RNA–Protein interactions for RNA: ENST00000394767.2

CXXC4-201, Transcript of CXXC finger protein 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CXXC4, Length 5,565 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC4-201ENST00000394767 USH2AO75445 5202 aa6.57□□□□□ -1.36
CXXC4-201ENST00000394767 KRTAP4-7Q9BYR0 210 aa6.53□□□□□ -1.36
CXXC4-201ENST00000394767 KRTAP9-7A8MTY7 169 aa6.51□□□□□ -1.37
CXXC4-201ENST00000394767 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.47□□□□□ -1.37
CXXC4-201ENST00000394767 INE1O15225 51 aa6.45□□□□□ -1.38
CXXC4-201ENST00000394767 KRTAP19-7Q3SYF9 63 aa6.44□□□□□ -1.38
CXXC4-201ENST00000394767 MT1MQ8N339 61 aa6.42□□□□□ -1.38
CXXC4-201ENST00000394767 KRTAP12-4P60329 112 aa6.39□□□□□ -1.39
CXXC4-201ENST00000394767 KRTAP6-3Q3LI67 103 aa6.37□□□□□ -1.39
CXXC4-201ENST00000394767 LCE3BQ5TA77 95 aa6.33□□□□□ -1.4
CXXC4-201ENST00000394767 SYNE2Q8WXH0 6885 aaKnown RBP6.32□□□□□ -1.4
CXXC4-201ENST00000394767 KRTAP4-3Q9BYR4 195 aa6.29□□□□□ -1.4
CXXC4-201ENST00000394767 SYNE1Q8NF91 8797 aaKnown RBP6.24□□□□□ -1.41
CXXC4-201ENST00000394767 SSPOA2VEC9 5147 aa6.19□□□□□ -1.42
CXXC4-201ENST00000394767 SPRR5A0A1B0GTR4 108 aa6.19□□□□□ -1.42
CXXC4-201ENST00000394767 FCGBPQ9Y6R7 5405 aaPredicted RBP6.19□□□□□ -1.42
CXXC4-201ENST00000394767 MACF1Q9UPN3 7388 aaKnown RBP6.16□□□□□ -1.42
CXXC4-201ENST00000394767 LOC100996750A0A140TA64 210 aa6.14□□□□□ -1.43
CXXC4-201ENST00000394767 LCE1AQ5T7P2 110 aa6.12□□□□□ -1.43
CXXC4-201ENST00000394767 MT4P47944 62 aa6.12□□□□□ -1.43
CXXC4-201ENST00000394767 KRTAP20-1Q3LI63 56 aa6.1□□□□□ -1.43
CXXC4-201ENST00000394767 KMT2DO14686 5537 aa6.07□□□□□ -1.44
CXXC4-201ENST00000394767 LCE5AQ5TCM9 118 aa6□□□□□ -1.45
CXXC4-201ENST00000394767 KRTAP2-3P0C7H8 128 aa5.96□□□□□ -1.45
CXXC4-201ENST00000394767 KRTAP2-4Q9BYR9 128 aa5.96□□□□□ -1.45
CXXC4-201ENST00000394767 DSTQ03001 7570 aaKnown RBP5.9□□□□□ -1.46
CXXC4-201ENST00000394767 KRTAP5-9P26371 169 aa5.81□□□□□ -1.48
CXXC4-201ENST00000394767 KRTAP2-2Q9BYT5 123 aa5.81□□□□□ -1.48
CXXC4-201ENST00000394767 KRTAP2-1Q9BYU5 128 aa5.81□□□□□ -1.48
CXXC4-201ENST00000394767 MUC12Q9UKN1 5478 aa5.8□□□□□ -1.48
CXXC4-201ENST00000394767 OBSCNQ5VST9 7968 aa5.8□□□□□ -1.48
CXXC4-201ENST00000394767 MT1AP04731 61 aa5.79□□□□□ -1.48
CXXC4-201ENST00000394767 MT3P25713 68 aa5.79□□□□□ -1.48
CXXC4-201ENST00000394767 LCE3DQ9BYE3 92 aa5.79□□□□□ -1.48
CXXC4-201ENST00000394767 KRTAP4-9Q9BYQ8 210 aa5.68□□□□□ -1.5
CXXC4-201ENST00000394767 KRTAP9-6A8MVA2 160 aa5.66□□□□□ -1.5
CXXC4-201ENST00000394767 LCE3EQ5T5B0 92 aa5.63□□□□□ -1.51
CXXC4-201ENST00000394767 LCE4AQ5TA78 99 aa5.61□□□□□ -1.51
CXXC4-201ENST00000394767 NEBP20929 6669 aa5.6□□□□□ -1.51
CXXC4-201ENST00000394767 KRTAP6-1Q3LI64 71 aa5.57□□□□□ -1.52
CXXC4-201ENST00000394767 MDN1Q9NU22 5596 aa5.49□□□□□ -1.53
CXXC4-201ENST00000394767 KRTAP6-2Q3LI66 62 aa5.41□□□□□ -1.54
CXXC4-201ENST00000394767 LCE1DQ5T752 114 aa5.41□□□□□ -1.54
CXXC4-201ENST00000394767 KRTAP9-4Q9BYQ2 154 aa5.4□□□□□ -1.54
CXXC4-201ENST00000394767 LCE1BQ5T7P3 118 aa5.33□□□□□ -1.56
CXXC4-201ENST00000394767 KRTAP4-6Q9BYQ5 205 aa5.13□□□□□ -1.59
CXXC4-201ENST00000394767 KRTAP20-2Q3LI61 65 aa4.98□□□□□ -1.61
CXXC4-201ENST00000394767 PRM1P04553 51 aa4.95□□□□□ -1.62
CXXC4-201ENST00000394767 MUC19Q7Z5P9 8384 aa4.91□□□□□ -1.62
CXXC4-201ENST00000394767 KRTAP5-5Q701N2 237 aaPredicted RBP4.76□□□□□ -1.65
CXXC4-201ENST00000394767 KRTAP5-4Q6L8H1 288 aa4.74□□□□□ -1.65
CXXC4-201ENST00000394767 GPR98Q8WXG9 6306 aa4.72□□□□□ -1.65
CXXC4-201ENST00000394767 KRTAP9-9Q9BYP9 154 aa4.62□□□□□ -1.67
CXXC4-201ENST00000394767 KRTAP4-11Q9BYQ6 195 aa4.49□□□□□ -1.69
CXXC4-201ENST00000394767 LCE1CQ5T751 118 aa4.38□□□□□ -1.71
CXXC4-201ENST00000394767 LCE1EQ5T753 118 aa4.38□□□□□ -1.71
CXXC4-201ENST00000394767 LCE1FQ5T754 118 aa4.38□□□□□ -1.71
CXXC4-201ENST00000394767 KRTAP5-3Q6L8H2 238 aa4.37□□□□□ -1.71
CXXC4-201ENST00000394767 HMCN1Q96RW7 5635 aa4.35□□□□□ -1.71
CXXC4-201ENST00000394767 MUC5ACP98088 5654 aa4.23□□□□□ -1.73
CXXC4-201ENST00000394767 KRTAP5-2Q701N4 177 aa4.08□□□□□ -1.76
CXXC4-201ENST00000394767 KRTAP4-12Q9BQ66 201 aa4.03□□□□□ -1.76
CXXC4-201ENST00000394767 KRTAP4-2Q9BYR5 136 aa4.03□□□□□ -1.76
CXXC4-201ENST00000394767 AHNAK2Q8IVF2 5795 aa4.03□□□□□ -1.76
CXXC4-201ENST00000394767 KRTAP5-8O75690 187 aa3.97□□□□□ -1.77
CXXC4-201ENST00000394767 KRTAP4-4Q9BYR3 166 aa3.85□□□□□ -1.79
CXXC4-201ENST00000394767 KRTAP5-10Q6L8G5 202 aa3.63□□□□□ -1.83
CXXC4-201ENST00000394767 KRTAP5-1Q6L8H4 278 aa3.62□□□□□ -1.83
CXXC4-201ENST00000394767 KRTAP5-7Q6L8G8 165 aa3.42□□□□□ -1.86
CXXC4-201ENST00000394767 AHNAKQ09666 5890 aaKnown RBP3.39□□□□□ -1.87
CXXC4-201ENST00000394767 MUC5BQ9HC84 5762 aaPredicted RBP3.34□□□□□ -1.87
CXXC4-201ENST00000394767 KRTAP5-11Q6L8G4 156 aa3.32□□□□□ -1.88
CXXC4-201ENST00000394767 KRTAP21-2Q3LI59 83 aa3.16□□□□□ -1.9
CXXC4-201ENST00000394767 PHGR1C9JFL3 82 aa3.12□□□□□ -1.91
CXXC4-201ENST00000394767 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.11□□□□□ -1.91
CXXC4-201ENST00000394767 KRTAP21-1Q3LI58 79 aa2.24□□□□□ -2.05
CXXC4-201ENST00000394767 MUC16Q8WXI7 14507 aa1.93□□□□□ -2.1
Retrieved 77 of 20,778 RNA–protein pairs in 70.6 ms