RNA–Protein interactions for RNA: ENST00000396027.8

XRCC4-203, Transcript of X-ray repair cross complementing 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene XRCC4, Length 1,530 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC4-203ENST00000396027 KRTAP12-3P60328 96 aa1.35□□□□□ -2.19
XRCC4-203ENST00000396027 KRTAP2-4Q9BYR9 128 aa1.35□□□□□ -2.19
XRCC4-203ENST00000396027 KRTAP2-1Q9BYU5 128 aa1.35□□□□□ -2.19
XRCC4-203ENST00000396027 RYR1P21817 5038 aa1.34□□□□□ -2.19
XRCC4-203ENST00000396027 MT1HL1P0DM35 61 aa1.34□□□□□ -2.2
XRCC4-203ENST00000396027 FLGP20930 4061 aaPredicted RBP1.31□□□□□ -2.2
XRCC4-203ENST00000396027 KMT2CQ8NEZ4 4911 aaKnown RBP1.31□□□□□ -2.2
XRCC4-203ENST00000396027 SPRR2GQ9BYE4 73 aa1.3□□□□□ -2.2
XRCC4-203ENST00000396027 LPAP08519 4548 aa1.3□□□□□ -2.2
XRCC4-203ENST00000396027 LRP2P98164 4655 aa1.29□□□□□ -2.2
XRCC4-203ENST00000396027 RYR3Q15413 4870 aa1.28□□□□□ -2.2
XRCC4-203ENST00000396027 KIAA1109Q2LD37 5005 aa1.28□□□□□ -2.2
XRCC4-203ENST00000396027 MUC17Q685J3 4493 aa1.27□□□□□ -2.21
XRCC4-203ENST00000396027 KRTAP19-2Q3LHN2 52 aa1.26□□□□□ -2.21
XRCC4-203ENST00000396027 KRTAP4-1Q9BYQ7 146 aa1.26□□□□□ -2.21
XRCC4-203ENST00000396027 KRTAP12-4P60329 112 aa1.25□□□□□ -2.21
XRCC4-203ENST00000396027 GPR98Q8WXG9 6306 aa1.25□□□□□ -2.21
XRCC4-203ENST00000396027 ABCA13Q86UQ4 5058 aa1.25□□□□□ -2.21
XRCC4-203ENST00000396027 EPPK1P58107 5090 aaKnown RBP1.24□□□□□ -2.21
XRCC4-203ENST00000396027 LCE3DQ9BYE3 92 aa1.23□□□□□ -2.21
XRCC4-203ENST00000396027 HERC1Q15751 4861 aa1.23□□□□□ -2.21
XRCC4-203ENST00000396027 CRCT1Q9UGL9 99 aa1.21□□□□□ -2.22
XRCC4-203ENST00000396027 BIRC6Q9NR09 4857 aa1.19□□□□□ -2.22
XRCC4-203ENST00000396027 KRTAP6-3Q3LI67 103 aa1.18□□□□□ -2.22
XRCC4-203ENST00000396027 KRTAP19-8Q3LI54 63 aa1.17□□□□□ -2.22
XRCC4-203ENST00000396027 HERC2O95714 4834 aa1.17□□□□□ -2.22
XRCC4-203ENST00000396027 MT1AP04731 61 aa1.16□□□□□ -2.22
XRCC4-203ENST00000396027 KRTAP19-5Q3LI72 72 aa1.15□□□□□ -2.22
XRCC4-203ENST00000396027 MUC2Q02817 5179 aa1.15□□□□□ -2.23
XRCC4-203ENST00000396027 MT1EP04732 61 aa1.14□□□□□ -2.23
XRCC4-203ENST00000396027 HMCN2Q8NDA2 5059 aa1.13□□□□□ -2.23
XRCC4-203ENST00000396027 PCLOQ9Y6V0 5065 aa1.13□□□□□ -2.23
XRCC4-203ENST00000396027 MT1LQ93083 61 aa1.11□□□□□ -2.23
XRCC4-203ENST00000396027 MT2AP02795 61 aa1.1□□□□□ -2.23
XRCC4-203ENST00000396027 MT1FP04733 61 aa1.1□□□□□ -2.23
XRCC4-203ENST00000396027 MT1HP80294 61 aa1.1□□□□□ -2.23
XRCC4-203ENST00000396027 RNF213Q63HN8 5207 aa1.1□□□□□ -2.23
XRCC4-203ENST00000396027 MT1XP80297 61 aa1.1□□□□□ -2.23
XRCC4-203ENST00000396027 MT1BP07438 61 aa1.09□□□□□ -2.24
XRCC4-203ENST00000396027 UBR4Q5T4S7 5183 aa1.09□□□□□ -2.24
XRCC4-203ENST00000396027 FAT4Q6V0I7 4981 aa1.08□□□□□ -2.24
XRCC4-203ENST00000396027 PRM1P04553 51 aa1.06□□□□□ -2.24
XRCC4-203ENST00000396027 SPRR2AP35326 72 aa1.06□□□□□ -2.24
XRCC4-203ENST00000396027 SPRR2BP35325 72 aa1.04□□□□□ -2.24
XRCC4-203ENST00000396027 MUC5BQ9HC84 5762 aaPredicted RBP1.01□□□□□ -2.25
XRCC4-203ENST00000396027 SPRR2FQ96RM1 72 aa1.01□□□□□ -2.25
XRCC4-203ENST00000396027 SPRR2DP22532 72 aa0.99□□□□□ -2.25
XRCC4-203ENST00000396027 AHNAKQ09666 5890 aaKnown RBP0.97□□□□□ -2.25
XRCC4-203ENST00000396027 MT1GP13640 62 aa0.97□□□□□ -2.25
XRCC4-203ENST00000396027 KRTAP19-7Q3SYF9 63 aa0.97□□□□□ -2.25
XRCC4-203ENST00000396027 USH2AO75445 5202 aa0.97□□□□□ -2.25
XRCC4-203ENST00000396027 SPRR2EP22531 72 aa0.95□□□□□ -2.26
XRCC4-203ENST00000396027 FCGBPQ9Y6R7 5405 aaPredicted RBP0.95□□□□□ -2.26
XRCC4-203ENST00000396027 KMT2DO14686 5537 aa0.95□□□□□ -2.26
XRCC4-203ENST00000396027 KRTAP6-2Q3LI66 62 aa0.93□□□□□ -2.26
XRCC4-203ENST00000396027 MT1MQ8N339 61 aa0.92□□□□□ -2.26
XRCC4-203ENST00000396027 SYNE1Q8NF91 8797 aaKnown RBP0.91□□□□□ -2.26
XRCC4-203ENST00000396027 SSPOA2VEC9 5147 aa0.9□□□□□ -2.27
XRCC4-203ENST00000396027 KRTAP19-6Q3LI70 58 aa0.89□□□□□ -2.27
XRCC4-203ENST00000396027 KRTAP19-3Q7Z4W3 81 aa0.88□□□□□ -2.27
XRCC4-203ENST00000396027 MACF1Q9UPN3 7388 aaKnown RBP0.86□□□□□ -2.27
XRCC4-203ENST00000396027 AHNAK2Q8IVF2 5795 aa0.85□□□□□ -2.27
XRCC4-203ENST00000396027 MUC12Q9UKN1 5478 aa0.82□□□□□ -2.28
XRCC4-203ENST00000396027 KRTAP6-1Q3LI64 71 aa0.8□□□□□ -2.28
XRCC4-203ENST00000396027 KRTAP21-1Q3LI58 79 aa0.78□□□□□ -2.28
XRCC4-203ENST00000396027 MDN1Q9NU22 5596 aa0.74□□□□□ -2.29
XRCC4-203ENST00000396027 DSTQ03001 7570 aaKnown RBP0.73□□□□□ -2.29
XRCC4-203ENST00000396027 FSIP2Q5CZC0 6907 aa0.7□□□□□ -2.3
XRCC4-203ENST00000396027 KRTAP5-10Q6L8G5 202 aa0.69□□□□□ -2.3
XRCC4-203ENST00000396027 MUC5ACP98088 5654 aa0.65□□□□□ -2.31
XRCC4-203ENST00000396027 SYNE2Q8WXH0 6885 aaKnown RBP0.63□□□□□ -2.31
XRCC4-203ENST00000396027 KRTAP20-2Q3LI61 65 aa0.61□□□□□ -2.31
XRCC4-203ENST00000396027 MT4P47944 62 aa0.59□□□□□ -2.31
XRCC4-203ENST00000396027 KRTAP20-1Q3LI63 56 aa0.56□□□□□ -2.32
XRCC4-203ENST00000396027 MUC16Q8WXI7 14507 aa0.54□□□□□ -2.32
XRCC4-203ENST00000396027 NEBP20929 6669 aa0.53□□□□□ -2.32
XRCC4-203ENST00000396027 PHGR1C9JFL3 82 aa0.39□□□□□ -2.35
Retrieved 77 of 20,778 RNA–protein pairs in 135.6 ms