RNA–Protein interactions for RNA: ENST00000399606.5

CACNA1C-210, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,571 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-210ENST00000399606 LCE4AQ5TA78 99 aa3.53□□□□□ -1.84
CACNA1C-210ENST00000399606 MT3P25713 68 aa3.53□□□□□ -1.85
CACNA1C-210ENST00000399606 PCLOQ9Y6V0 5065 aa3.5□□□□□ -1.85
CACNA1C-210ENST00000399606 KRTAP4-7Q9BYR0 210 aa3.49□□□□□ -1.85
CACNA1C-210ENST00000399606 LCE1CQ5T751 118 aa3.48□□□□□ -1.85
CACNA1C-210ENST00000399606 LCE1EQ5T753 118 aa3.48□□□□□ -1.85
CACNA1C-210ENST00000399606 LCE1FQ5T754 118 aa3.48□□□□□ -1.85
CACNA1C-210ENST00000399606 LCE1AQ5T7P2 110 aa3.48□□□□□ -1.85
CACNA1C-210ENST00000399606 FLGP20930 4061 aaPredicted RBP3.46□□□□□ -1.86
CACNA1C-210ENST00000399606 KRTAP2-3P0C7H8 128 aa3.43□□□□□ -1.86
CACNA1C-210ENST00000399606 KRTAP2-4Q9BYR9 128 aa3.43□□□□□ -1.86
CACNA1C-210ENST00000399606 KRTAP2-1Q9BYU5 128 aa3.43□□□□□ -1.86
CACNA1C-210ENST00000399606 EPPK1P58107 5090 aaKnown RBP3.43□□□□□ -1.86
CACNA1C-210ENST00000399606 LOC100996750A0A140TA64 210 aa3.41□□□□□ -1.86
CACNA1C-210ENST00000399606 MT1LQ93083 61 aa3.4□□□□□ -1.86
CACNA1C-210ENST00000399606 ABCA13Q86UQ4 5058 aa3.4□□□□□ -1.87
CACNA1C-210ENST00000399606 MT1EP04732 61 aa3.38□□□□□ -1.87
CACNA1C-210ENST00000399606 MT1MQ8N339 61 aa3.36□□□□□ -1.87
CACNA1C-210ENST00000399606 KRTAP4-9Q9BYQ8 210 aa3.35□□□□□ -1.87
CACNA1C-210ENST00000399606 FSIP2Q5CZC0 6907 aa3.32□□□□□ -1.88
CACNA1C-210ENST00000399606 KRTAP4-3Q9BYR4 195 aa3.3□□□□□ -1.88
CACNA1C-210ENST00000399606 SYNE1Q8NF91 8797 aaKnown RBP3.28□□□□□ -1.88
CACNA1C-210ENST00000399606 KRTAP6-3Q3LI67 103 aa3.23□□□□□ -1.89
CACNA1C-210ENST00000399606 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.23□□□□□ -1.89
CACNA1C-210ENST00000399606 SYNE2Q8WXH0 6885 aaKnown RBP3.23□□□□□ -1.89
CACNA1C-210ENST00000399606 KRTAP2-2Q9BYT5 123 aa3.22□□□□□ -1.89
CACNA1C-210ENST00000399606 HMCN2Q8NDA2 5059 aa3.22□□□□□ -1.89
CACNA1C-210ENST00000399606 RNF213Q63HN8 5207 aa3.22□□□□□ -1.89
CACNA1C-210ENST00000399606 KRTAP19-7Q3SYF9 63 aa3.21□□□□□ -1.9
CACNA1C-210ENST00000399606 MUC2Q02817 5179 aa3.2□□□□□ -1.9
CACNA1C-210ENST00000399606 OBSCNQ5VST9 7968 aa3.17□□□□□ -1.9
CACNA1C-210ENST00000399606 LCE2AQ5TA79 106 aaPredicted RBP3.14□□□□□ -1.91
CACNA1C-210ENST00000399606 KRTAP9-6A8MVA2 160 aa3.11□□□□□ -1.91
CACNA1C-210ENST00000399606 MT1AP04731 61 aa3.11□□□□□ -1.91
CACNA1C-210ENST00000399606 KRTAP9-9Q9BYP9 154 aa3.09□□□□□ -1.91
CACNA1C-210ENST00000399606 UBR4Q5T4S7 5183 aa3.09□□□□□ -1.92
CACNA1C-210ENST00000399606 FAT4Q6V0I7 4981 aa3.08□□□□□ -1.92
CACNA1C-210ENST00000399606 KRTAP6-2Q3LI66 62 aa3.03□□□□□ -1.92
CACNA1C-210ENST00000399606 KMT2DO14686 5537 aa2.93□□□□□ -1.94
CACNA1C-210ENST00000399606 KRTAP9-4Q9BYQ2 154 aa2.92□□□□□ -1.94
CACNA1C-210ENST00000399606 KRTAP20-2Q3LI61 65 aa2.92□□□□□ -1.94
CACNA1C-210ENST00000399606 KRTAP6-1Q3LI64 71 aa2.88□□□□□ -1.95
CACNA1C-210ENST00000399606 DSTQ03001 7570 aaKnown RBP2.78□□□□□ -1.97
CACNA1C-210ENST00000399606 FCGBPQ9Y6R7 5405 aaPredicted RBP2.77□□□□□ -1.97
CACNA1C-210ENST00000399606 KRTAP4-11Q9BYQ6 195 aa2.75□□□□□ -1.97
CACNA1C-210ENST00000399606 USH2AO75445 5202 aa2.75□□□□□ -1.97
CACNA1C-210ENST00000399606 KRTAP4-4Q9BYR3 166 aa2.7□□□□□ -1.98
CACNA1C-210ENST00000399606 KRTAP4-6Q9BYQ5 205 aa2.64□□□□□ -1.99
CACNA1C-210ENST00000399606 MACF1Q9UPN3 7388 aaKnown RBP2.62□□□□□ -1.99
CACNA1C-210ENST00000399606 KRTAP4-12Q9BQ66 201 aa2.61□□□□□ -1.99
CACNA1C-210ENST00000399606 KRTAP4-2Q9BYR5 136 aa2.61□□□□□ -1.99
CACNA1C-210ENST00000399606 MUC19Q7Z5P9 8384 aa2.56□□□□□ -2
CACNA1C-210ENST00000399606 SSPOA2VEC9 5147 aa2.53□□□□□ -2
CACNA1C-210ENST00000399606 KRTAP5-9P26371 169 aa2.52□□□□□ -2.01
CACNA1C-210ENST00000399606 KRTAP5-5Q701N2 237 aaPredicted RBP2.49□□□□□ -2.01
CACNA1C-210ENST00000399606 NEBP20929 6669 aa2.43□□□□□ -2.02
CACNA1C-210ENST00000399606 MUC12Q9UKN1 5478 aa2.37□□□□□ -2.03
CACNA1C-210ENST00000399606 MDN1Q9NU22 5596 aa2.34□□□□□ -2.04
CACNA1C-210ENST00000399606 KRTAP5-4Q6L8H1 288 aa2.28□□□□□ -2.04
CACNA1C-210ENST00000399606 GPR98Q8WXG9 6306 aa2.2□□□□□ -2.06
CACNA1C-210ENST00000399606 PHGR1C9JFL3 82 aa2.13□□□□□ -2.07
CACNA1C-210ENST00000399606 KRTAP5-3Q6L8H2 238 aa2.08□□□□□ -2.08
CACNA1C-210ENST00000399606 AHNAK2Q8IVF2 5795 aa1.95□□□□□ -2.1
CACNA1C-210ENST00000399606 KRTAP5-10Q6L8G5 202 aa1.92□□□□□ -2.1
CACNA1C-210ENST00000399606 KRTAP5-2Q701N4 177 aa1.91□□□□□ -2.1
CACNA1C-210ENST00000399606 KRTAP5-8O75690 187 aa1.9□□□□□ -2.11
CACNA1C-210ENST00000399606 HMCN1Q96RW7 5635 aa1.89□□□□□ -2.11
CACNA1C-210ENST00000399606 MUC5ACP98088 5654 aa1.87□□□□□ -2.11
CACNA1C-210ENST00000399606 KRTAP5-1Q6L8H4 278 aa1.74□□□□□ -2.13
CACNA1C-210ENST00000399606 KRTAP21-1Q3LI58 79 aa1.72□□□□□ -2.13
CACNA1C-210ENST00000399606 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.69□□□□□ -2.14
CACNA1C-210ENST00000399606 AHNAKQ09666 5890 aaKnown RBP1.62□□□□□ -2.15
CACNA1C-210ENST00000399606 KRTAP5-11Q6L8G4 156 aa1.62□□□□□ -2.15
CACNA1C-210ENST00000399606 KRTAP21-2Q3LI59 83 aa1.6□□□□□ -2.15
CACNA1C-210ENST00000399606 KRTAP5-7Q6L8G8 165 aa1.56□□□□□ -2.16
CACNA1C-210ENST00000399606 MUC5BQ9HC84 5762 aaPredicted RBP1.5□□□□□ -2.17
CACNA1C-210ENST00000399606 MUC16Q8WXI7 14507 aa1.1□□□□□ -2.23
Retrieved 77 of 20,778 RNA–protein pairs in 31 ms