RNA–Protein interactions for RNA: ENST00000398868.7

ATL3-201, Transcript of atlastin GTPase 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ATL3, Length 7,135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-201ENST00000398868 RYR2Q92736 4967 aa2.93□□□□□ -1.94
ATL3-201ENST00000398868 MT1LQ93083 61 aa2.93□□□□□ -1.94
ATL3-201ENST00000398868 MUC17Q685J3 4493 aa2.92□□□□□ -1.94
ATL3-201ENST00000398868 KRTAP19-6Q3LI70 58 aa2.91□□□□□ -1.94
ATL3-201ENST00000398868 MT1EP04732 61 aa2.91□□□□□ -1.94
ATL3-201ENST00000398868 LCE5AQ5TCM9 118 aa2.89□□□□□ -1.95
ATL3-201ENST00000398868 MT1MQ8N339 61 aa2.86□□□□□ -1.95
ATL3-201ENST00000398868 KRTAP20-1Q3LI63 56 aa2.82□□□□□ -1.96
ATL3-201ENST00000398868 KRTAP9-7A8MTY7 169 aa2.81□□□□□ -1.96
ATL3-201ENST00000398868 HERC1Q15751 4861 aa2.81□□□□□ -1.96
ATL3-201ENST00000398868 KRTAP19-2Q3LHN2 52 aa2.8□□□□□ -1.96
ATL3-201ENST00000398868 MT3P25713 68 aa2.79□□□□□ -1.96
ATL3-201ENST00000398868 EPPK1P58107 5090 aaKnown RBP2.75□□□□□ -1.97
ATL3-201ENST00000398868 ABCA13Q86UQ4 5058 aa2.74□□□□□ -1.97
ATL3-201ENST00000398868 HMCN2Q8NDA2 5059 aa2.73□□□□□ -1.97
ATL3-201ENST00000398868 LCE1CQ5T751 118 aa2.72□□□□□ -1.97
ATL3-201ENST00000398868 LCE1EQ5T753 118 aa2.72□□□□□ -1.97
ATL3-201ENST00000398868 LCE1FQ5T754 118 aa2.72□□□□□ -1.97
ATL3-201ENST00000398868 LCE1AQ5T7P2 110 aa2.72□□□□□ -1.97
ATL3-201ENST00000398868 MUC2Q02817 5179 aa2.72□□□□□ -1.97
ATL3-201ENST00000398868 KRTAP6-2Q3LI66 62 aa2.64□□□□□ -1.99
ATL3-201ENST00000398868 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.63□□□□□ -1.99
ATL3-201ENST00000398868 FAT4Q6V0I7 4981 aa2.62□□□□□ -1.99
ATL3-201ENST00000398868 LCE2AQ5TA79 106 aaPredicted RBP2.62□□□□□ -1.99
ATL3-201ENST00000398868 UBR4Q5T4S7 5183 aa2.6□□□□□ -1.99
ATL3-201ENST00000398868 KRTAP2-3P0C7H8 128 aa2.6□□□□□ -1.99
ATL3-201ENST00000398868 KRTAP2-4Q9BYR9 128 aa2.6□□□□□ -1.99
ATL3-201ENST00000398868 KRTAP2-1Q9BYU5 128 aa2.6□□□□□ -1.99
ATL3-201ENST00000398868 KRTAP19-7Q3SYF9 63 aa2.6□□□□□ -1.99
ATL3-201ENST00000398868 KMT2DO14686 5537 aa2.59□□□□□ -2
ATL3-201ENST00000398868 KRTAP6-1Q3LI64 71 aa2.59□□□□□ -2
ATL3-201ENST00000398868 SYNE1Q8NF91 8797 aaKnown RBP2.55□□□□□ -2
ATL3-201ENST00000398868 MT1AP04731 61 aa2.52□□□□□ -2.01
ATL3-201ENST00000398868 DSTQ03001 7570 aaKnown RBP2.51□□□□□ -2.01
ATL3-201ENST00000398868 RNF213Q63HN8 5207 aa2.51□□□□□ -2.01
ATL3-201ENST00000398868 LCE4AQ5TA78 99 aa2.5□□□□□ -2.01
ATL3-201ENST00000398868 GPR98Q8WXG9 6306 aa2.47□□□□□ -2.01
ATL3-201ENST00000398868 KRTAP6-3Q3LI67 103 aa2.47□□□□□ -2.01
ATL3-201ENST00000398868 KRTAP9-6A8MVA2 160 aa2.47□□□□□ -2.01
ATL3-201ENST00000398868 KRTAP2-2Q9BYT5 123 aa2.46□□□□□ -2.02
ATL3-201ENST00000398868 OBSCNQ5VST9 7968 aa2.44□□□□□ -2.02
ATL3-201ENST00000398868 KRTAP9-4Q9BYQ2 154 aa2.42□□□□□ -2.02
ATL3-201ENST00000398868 NEBP20929 6669 aa2.42□□□□□ -2.02
ATL3-201ENST00000398868 FCGBPQ9Y6R7 5405 aaPredicted RBP2.41□□□□□ -2.02
ATL3-201ENST00000398868 KRTAP4-6Q9BYQ5 205 aa2.34□□□□□ -2.04
ATL3-201ENST00000398868 MACF1Q9UPN3 7388 aaKnown RBP2.34□□□□□ -2.04
ATL3-201ENST00000398868 KRTAP9-9Q9BYP9 154 aa2.33□□□□□ -2.04
ATL3-201ENST00000398868 KRTAP4-11Q9BYQ6 195 aa2.32□□□□□ -2.04
ATL3-201ENST00000398868 KRTAP4-4Q9BYR3 166 aa2.3□□□□□ -2.04
ATL3-201ENST00000398868 KRTAP4-12Q9BQ66 201 aa2.29□□□□□ -2.04
ATL3-201ENST00000398868 KRTAP4-2Q9BYR5 136 aa2.29□□□□□ -2.04
ATL3-201ENST00000398868 KRTAP20-2Q3LI61 65 aa2.25□□□□□ -2.05
ATL3-201ENST00000398868 USH2AO75445 5202 aa2.24□□□□□ -2.05
ATL3-201ENST00000398868 SSPOA2VEC9 5147 aa2.2□□□□□ -2.06
ATL3-201ENST00000398868 MUC12Q9UKN1 5478 aa2.1□□□□□ -2.07
ATL3-201ENST00000398868 KRTAP5-9P26371 169 aa2.03□□□□□ -2.09
ATL3-201ENST00000398868 HMCN1Q96RW7 5635 aa2□□□□□ -2.09
ATL3-201ENST00000398868 AHNAKQ09666 5890 aaKnown RBP1.97□□□□□ -2.09
ATL3-201ENST00000398868 AHNAK2Q8IVF2 5795 aa1.97□□□□□ -2.09
ATL3-201ENST00000398868 MUC19Q7Z5P9 8384 aa1.97□□□□□ -2.09
ATL3-201ENST00000398868 MDN1Q9NU22 5596 aa1.95□□□□□ -2.1
ATL3-201ENST00000398868 KRTAP5-5Q701N2 237 aaPredicted RBP1.89□□□□□ -2.11
ATL3-201ENST00000398868 MUC5BQ9HC84 5762 aaPredicted RBP1.82□□□□□ -2.12
ATL3-201ENST00000398868 KRTAP5-4Q6L8H1 288 aa1.78□□□□□ -2.12
ATL3-201ENST00000398868 KRTAP5-3Q6L8H2 238 aa1.7□□□□□ -2.14
ATL3-201ENST00000398868 MUC5ACP98088 5654 aa1.69□□□□□ -2.14
ATL3-201ENST00000398868 PHGR1C9JFL3 82 aa1.65□□□□□ -2.15
ATL3-201ENST00000398868 KRTAP5-7Q6L8G8 165 aa1.65□□□□□ -2.15
ATL3-201ENST00000398868 KRTAP5-8O75690 187 aa1.63□□□□□ -2.15
ATL3-201ENST00000398868 KRTAP5-10Q6L8G5 202 aa1.52□□□□□ -2.17
ATL3-201ENST00000398868 KRTAP5-2Q701N4 177 aa1.47□□□□□ -2.17
ATL3-201ENST00000398868 KRTAP5-1Q6L8H4 278 aa1.3□□□□□ -2.2
ATL3-201ENST00000398868 KRTAP21-1Q3LI58 79 aa1.28□□□□□ -2.2
ATL3-201ENST00000398868 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.26□□□□□ -2.21
ATL3-201ENST00000398868 KRTAP5-11Q6L8G4 156 aa1.25□□□□□ -2.21
ATL3-201ENST00000398868 KRTAP21-2Q3LI59 83 aa1.18□□□□□ -2.22
ATL3-201ENST00000398868 MUC16Q8WXI7 14507 aa0.95□□□□□ -2.26
Retrieved 77 of 20,778 RNA–protein pairs in 136.4 ms