100996750A0A140TA64 210 aa3.94□□□□□ -1.78
LDLRAD4-203ENST00000399848 LCE1CQ5T751 118 aa3.94□□□□□ -1.78
LDLRAD4-203ENST00000399848 LCE1EQ5T753 118 aa3.94□□□□□ -1.78
LDLRAD4-203ENST00000399848 LCE1FQ5T754 118 aa3.94□□□□□ -1.78
LDLRAD4-203ENST00000399848 LCE1AQ5T7P2 110 aa3.94□□□□□ -1.78
LDLRAD4-203ENST00000399848 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.9□□□□□ -1.79
LDLRAD4-203ENST00000399848 KRTAP9-9Q9BYP9 154 aa3.87□□□□□ -1.79
LDLRAD4-203ENST00000399848 KRTAP19-2Q3LHN2 52 aa3.85□□□□□ -1.79
LDLRAD4-203ENST00000399848 KRTAP4-3Q9BYR4 195 aa3.82□□□□□ -1.8
LDLRAD4-203ENST00000399848 MT1AP04731 61 aa3.82□□□□□ -1.8
LDLRAD4-203ENST00000399848 KMT2CQ8NEZ4 4911 aaKnown RBP3.74□□□□□ -1.81
LDLRAD4-203ENST00000399848 MUC17Q685J3 4493 aa3.72□□□□□ -1.81
LDLRAD4-203ENST00000399848 KRTAP19-7Q3SYF9 63 aa3.71□□□□□ -1.82
LDLRAD4-203ENST00000399848 KRTAP4-9Q9BYQ8 210 aa3.69□□□□□ -1.82
LDLRAD4-203ENST00000399848 SYNE2Q8WXH0 6885 aaKnown RBP3.67□□□□□ -1.82
LDLRAD4-203ENST00000399848 PCLOQ9Y6V0 5065 aa3.66□□□□□ -1.82
LDLRAD4-203ENST00000399848 RYR2Q92736 4967 aa3.66□□□□□ -1.82
LDLRAD4-203ENST00000399848 LCE2AQ5TA79 106 aaPredicted RBP3.63□□□□□ -1.83
LDLRAD4-203ENST00000399848 KRTAP6-2Q3LI66 62 aa3.62□□□□□ -1.83
LDLRAD4-203ENST00000399848 HERC2O95714 4834 aa3.59□□□□□ -1.83
LDLRAD4-203ENST00000399848 KRTAP9-4Q9BYQ2 154 aa3.52□□□□□ -1.85
LDLRAD4-203ENST00000399848 KRTAP6-1Q3LI64 71 aa3.51□□□□□ -1.85
LDLRAD4-203ENST00000399848 KIAA1109Q2LD37 5005 aa3.49□□□□□ -1.85
LDLRAD4-203ENST00000399848 HYDINQ4G0P3 5121 aa3.48□□□□□ -1.85
LDLRAD4-203ENST00000399848 SYNE1Q8NF91 8797 aaKnown RBP3.47□□□□□ -1.85
LDLRAD4-203ENST00000399848 BIRC6Q9NR09 4857 aa3.43□□□□□ -1.86
LDLRAD4-203ENST00000399848 KRTAP9-6A8MVA2 160 aa3.4□□□□□ -1.86
LDLRAD4-203ENST00000399848 HERC1Q15751 4861 aa3.37□□□□□ -1.87
LDLRAD4-203ENST00000399848 HMCN2Q8NDA2 5059 aa3.36□□□□□ -1.87
LDLRAD4-203ENST00000399848 FSIP2Q5CZC0 6907 aa3.35□□□□□ -1.87
LDLRAD4-203ENST00000399848 EPPK1P58107 5090 aaKnown RBP3.25□□□□□ -1.89
LDLRAD4-203ENST00000399848 MUC2Q02817 5179 aa3.12□□□□□ -1.91
LDLRAD4-203ENST00000399848 UBR4Q5T4S7 5183 aa3.08□□□□□ -1.92
LDLRAD4-203ENST00000399848 RNF213Q63HN8 5207 aa3.06□□□□□ -1.92
LDLRAD4-203ENST00000399848 OBSCNQ5VST9 7968 aa3.05□□□□□ -1.92
LDLRAD4-203ENST00000399848 FAT4Q6V0I7 4981 aa3.01□□□□□ -1.93
LDLRAD4-203ENST00000399848 KRTAP4-11Q9BYQ6 195 aa3□□□□□ -1.93
LDLRAD4-203ENST00000399848 KRTAP5-9P26371 169 aa2.99□□□□□ -1.93
LDLRAD4-203ENST00000399848 KRTAP20-2Q3LI61 65 aa2.98□□□□□ -1.93
LDLRAD4-203ENST00000399848 NEBP20929 6669 aa2.9□□□□□ -1.95
LDLRAD4-203ENST00000399848 ABCA13Q86UQ4 5058 aa2.88□□□□□ -1.95
LDLRAD4-203ENST00000399848 KRTAP5-4Q6L8H1 288 aa2.87□□□□□ -1.95
LDLRAD4-203ENST00000399848 KRTAP4-6Q9BYQ5 205 aa2.86□□□□□ -1.95
LDLRAD4-203ENST00000399848 DSTQ03001 7570 aaKnown RBP2.8□□□□□ -1.96
LDLRAD4-203ENST00000399848 FCGBPQ9Y6R7 5405 aaPredicted RBP2.76□□□□□ -1.97
LDLRAD4-203ENST00000399848 KMT2DO14686 5537 aa2.75□□□□□ -1.97
LDLRAD4-203ENST00000399848 KRTAP4-12Q9BQ66 201 aa2.7□□□□□ -1.98
LDLRAD4-203ENST00000399848 KRTAP4-2Q9BYR5 136 aa2.7□□□□□ -1.98
LDLRAD4-203ENST00000399848 KRTAP4-4Q9BYR3 166 aa2.69□□□□□ -1.98
LDLRAD4-203ENST00000399848 MACF1Q9UPN3 7388 aaKnown RBP2.65□□□□□ -1.98
LDLRAD4-203ENST00000399848 USH2AO75445 5202 aa2.56□□□□□ -2
LDLRAD4-203ENST00000399848 KRTAP5-5Q701N2 237 aaPredicted RBP2.56□□□□□ -2
LDLRAD4-203ENST00000399848 GPR98Q8WXG9 6306 aa2.55□□□□□ -2
LDLRAD4-203ENST00000399848 PHGR1C9JFL3 82 aa2.53□□□□□ -2
LDLRAD4-203ENST00000399848 KRTAP5-3Q6L8H2 238 aa2.51□□□□□ -2.01
LDLRAD4-203ENST00000399848 MDN1Q9NU22 5596 aa2.48□□□□□ -2.01
LDLRAD4-203ENST00000399848 MUC19Q7Z5P9 8384 aa2.48□□□□□ -2.01
LDLRAD4-203ENST00000399848 MUC12Q9UKN1 5478 aa2.43□□□□□ -2.02
LDLRAD4-203ENST00000399848 MUC5ACP98088 5654 aa2.42□□□□□ -2.02
LDLRAD4-203ENST00000399848 SSPOA2VEC9 5147 aa2.36□□□□□ -2.03
LDLRAD4-203ENST00000399848 KRTAP5-8O75690 187 aa2.2□□□□□ -2.06
LDLRAD4-203ENST00000399848 AHNAK2Q8IVF2 5795 aa2.19□□□□□ -2.06
LDLRAD4-203ENST00000399848 KRTAP5-10Q6L8G5 202 aa2.08□□□□□ -2.08
LDLRAD4-203ENST00000399848 MUC5BQ9HC84 5762 aaPredicted RBP2.02□□□□□ -2.09
LDLRAD4-203ENST00000399848 HMCN1Q96RW7 5635 aa1.96□□□□□ -2.1
LDLRAD4-203ENST00000399848 KRTAP21-1Q3LI58 79 aa1.91□□□□□ -2.1
LDLRAD4-203ENST00000399848 KRTAP5-2Q701N4 177 aa1.89□□□□□ -2.11
LDLRAD4-203ENST00000399848 KRTAP5-7Q6L8G8 165 aa1.85□□□□□ -2.11
LDLRAD4-203ENST00000399848 KRTAP5-11Q6L8G4 156 aa1.85□□□□□ -2.11
LDLRAD4-203ENST00000399848 KRTAP5-1Q6L8H4 278 aa1.8□□□□□ -2.12
LDLRAD4-203ENST00000399848 AHNAKQ09666 5890 aaKnown RBP1.77□□□□□ -2.13
LDLRAD4-203ENST00000399848 KRTAP21-2Q3LI59 83 aa1.75□□□□□ -2.13
LDLRAD4-203ENST00000399848 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.6□□□□□ -2.15
LDLRAD4-203ENST00000399848 MUC16Q8WXI7 14507 aa1.41□□□□□ -2.18
Retrieved 77 of 20,778 RNA–protein pairs in 11.9 ms