RNA–Protein interactions for RNA: ENST00000396410.8

PDXDC1-202, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDXDC1, Length 4,521 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-202ENST00000396410 MT1GP13640 62 aa3.83□□□□□ -1.8
PDXDC1-202ENST00000396410 KRTAP19-3Q7Z4W3 81 aa3.83□□□□□ -1.8
PDXDC1-202ENST00000396410 KRTAP4-3Q9BYR4 195 aa3.81□□□□□ -1.8
PDXDC1-202ENST00000396410 MT1MQ8N339 61 aa3.78□□□□□ -1.8
PDXDC1-202ENST00000396410 LOC100996750A0A140TA64 210 aa3.78□□□□□ -1.81
PDXDC1-202ENST00000396410 FCGBPQ9Y6R7 5405 aaPredicted RBP3.77□□□□□ -1.81
PDXDC1-202ENST00000396410 KRTAP9-2Q9BYQ4 174 aa3.75□□□□□ -1.81
PDXDC1-202ENST00000396410 KRTAP2-3P0C7H8 128 aa3.75□□□□□ -1.81
PDXDC1-202ENST00000396410 KRTAP2-4Q9BYR9 128 aa3.75□□□□□ -1.81
PDXDC1-202ENST00000396410 KRTAP2-1Q9BYU5 128 aa3.75□□□□□ -1.81
PDXDC1-202ENST00000396410 MUC12Q9UKN1 5478 aa3.73□□□□□ -1.81
PDXDC1-202ENST00000396410 KRTAP9-6A0A140TA67 174 aa3.67□□□□□ -1.82
PDXDC1-202ENST00000396410 MACF1Q9UPN3 7388 aaKnown RBP3.66□□□□□ -1.82
PDXDC1-202ENST00000396410 DSTQ03001 7570 aaKnown RBP3.63□□□□□ -1.83
PDXDC1-202ENST00000396410 LCE5AQ5TCM9 118 aa3.62□□□□□ -1.83
PDXDC1-202ENST00000396410 SYNE2Q8WXH0 6885 aaKnown RBP3.6□□□□□ -1.83
PDXDC1-202ENST00000396410 SPRR2EP22531 72 aa3.58□□□□□ -1.84
PDXDC1-202ENST00000396410 SPRR2BP35325 72 aa3.58□□□□□ -1.84
PDXDC1-202ENST00000396410 SPRR2AP35326 72 aa3.58□□□□□ -1.84
PDXDC1-202ENST00000396410 LCE3BQ5TA77 95 aa3.57□□□□□ -1.84
PDXDC1-202ENST00000396410 KRTAP12-4P60329 112 aa3.48□□□□□ -1.85
PDXDC1-202ENST00000396410 LCE1AQ5T7P2 110 aa3.46□□□□□ -1.86
PDXDC1-202ENST00000396410 SPRR2DP22532 72 aa3.43□□□□□ -1.86
PDXDC1-202ENST00000396410 KRTAP6-1Q3LI64 71 aa3.4□□□□□ -1.87
PDXDC1-202ENST00000396410 SYNE1Q8NF91 8797 aaKnown RBP3.4□□□□□ -1.87
PDXDC1-202ENST00000396410 MDN1Q9NU22 5596 aa3.4□□□□□ -1.87
PDXDC1-202ENST00000396410 MT1AP04731 61 aa3.4□□□□□ -1.87
PDXDC1-202ENST00000396410 KRTAP5-9P26371 169 aa3.4□□□□□ -1.87
PDXDC1-202ENST00000396410 KRTAP9-7A8MTY7 169 aa3.37□□□□□ -1.87
PDXDC1-202ENST00000396410 KRTAP4-9Q9BYQ8 210 aa3.37□□□□□ -1.87
PDXDC1-202ENST00000396410 LCE3DQ9BYE3 92 aa3.32□□□□□ -1.88
PDXDC1-202ENST00000396410 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.32□□□□□ -1.88
PDXDC1-202ENST00000396410 KRTAP6-3Q3LI67 103 aa3.27□□□□□ -1.89
PDXDC1-202ENST00000396410 LCE3EQ5T5B0 92 aa3.27□□□□□ -1.89
PDXDC1-202ENST00000396410 KRTAP5-5Q701N2 237 aaPredicted RBP3.2□□□□□ -1.9
PDXDC1-202ENST00000396410 KRTAP9-4Q9BYQ2 154 aa3.2□□□□□ -1.9
PDXDC1-202ENST00000396410 KRTAP20-1Q3LI63 56 aa3.18□□□□□ -1.9
PDXDC1-202ENST00000396410 MT3P25713 68 aa3.15□□□□□ -1.91
PDXDC1-202ENST00000396410 KRTAP6-2Q3LI66 62 aa3.12□□□□□ -1.91
PDXDC1-202ENST00000396410 OBSCNQ5VST9 7968 aa3.1□□□□□ -1.91
PDXDC1-202ENST00000396410 PRM1P04553 51 aa3.05□□□□□ -1.92
PDXDC1-202ENST00000396410 MT4P47944 62 aa3.04□□□□□ -1.92
PDXDC1-202ENST00000396410 NEBP20929 6669 aa3.02□□□□□ -1.93
PDXDC1-202ENST00000396410 KRTAP2-2Q9BYT5 123 aa2.93□□□□□ -1.94
PDXDC1-202ENST00000396410 KRTAP4-6Q9BYQ5 205 aa2.9□□□□□ -1.95
PDXDC1-202ENST00000396410 LCE4AQ5TA78 99 aa2.9□□□□□ -1.95
PDXDC1-202ENST00000396410 KRTAP5-4Q6L8H1 288 aa2.87□□□□□ -1.95
PDXDC1-202ENST00000396410 KRTAP20-2Q3LI61 65 aa2.81□□□□□ -1.96
PDXDC1-202ENST00000396410 LCE1DQ5T752 114 aa2.76□□□□□ -1.97
PDXDC1-202ENST00000396410 GPR98Q8WXG9 6306 aa2.68□□□□□ -1.98
PDXDC1-202ENST00000396410 HMCN1Q96RW7 5635 aa2.67□□□□□ -1.98
PDXDC1-202ENST00000396410 LCE1BQ5T7P3 118 aa2.66□□□□□ -1.98
PDXDC1-202ENST00000396410 KRTAP5-2Q701N4 177 aa2.65□□□□□ -1.99
PDXDC1-202ENST00000396410 KRTAP5-3Q6L8H2 238 aa2.58□□□□□ -2
PDXDC1-202ENST00000396410 LCE1EQ5T753 118 aa2.48□□□□□ -2.01
PDXDC1-202ENST00000396410 MUC5ACP98088 5654 aa2.47□□□□□ -2.01
PDXDC1-202ENST00000396410 KRTAP4-11Q9BYQ6 195 aa2.38□□□□□ -2.03
PDXDC1-202ENST00000396410 KRTAP9-9Q9BYP9 154 aa2.35□□□□□ -2.03
PDXDC1-202ENST00000396410 LCE1CQ5T751 118 aa2.32□□□□□ -2.04
PDXDC1-202ENST00000396410 KRTAP4-2Q9BYR5 136 aa2.3□□□□□ -2.04
PDXDC1-202ENST00000396410 KRTAP5-10Q6L8G5 202 aa2.29□□□□□ -2.04
PDXDC1-202ENST00000396410 KRTAP5-1Q6L8H4 278 aa2.28□□□□□ -2.04
PDXDC1-202ENST00000396410 AHNAK2Q8IVF2 5795 aa2.23□□□□□ -2.05
PDXDC1-202ENST00000396410 KRTAP5-8O75690 187 aa2.19□□□□□ -2.06
PDXDC1-202ENST00000396410 KRTAP4-12Q9BQ66 201 aa2.17□□□□□ -2.06
PDXDC1-202ENST00000396410 MUC19Q7Z5P9 8384 aa2.13□□□□□ -2.07
PDXDC1-202ENST00000396410 KRTAP21-2Q3LI59 83 aa2.12□□□□□ -2.07
PDXDC1-202ENST00000396410 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.11□□□□□ -2.07
PDXDC1-202ENST00000396410 LCE1FQ5T754 118 aa2.11□□□□□ -2.07
PDXDC1-202ENST00000396410 KRTAP4-4Q9BYR3 166 aa2.11□□□□□ -2.07
PDXDC1-202ENST00000396410 KRTAP5-7Q6L8G8 165 aa2.06□□□□□ -2.08
PDXDC1-202ENST00000396410 KRTAP5-11Q6L8G4 156 aa2□□□□□ -2.09
PDXDC1-202ENST00000396410 MUC5BQ9HC84 5762 aaPredicted RBP1.97□□□□□ -2.09
PDXDC1-202ENST00000396410 AHNAKQ09666 5890 aaKnown RBP1.86□□□□□ -2.11
PDXDC1-202ENST00000396410 KRTAP21-1Q3LI58 79 aa1.77□□□□□ -2.13
PDXDC1-202ENST00000396410 PHGR1C9JFL3 82 aa1.73□□□□□ -2.13
PDXDC1-202ENST00000396410 MUC16Q8WXI7 14507 aa1.1□□□□□ -2.23
Retrieved 77 of 20,778 RNA–protein pairs in 6.8 ms