RNA–Protein interactions for RNA: ENST00000394055.7

CDH16-202, Transcript of cadherin 16, humanhuman

TSL 1 (best) BASIC

Gene CDH16, Length 2,821 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH16-202ENST00000394055 KRTAP4-3Q9BYR4 195 aa4.94□□□□□ -1.62
CDH16-202ENST00000394055 LOC100996750A0A140TA64 210 aa4.87□□□□□ -1.63
CDH16-202ENST00000394055 KRTAP19-3Q7Z4W3 81 aa4.87□□□□□ -1.63
CDH16-202ENST00000394055 MT1MQ8N339 61 aa4.85□□□□□ -1.63
CDH16-202ENST00000394055 MACF1Q9UPN3 7388 aaKnown RBP4.85□□□□□ -1.63
CDH16-202ENST00000394055 SPRR2FQ96RM1 72 aa4.83□□□□□ -1.64
CDH16-202ENST00000394055 KRTAP2-3P0C7H8 128 aa4.82□□□□□ -1.64
CDH16-202ENST00000394055 MT1GP13640 62 aa4.82□□□□□ -1.64
CDH16-202ENST00000394055 KRTAP2-4Q9BYR9 128 aa4.82□□□□□ -1.64
CDH16-202ENST00000394055 KRTAP2-1Q9BYU5 128 aa4.82□□□□□ -1.64
CDH16-202ENST00000394055 CRCT1Q9UGL9 99 aa4.78□□□□□ -1.65
CDH16-202ENST00000394055 DSTQ03001 7570 aaKnown RBP4.77□□□□□ -1.65
CDH16-202ENST00000394055 KRTAP9-2Q9BYQ4 174 aa4.73□□□□□ -1.65
CDH16-202ENST00000394055 SYNE2Q8WXH0 6885 aaKnown RBP4.71□□□□□ -1.65
CDH16-202ENST00000394055 LCE5AQ5TCM9 118 aa4.71□□□□□ -1.66
CDH16-202ENST00000394055 MDN1Q9NU22 5596 aa4.6□□□□□ -1.67
CDH16-202ENST00000394055 LCE1AQ5T7P2 110 aa4.5□□□□□ -1.69
CDH16-202ENST00000394055 KRTAP5-9P26371 169 aa4.48□□□□□ -1.69
CDH16-202ENST00000394055 KRTAP12-4P60329 112 aa4.47□□□□□ -1.69
CDH16-202ENST00000394055 SPRR2EP22531 72 aa4.44□□□□□ -1.7
CDH16-202ENST00000394055 SPRR2BP35325 72 aa4.44□□□□□ -1.7
CDH16-202ENST00000394055 SPRR2AP35326 72 aa4.44□□□□□ -1.7
CDH16-202ENST00000394055 LCE3BQ5TA77 95 aa4.43□□□□□ -1.7
CDH16-202ENST00000394055 SYNE1Q8NF91 8797 aaKnown RBP4.39□□□□□ -1.71
CDH16-202ENST00000394055 KRTAP6-1Q3LI64 71 aa4.38□□□□□ -1.71
CDH16-202ENST00000394055 KRTAP4-9Q9BYQ8 210 aa4.32□□□□□ -1.72
CDH16-202ENST00000394055 MT1AP04731 61 aa4.31□□□□□ -1.72
CDH16-202ENST00000394055 KRTAP5-5Q701N2 237 aaPredicted RBP4.27□□□□□ -1.73
CDH16-202ENST00000394055 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.25□□□□□ -1.73
CDH16-202ENST00000394055 SPRR2DP22532 72 aa4.25□□□□□ -1.73
CDH16-202ENST00000394055 KRTAP6-3Q3LI67 103 aa4.19□□□□□ -1.74
CDH16-202ENST00000394055 KRTAP9-6A0A140TA67 174 aa4.13□□□□□ -1.75
CDH16-202ENST00000394055 LCE3DQ9BYE3 92 aa4.07□□□□□ -1.76
CDH16-202ENST00000394055 KRTAP2-2Q9BYT5 123 aa4.07□□□□□ -1.76
CDH16-202ENST00000394055 KRTAP9-4Q9BYQ2 154 aa4.06□□□□□ -1.76
CDH16-202ENST00000394055 PRM1P04553 51 aa4.05□□□□□ -1.76
CDH16-202ENST00000394055 KRTAP9-7A8MTY7 169 aa4.01□□□□□ -1.77
CDH16-202ENST00000394055 LCE3EQ5T5B0 92 aa3.99□□□□□ -1.77
CDH16-202ENST00000394055 OBSCNQ5VST9 7968 aa3.99□□□□□ -1.77
CDH16-202ENST00000394055 KRTAP6-2Q3LI66 62 aa3.96□□□□□ -1.78
CDH16-202ENST00000394055 NEBP20929 6669 aa3.95□□□□□ -1.78
CDH16-202ENST00000394055 MT3P25713 68 aa3.88□□□□□ -1.79
CDH16-202ENST00000394055 KRTAP5-4Q6L8H1 288 aa3.84□□□□□ -1.8
CDH16-202ENST00000394055 MT4P47944 62 aa3.78□□□□□ -1.8
CDH16-202ENST00000394055 KRTAP4-6Q9BYQ5 205 aa3.78□□□□□ -1.8
CDH16-202ENST00000394055 LCE1EQ5T753 118 aa3.77□□□□□ -1.81
CDH16-202ENST00000394055 KRTAP20-2Q3LI61 65 aa3.64□□□□□ -1.83
CDH16-202ENST00000394055 LCE4AQ5TA78 99 aa3.64□□□□□ -1.83
CDH16-202ENST00000394055 LCE1DQ5T752 114 aa3.62□□□□□ -1.83
CDH16-202ENST00000394055 HMCN1Q96RW7 5635 aa3.6□□□□□ -1.83
CDH16-202ENST00000394055 KRTAP5-2Q701N4 177 aa3.55□□□□□ -1.84
CDH16-202ENST00000394055 KRTAP20-1Q3LI63 56 aa3.46□□□□□ -1.86
CDH16-202ENST00000394055 KRTAP5-3Q6L8H2 238 aa3.45□□□□□ -1.86
CDH16-202ENST00000394055 MUC5ACP98088 5654 aa3.28□□□□□ -1.88
CDH16-202ENST00000394055 LCE1BQ5T7P3 118 aa3.22□□□□□ -1.89
CDH16-202ENST00000394055 LCE1FQ5T754 118 aa3.21□□□□□ -1.9
CDH16-202ENST00000394055 KRTAP5-1Q6L8H4 278 aa3.06□□□□□ -1.92
CDH16-202ENST00000394055 KRTAP4-2Q9BYR5 136 aa3.06□□□□□ -1.92
CDH16-202ENST00000394055 KRTAP4-11Q9BYQ6 195 aa3.06□□□□□ -1.92
CDH16-202ENST00000394055 KRTAP5-10Q6L8G5 202 aa3.03□□□□□ -1.92
CDH16-202ENST00000394055 LCE1CQ5T751 118 aa3.01□□□□□ -1.93
CDH16-202ENST00000394055 KRTAP5-8O75690 187 aa2.92□□□□□ -1.94
CDH16-202ENST00000394055 AHNAK2Q8IVF2 5795 aa2.92□□□□□ -1.94
CDH16-202ENST00000394055 KRTAP21-2Q3LI59 83 aa2.81□□□□□ -1.96
CDH16-202ENST00000394055 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.8□□□□□ -1.96
CDH16-202ENST00000394055 KRTAP5-7Q6L8G8 165 aa2.8□□□□□ -1.96
CDH16-202ENST00000394055 KRTAP9-9Q9BYP9 154 aa2.75□□□□□ -1.97
CDH16-202ENST00000394055 MUC19Q7Z5P9 8384 aa2.73□□□□□ -1.97
CDH16-202ENST00000394055 MUC5BQ9HC84 5762 aaPredicted RBP2.65□□□□□ -1.99
CDH16-202ENST00000394055 KRTAP4-4Q9BYR3 166 aa2.64□□□□□ -1.99
CDH16-202ENST00000394055 KRTAP5-11Q6L8G4 156 aa2.6□□□□□ -1.99
CDH16-202ENST00000394055 KRTAP21-1Q3LI58 79 aa2.58□□□□□ -2
CDH16-202ENST00000394055 KRTAP4-12Q9BQ66 201 aa2.58□□□□□ -2
CDH16-202ENST00000394055 GPR98Q8WXG9 6306 aa2.54□□□□□ -2
CDH16-202ENST00000394055 PHGR1C9JFL3 82 aa2.26□□□□□ -2.05
CDH16-202ENST00000394055 AHNAKQ09666 5890 aaKnown RBP2.08□□□□□ -2.08
CDH16-202ENST00000394055 MUC16Q8WXI7 14507 aa1.47□□□□□ -2.17
Retrieved 77 of 20,778 RNA–protein pairs in 198.8 ms