RNA–Protein interactions for RNA: ENST00000399595.5

CACNA1C-206, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,535 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-206ENST00000399595 KRTAP9-3Q9BYQ3 159 aa3.62□□□□□ -1.83
CACNA1C-206ENST00000399595 HERC1Q15751 4861 aa3.6□□□□□ -1.83
CACNA1C-206ENST00000399595 KRTAP4-7Q9BYR0 210 aa3.6□□□□□ -1.83
CACNA1C-206ENST00000399595 LCE4AQ5TA78 99 aa3.57□□□□□ -1.84
CACNA1C-206ENST00000399595 MT3P25713 68 aa3.56□□□□□ -1.84
CACNA1C-206ENST00000399595 KRTAP19-6Q3LI70 58 aa3.56□□□□□ -1.84
CACNA1C-206ENST00000399595 MUC17Q685J3 4493 aa3.55□□□□□ -1.84
CACNA1C-206ENST00000399595 LCE1CQ5T751 118 aa3.54□□□□□ -1.84
CACNA1C-206ENST00000399595 LCE1EQ5T753 118 aa3.54□□□□□ -1.84
CACNA1C-206ENST00000399595 LCE1FQ5T754 118 aa3.54□□□□□ -1.84
CACNA1C-206ENST00000399595 LCE1AQ5T7P2 110 aa3.54□□□□□ -1.84
CACNA1C-206ENST00000399595 LOC100996750A0A140TA64 210 aa3.51□□□□□ -1.85
CACNA1C-206ENST00000399595 KRTAP2-3P0C7H8 128 aa3.48□□□□□ -1.85
CACNA1C-206ENST00000399595 KRTAP2-4Q9BYR9 128 aa3.48□□□□□ -1.85
CACNA1C-206ENST00000399595 KRTAP19-2Q3LHN2 52 aa3.47□□□□□ -1.85
CACNA1C-206ENST00000399595 UBR4Q5T4S7 5183 aa3.46□□□□□ -1.86
CACNA1C-206ENST00000399595 OBSCNQ5VST9 7968 aa3.44□□□□□ -1.86
CACNA1C-206ENST00000399595 FLGP20930 4061 aaPredicted RBP3.43□□□□□ -1.86
CACNA1C-206ENST00000399595 MT1LQ93083 61 aa3.4□□□□□ -1.86
CACNA1C-206ENST00000399595 MT1EP04732 61 aa3.4□□□□□ -1.87
CACNA1C-206ENST00000399595 HMCN2Q8NDA2 5059 aa3.4□□□□□ -1.87
CACNA1C-206ENST00000399595 KRTAP4-9Q9BYQ8 210 aa3.39□□□□□ -1.87
CACNA1C-206ENST00000399595 MT1MQ8N339 61 aa3.37□□□□□ -1.87
CACNA1C-206ENST00000399595 KRTAP4-3Q9BYR4 195 aa3.36□□□□□ -1.87
CACNA1C-206ENST00000399595 KRTAP6-3Q3LI67 103 aa3.34□□□□□ -1.87
CACNA1C-206ENST00000399595 MUC2Q02817 5179 aa3.34□□□□□ -1.87
CACNA1C-206ENST00000399595 LCE2AQ5TA79 106 aaPredicted RBP3.32□□□□□ -1.88
CACNA1C-206ENST00000399595 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.32□□□□□ -1.88
CACNA1C-206ENST00000399595 RNF213Q63HN8 5207 aa3.31□□□□□ -1.88
CACNA1C-206ENST00000399595 KRTAP2-2Q9BYT5 123 aa3.31□□□□□ -1.88
CACNA1C-206ENST00000399595 KRTAP2-1Q9BYU5 128 aa3.31□□□□□ -1.88
CACNA1C-206ENST00000399595 FAT4Q6V0I7 4981 aa3.24□□□□□ -1.89
CACNA1C-206ENST00000399595 SYNE2Q8WXH0 6885 aaKnown RBP3.17□□□□□ -1.9
CACNA1C-206ENST00000399595 MACF1Q9UPN3 7388 aaKnown RBP3.13□□□□□ -1.91
CACNA1C-206ENST00000399595 MT1AP04731 61 aa3.13□□□□□ -1.91
CACNA1C-206ENST00000399595 DSTQ03001 7570 aaKnown RBP3.12□□□□□ -1.91
CACNA1C-206ENST00000399595 KRTAP6-2Q3LI66 62 aa3.12□□□□□ -1.91
CACNA1C-206ENST00000399595 KRTAP9-9Q9BYP9 154 aa3.12□□□□□ -1.91
CACNA1C-206ENST00000399595 FCGBPQ9Y6R7 5405 aaPredicted RBP3.05□□□□□ -1.92
CACNA1C-206ENST00000399595 KRTAP20-2Q3LI61 65 aa2.95□□□□□ -1.94
CACNA1C-206ENST00000399595 KRTAP19-7Q3SYF9 63 aa2.94□□□□□ -1.94
CACNA1C-206ENST00000399595 USH2AO75445 5202 aa2.94□□□□□ -1.94
CACNA1C-206ENST00000399595 KRTAP9-4Q9BYQ2 154 aa2.93□□□□□ -1.94
CACNA1C-206ENST00000399595 KMT2DO14686 5537 aa2.93□□□□□ -1.94
CACNA1C-206ENST00000399595 KRTAP9-6A8MVA2 160 aa2.9□□□□□ -1.95
CACNA1C-206ENST00000399595 KRTAP6-1Q3LI64 71 aa2.87□□□□□ -1.95
CACNA1C-206ENST00000399595 KRTAP4-11Q9BYQ6 195 aa2.84□□□□□ -1.96
CACNA1C-206ENST00000399595 MUC19Q7Z5P9 8384 aa2.79□□□□□ -1.96
CACNA1C-206ENST00000399595 KRTAP4-4Q9BYR3 166 aa2.74□□□□□ -1.97
CACNA1C-206ENST00000399595 MDN1Q9NU22 5596 aa2.73□□□□□ -1.97
CACNA1C-206ENST00000399595 SSPOA2VEC9 5147 aa2.66□□□□□ -1.98
CACNA1C-206ENST00000399595 KRTAP4-6Q9BYQ5 205 aa2.66□□□□□ -1.98
CACNA1C-206ENST00000399595 KRTAP4-12Q9BQ66 201 aa2.64□□□□□ -1.99
CACNA1C-206ENST00000399595 KRTAP4-2Q9BYR5 136 aa2.64□□□□□ -1.99
CACNA1C-206ENST00000399595 KRTAP5-9P26371 169 aa2.63□□□□□ -1.99
CACNA1C-206ENST00000399595 GPR98Q8WXG9 6306 aa2.61□□□□□ -1.99
CACNA1C-206ENST00000399595 MUC12Q9UKN1 5478 aa2.6□□□□□ -1.99
CACNA1C-206ENST00000399595 NEBP20929 6669 aa2.59□□□□□ -2
CACNA1C-206ENST00000399595 KRTAP5-5Q701N2 237 aaPredicted RBP2.41□□□□□ -2.02
CACNA1C-206ENST00000399595 KRTAP5-4Q6L8H1 288 aa2.34□□□□□ -2.04
CACNA1C-206ENST00000399595 MUC5ACP98088 5654 aa2.17□□□□□ -2.06
CACNA1C-206ENST00000399595 HMCN1Q96RW7 5635 aa2.16□□□□□ -2.06
CACNA1C-206ENST00000399595 KRTAP5-3Q6L8H2 238 aa2.16□□□□□ -2.06
CACNA1C-206ENST00000399595 PHGR1C9JFL3 82 aa2.14□□□□□ -2.07
CACNA1C-206ENST00000399595 AHNAK2Q8IVF2 5795 aa2.02□□□□□ -2.09
CACNA1C-206ENST00000399595 KRTAP5-8O75690 187 aa1.94□□□□□ -2.1
CACNA1C-206ENST00000399595 KRTAP5-2Q701N4 177 aa1.91□□□□□ -2.1
CACNA1C-206ENST00000399595 KRTAP5-10Q6L8G5 202 aa1.78□□□□□ -2.12
CACNA1C-206ENST00000399595 KRTAP21-1Q3LI58 79 aa1.74□□□□□ -2.13
CACNA1C-206ENST00000399595 AHNAKQ09666 5890 aaKnown RBP1.69□□□□□ -2.14
CACNA1C-206ENST00000399595 KRTAP5-1Q6L8H4 278 aa1.62□□□□□ -2.15
CACNA1C-206ENST00000399595 MUC5BQ9HC84 5762 aaPredicted RBP1.6□□□□□ -2.15
CACNA1C-206ENST00000399595 KRTAP5-7Q6L8G8 165 aa1.59□□□□□ -2.16
CACNA1C-206ENST00000399595 KRTAP5-11Q6L8G4 156 aa1.56□□□□□ -2.16
CACNA1C-206ENST00000399595 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.56□□□□□ -2.16
CACNA1C-206ENST00000399595 KRTAP21-2Q3LI59 83 aa1.41□□□□□ -2.18
CACNA1C-206ENST00000399595 MUC16Q8WXI7 14507 aa1.15□□□□□ -2.23
Retrieved 77 of 20,778 RNA–protein pairs in 37.7 ms