RNA–Protein interactions for RNA: ENST00000396444.7

USP8-202, Transcript of ubiquitin specific peptidase 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP8, Length 19,026 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-202ENST00000396444 UBR4Q5T4S7 5183 aa1.66□□□□□ -2.14
USP8-202ENST00000396444 EPPK1P58107 5090 aaKnown RBP1.65□□□□□ -2.15
USP8-202ENST00000396444 KRTAP17-1Q9BYP8 105 aa1.65□□□□□ -2.15
USP8-202ENST00000396444 RNF213Q63HN8 5207 aa1.64□□□□□ -2.15
USP8-202ENST00000396444 KRTAP2-2Q9BYT5 123 aa1.64□□□□□ -2.15
USP8-202ENST00000396444 KRTAP19-3Q7Z4W3 81 aa1.64□□□□□ -2.15
USP8-202ENST00000396444 HERC1Q15751 4861 aa1.64□□□□□ -2.15
USP8-202ENST00000396444 GPR98Q8WXG9 6306 aa1.63□□□□□ -2.15
USP8-202ENST00000396444 KRTAP6-3Q3LI67 103 aa1.62□□□□□ -2.15
USP8-202ENST00000396444 KRTAP19-2Q3LHN2 52 aa1.62□□□□□ -2.15
USP8-202ENST00000396444 KRTAP9-1A8MXZ3 250 aaPredicted RBP1.6□□□□□ -2.15
USP8-202ENST00000396444 KRTAP9-9Q9BYP9 154 aa1.6□□□□□ -2.15
USP8-202ENST00000396444 MACF1Q9UPN3 7388 aaKnown RBP1.59□□□□□ -2.15
USP8-202ENST00000396444 FSIP2Q5CZC0 6907 aa1.59□□□□□ -2.15
USP8-202ENST00000396444 LCE4AQ5TA78 99 aa1.59□□□□□ -2.16
USP8-202ENST00000396444 LRP1Q07954 4544 aaKnown RBP1.58□□□□□ -2.16
USP8-202ENST00000396444 HMCN2Q8NDA2 5059 aa1.56□□□□□ -2.16
USP8-202ENST00000396444 USH2AO75445 5202 aa1.55□□□□□ -2.16
USP8-202ENST00000396444 MDN1Q9NU22 5596 aa1.55□□□□□ -2.16
USP8-202ENST00000396444 AHNAK2Q8IVF2 5795 aa1.54□□□□□ -2.16
USP8-202ENST00000396444 DSTQ03001 7570 aaKnown RBP1.53□□□□□ -2.16
USP8-202ENST00000396444 NEBP20929 6669 aa1.52□□□□□ -2.17
USP8-202ENST00000396444 LRP2P98164 4655 aa1.49□□□□□ -2.17
USP8-202ENST00000396444 MT4P47944 62 aa1.49□□□□□ -2.17
USP8-202ENST00000396444 MUC12Q9UKN1 5478 aa1.48□□□□□ -2.17
USP8-202ENST00000396444 KRTAP19-7Q3SYF9 63 aa1.46□□□□□ -2.18
USP8-202ENST00000396444 LCE2AQ5TA79 106 aaPredicted RBP1.45□□□□□ -2.18
USP8-202ENST00000396444 KRTAP4-8A0A0G2JLE6 195 aa1.45□□□□□ -2.18
USP8-202ENST00000396444 KRTAP4-8Q9BYQ9 185 aa1.45□□□□□ -2.18
USP8-202ENST00000396444 AHNAKQ09666 5890 aaKnown RBP1.45□□□□□ -2.18
USP8-202ENST00000396444 LCE5AQ5TCM9 118 aa1.44□□□□□ -2.18
USP8-202ENST00000396444 FAT4Q6V0I7 4981 aa1.42□□□□□ -2.18
USP8-202ENST00000396444 KMT2DO14686 5537 aa1.4□□□□□ -2.19
USP8-202ENST00000396444 KRTAP4-2Q9BYR5 136 aa1.39□□□□□ -2.19
USP8-202ENST00000396444 LCE1CQ5T751 118 aa1.38□□□□□ -2.19
USP8-202ENST00000396444 LCE1EQ5T753 118 aa1.38□□□□□ -2.19
USP8-202ENST00000396444 LCE1FQ5T754 118 aa1.38□□□□□ -2.19
USP8-202ENST00000396444 SSPOA2VEC9 5147 aa1.38□□□□□ -2.19
USP8-202ENST00000396444 KRTAP9-6A8MVA2 160 aa1.37□□□□□ -2.19
USP8-202ENST00000396444 FCGBPQ9Y6R7 5405 aaPredicted RBP1.35□□□□□ -2.19
USP8-202ENST00000396444 HMCN1Q96RW7 5635 aa1.35□□□□□ -2.19
USP8-202ENST00000396444 KRTAP4-7Q9BYR0 210 aa1.34□□□□□ -2.19
USP8-202ENST00000396444 KRTAP5-9P26371 169 aa1.33□□□□□ -2.2
USP8-202ENST00000396444 LCE1DQ5T752 114 aa1.33□□□□□ -2.2
USP8-202ENST00000396444 MUC5BQ9HC84 5762 aaPredicted RBP1.32□□□□□ -2.2
USP8-202ENST00000396444 KRTAP9-4Q9BYQ2 154 aa1.31□□□□□ -2.2
USP8-202ENST00000396444 LOC100996750A0A140TA64 210 aa1.31□□□□□ -2.2
USP8-202ENST00000396444 OBSCNQ5VST9 7968 aa1.3□□□□□ -2.2
USP8-202ENST00000396444 PRM1P04553 51 aa1.29□□□□□ -2.2
USP8-202ENST00000396444 KRTAP4-3Q9BYR4 195 aa1.29□□□□□ -2.2
USP8-202ENST00000396444 SYNE1Q8NF91 8797 aaKnown RBP1.28□□□□□ -2.2
USP8-202ENST00000396444 LCE1BQ5T7P3 118 aa1.28□□□□□ -2.2
USP8-202ENST00000396444 MUC2Q02817 5179 aa1.27□□□□□ -2.21
USP8-202ENST00000396444 KRTAP4-4Q9BYR3 166 aa1.24□□□□□ -2.21
USP8-202ENST00000396444 KRTAP6-2Q3LI66 62 aa1.21□□□□□ -2.22
USP8-202ENST00000396444 KRTAP4-9Q9BYQ8 210 aa1.2□□□□□ -2.22
USP8-202ENST00000396444 MUC5ACP98088 5654 aa1.18□□□□□ -2.22
USP8-202ENST00000396444 KRTAP6-1Q3LI64 71 aa1.17□□□□□ -2.22
USP8-202ENST00000396444 KRTAP5-3Q6L8H2 238 aa1.17□□□□□ -2.22
USP8-202ENST00000396444 KRTAP5-5Q701N2 237 aaPredicted RBP1.17□□□□□ -2.22
USP8-202ENST00000396444 KRTAP5-4Q6L8H1 288 aa1.13□□□□□ -2.23
USP8-202ENST00000396444 PHGR1C9JFL3 82 aa1.07□□□□□ -2.24
USP8-202ENST00000396444 KRTAP4-6Q9BYQ5 205 aa1.05□□□□□ -2.24
USP8-202ENST00000396444 KRTAP20-2Q3LI61 65 aa1.04□□□□□ -2.24
USP8-202ENST00000396444 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.03□□□□□ -2.24
USP8-202ENST00000396444 KRTAP5-2Q701N4 177 aa1.02□□□□□ -2.25
USP8-202ENST00000396444 MUC19Q7Z5P9 8384 aa1□□□□□ -2.25
USP8-202ENST00000396444 KRTAP5-8O75690 187 aa1□□□□□ -2.25
USP8-202ENST00000396444 KRTAP4-11Q9BYQ6 195 aa0.99□□□□□ -2.25
USP8-202ENST00000396444 KRTAP5-11Q6L8G4 156 aa0.99□□□□□ -2.25
USP8-202ENST00000396444 KRTAP5-7Q6L8G8 165 aa0.96□□□□□ -2.26
USP8-202ENST00000396444 KRTAP4-12Q9BQ66 201 aa0.95□□□□□ -2.26
USP8-202ENST00000396444 KRTAP21-1Q3LI58 79 aa0.94□□□□□ -2.26
USP8-202ENST00000396444 KRTAP5-1Q6L8H4 278 aa0.89□□□□□ -2.27
USP8-202ENST00000396444 KRTAP5-10Q6L8G5 202 aa0.88□□□□□ -2.27
USP8-202ENST00000396444 MUC16Q8WXI7 14507 aa0.84□□□□□ -2.27
USP8-202ENST00000396444 KRTAP21-2Q3LI59 83 aa0.76□□□□□ -2.29
Retrieved 77 of 20,778 RNA–protein pairs in 73.8 ms