RNA–Protein interactions for RNA: ENST00000397661.6

NFIX-203, Transcript of nuclear factor I X, humanhuman

TSL 5 BASIC

Gene NFIX, Length 3,143 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIX-203ENST00000397661 MT1EP04732 61 aa7.47□□□□□ -1.21
NFIX-203ENST00000397661 KRTAP4-3Q9BYR4 195 aa7.44□□□□□ -1.22
NFIX-203ENST00000397661 LOC100996750A0A140TA64 210 aa7.42□□□□□ -1.22
NFIX-203ENST00000397661 KRTAP2-3P0C7H8 128 aa7.37□□□□□ -1.23
NFIX-203ENST00000397661 KRTAP2-4Q9BYR9 128 aa7.37□□□□□ -1.23
NFIX-203ENST00000397661 KRTAP2-1Q9BYU5 128 aa7.37□□□□□ -1.23
NFIX-203ENST00000397661 MT1GP13640 62 aa7.26□□□□□ -1.25
NFIX-203ENST00000397661 KRTAP19-6Q3LI70 58 aa7.18□□□□□ -1.26
NFIX-203ENST00000397661 LCE2DQ5TA82 110 aaPredicted RBP7.16□□□□□ -1.26
NFIX-203ENST00000397661 SYNE2Q8WXH0 6885 aaKnown RBP7.11□□□□□ -1.27
NFIX-203ENST00000397661 MACF1Q9UPN3 7388 aaKnown RBP7.05□□□□□ -1.28
NFIX-203ENST00000397661 MT1MQ8N339 61 aa7.01□□□□□ -1.29
NFIX-203ENST00000397661 KRTAP19-3Q7Z4W3 81 aa6.98□□□□□ -1.29
NFIX-203ENST00000397661 SPRR2FQ96RM1 72 aa6.97□□□□□ -1.29
NFIX-203ENST00000397661 KRTAP4-9Q9BYQ8 210 aa6.92□□□□□ -1.3
NFIX-203ENST00000397661 KRTAP19-4Q3LI73 84 aa6.89□□□□□ -1.31
NFIX-203ENST00000397661 KRTAP12-4P60329 112 aa6.87□□□□□ -1.31
NFIX-203ENST00000397661 MDN1Q9NU22 5596 aa6.83□□□□□ -1.32
NFIX-203ENST00000397661 LCE3BQ5TA77 95 aa6.83□□□□□ -1.32
NFIX-203ENST00000397661 LCE5AQ5TCM9 118 aa6.67□□□□□ -1.34
NFIX-203ENST00000397661 KRTAP6-1Q3LI64 71 aa6.47□□□□□ -1.37
NFIX-203ENST00000397661 KRTAP9-7A8MTY7 169 aa6.31□□□□□ -1.4
NFIX-203ENST00000397661 LCE1AQ5T7P2 110 aa6.28□□□□□ -1.4
NFIX-203ENST00000397661 SPRR2EP22531 72 aa6.26□□□□□ -1.41
NFIX-203ENST00000397661 SPRR2BP35325 72 aa6.26□□□□□ -1.41
NFIX-203ENST00000397661 SPRR2AP35326 72 aa6.26□□□□□ -1.41
NFIX-203ENST00000397661 KRTAP9-2Q9BYQ4 174 aa6.25□□□□□ -1.41
NFIX-203ENST00000397661 LCE3DQ9BYE3 92 aa6.21□□□□□ -1.42
NFIX-203ENST00000397661 MT1AP04731 61 aa6.19□□□□□ -1.42
NFIX-203ENST00000397661 PRM1P04553 51 aa6.14□□□□□ -1.43
NFIX-203ENST00000397661 LCE3EQ5T5B0 92 aa6.1□□□□□ -1.43
NFIX-203ENST00000397661 KRTAP5-5Q701N2 237 aaPredicted RBP6.04□□□□□ -1.44
NFIX-203ENST00000397661 KRTAP5-9P26371 169 aa6□□□□□ -1.45
NFIX-203ENST00000397661 SPRR2DP22532 72 aa5.94□□□□□ -1.46
NFIX-203ENST00000397661 KRTAP9-4Q9BYQ2 154 aa5.85□□□□□ -1.47
NFIX-203ENST00000397661 KRTAP6-2Q3LI66 62 aa5.84□□□□□ -1.47
NFIX-203ENST00000397661 MT3P25713 68 aa5.61□□□□□ -1.51
NFIX-203ENST00000397661 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.6□□□□□ -1.51
NFIX-203ENST00000397661 MT4P47944 62 aa5.48□□□□□ -1.53
NFIX-203ENST00000397661 KRTAP6-3Q3LI67 103 aa5.48□□□□□ -1.53
NFIX-203ENST00000397661 KRTAP9-6A0A140TA67 174 aa5.46□□□□□ -1.53
NFIX-203ENST00000397661 KRTAP4-6Q9BYQ5 205 aa5.42□□□□□ -1.54
NFIX-203ENST00000397661 KRTAP2-2Q9BYT5 123 aa5.33□□□□□ -1.56
NFIX-203ENST00000397661 NEBP20929 6669 aa5.31□□□□□ -1.56
NFIX-203ENST00000397661 KRTAP5-4Q6L8H1 288 aa5.17□□□□□ -1.58
NFIX-203ENST00000397661 HMCN1Q96RW7 5635 aa5.15□□□□□ -1.59
NFIX-203ENST00000397661 KRTAP20-2Q3LI61 65 aa5.06□□□□□ -1.6
NFIX-203ENST00000397661 LCE1DQ5T752 114 aa5.02□□□□□ -1.61
NFIX-203ENST00000397661 MUC19Q7Z5P9 8384 aa4.98□□□□□ -1.61
NFIX-203ENST00000397661 MUC5ACP98088 5654 aa4.94□□□□□ -1.62
NFIX-203ENST00000397661 LCE1BQ5T7P3 118 aa4.89□□□□□ -1.63
NFIX-203ENST00000397661 LCE4AQ5TA78 99 aa4.83□□□□□ -1.64
NFIX-203ENST00000397661 KRTAP5-2Q701N4 177 aa4.82□□□□□ -1.64
NFIX-203ENST00000397661 KRTAP4-11Q9BYQ6 195 aa4.81□□□□□ -1.64
NFIX-203ENST00000397661 LCE1EQ5T753 118 aa4.8□□□□□ -1.64
NFIX-203ENST00000397661 KRTAP5-3Q6L8H2 238 aa4.69□□□□□ -1.66
NFIX-203ENST00000397661 KRTAP20-1Q3LI63 56 aa4.61□□□□□ -1.67
NFIX-203ENST00000397661 KRTAP5-10Q6L8G5 202 aa4.42□□□□□ -1.7
NFIX-203ENST00000397661 KRTAP4-2Q9BYR5 136 aa4.32□□□□□ -1.72
NFIX-203ENST00000397661 KRTAP4-4Q9BYR3 166 aa4.3□□□□□ -1.72
NFIX-203ENST00000397661 KRTAP5-1Q6L8H4 278 aa4.23□□□□□ -1.73
NFIX-203ENST00000397661 LCE1CQ5T751 118 aa4.17□□□□□ -1.74
NFIX-203ENST00000397661 MUC5BQ9HC84 5762 aaPredicted RBP4.13□□□□□ -1.75
NFIX-203ENST00000397661 AHNAK2Q8IVF2 5795 aa4.08□□□□□ -1.76
NFIX-203ENST00000397661 KRTAP21-2Q3LI59 83 aa4.06□□□□□ -1.76
NFIX-203ENST00000397661 KRTAP5-8O75690 187 aa3.94□□□□□ -1.78
NFIX-203ENST00000397661 KRTAP4-12Q9BQ66 201 aa3.93□□□□□ -1.78
NFIX-203ENST00000397661 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.79□□□□□ -1.8
NFIX-203ENST00000397661 KRTAP21-1Q3LI58 79 aa3.68□□□□□ -1.82
NFIX-203ENST00000397661 LCE1FQ5T754 118 aa3.65□□□□□ -1.82
NFIX-203ENST00000397661 KRTAP5-7Q6L8G8 165 aa3.59□□□□□ -1.83
NFIX-203ENST00000397661 KRTAP5-11Q6L8G4 156 aa3.55□□□□□ -1.84
NFIX-203ENST00000397661 GPR98Q8WXG9 6306 aa3.51□□□□□ -1.85
NFIX-203ENST00000397661 KRTAP9-9Q9BYP9 154 aa3.37□□□□□ -1.87
NFIX-203ENST00000397661 PHGR1C9JFL3 82 aa3.13□□□□□ -1.91
NFIX-203ENST00000397661 AHNAKQ09666 5890 aaKnown RBP2.98□□□□□ -1.93
NFIX-203ENST00000397661 MUC16Q8WXI7 14507 aa2.11□□□□□ -2.07
Retrieved 77 of 20,778 RNA–protein pairs in 6.6 ms