RNA–Protein interactions for RNA: ENST00000394053.6

MTHFD2-201, Transcript of methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MTHFD2, Length 4,456 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD2-201ENST00000394053 MT1LQ93083 61 aa3.6□□□□□ -1.83
MTHFD2-201ENST00000394053 KRTAP19-3Q7Z4W3 81 aa3.6□□□□□ -1.83
MTHFD2-201ENST00000394053 SPRR2DP22532 72 aa3.58□□□□□ -1.84
MTHFD2-201ENST00000394053 LCE3BQ5TA77 95 aa3.54□□□□□ -1.84
MTHFD2-201ENST00000394053 KRTAP19-7Q3SYF9 63 aa3.49□□□□□ -1.85
MTHFD2-201ENST00000394053 MT1MQ8N339 61 aa3.46□□□□□ -1.86
MTHFD2-201ENST00000394053 USH2AO75445 5202 aa3.44□□□□□ -1.86
MTHFD2-201ENST00000394053 KRTAP12-4P60329 112 aa3.43□□□□□ -1.86
MTHFD2-201ENST00000394053 KRTAP4-3Q9BYR4 195 aa3.43□□□□□ -1.86
MTHFD2-201ENST00000394053 OBSCNQ5VST9 7968 aa3.41□□□□□ -1.86
MTHFD2-201ENST00000394053 LOC100996750A0A140TA64 210 aa3.38□□□□□ -1.87
MTHFD2-201ENST00000394053 DSTQ03001 7570 aaKnown RBP3.37□□□□□ -1.87
MTHFD2-201ENST00000394053 KRTAP9-6A0A140TA67 174 aa3.36□□□□□ -1.87
MTHFD2-201ENST00000394053 FCGBPQ9Y6R7 5405 aaPredicted RBP3.31□□□□□ -1.88
MTHFD2-201ENST00000394053 SYNE2Q8WXH0 6885 aaKnown RBP3.3□□□□□ -1.88
MTHFD2-201ENST00000394053 LCE3DQ9BYE3 92 aa3.29□□□□□ -1.88
MTHFD2-201ENST00000394053 KMT2DO14686 5537 aa3.27□□□□□ -1.89
MTHFD2-201ENST00000394053 LCE3EQ5T5B0 92 aa3.22□□□□□ -1.89
MTHFD2-201ENST00000394053 MT4P47944 62 aa3.21□□□□□ -1.9
MTHFD2-201ENST00000394053 KRTAP9-6A8MVA2 160 aa3.19□□□□□ -1.9
MTHFD2-201ENST00000394053 KRTAP9-7A8MTY7 169 aa3.18□□□□□ -1.9
MTHFD2-201ENST00000394053 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.18□□□□□ -1.9
MTHFD2-201ENST00000394053 LCE5AQ5TCM9 118 aa3.18□□□□□ -1.9
MTHFD2-201ENST00000394053 KRTAP6-3Q3LI67 103 aa3.17□□□□□ -1.9
MTHFD2-201ENST00000394053 MT3P25713 68 aa3.16□□□□□ -1.9
MTHFD2-201ENST00000394053 SSPOA2VEC9 5147 aa3.16□□□□□ -1.9
MTHFD2-201ENST00000394053 LCE1AQ5T7P2 110 aa3.16□□□□□ -1.9
MTHFD2-201ENST00000394053 MACF1Q9UPN3 7388 aaKnown RBP3.16□□□□□ -1.9
MTHFD2-201ENST00000394053 MT1AP04731 61 aa3.14□□□□□ -1.91
MTHFD2-201ENST00000394053 MUC12Q9UKN1 5478 aa3.12□□□□□ -1.91
MTHFD2-201ENST00000394053 KRTAP2-3P0C7H8 128 aa3.1□□□□□ -1.91
MTHFD2-201ENST00000394053 KRTAP2-4Q9BYR9 128 aa3.1□□□□□ -1.91
MTHFD2-201ENST00000394053 KRTAP2-1Q9BYU5 128 aa3.1□□□□□ -1.91
MTHFD2-201ENST00000394053 KRTAP4-9Q9BYQ8 210 aa3.07□□□□□ -1.92
MTHFD2-201ENST00000394053 KRTAP6-1Q3LI64 71 aa3.04□□□□□ -1.92
MTHFD2-201ENST00000394053 KRTAP20-1Q3LI63 56 aa2.99□□□□□ -1.93
MTHFD2-201ENST00000394053 LCE1DQ5T752 114 aa2.95□□□□□ -1.94
MTHFD2-201ENST00000394053 KRTAP6-2Q3LI66 62 aa2.93□□□□□ -1.94
MTHFD2-201ENST00000394053 KRTAP5-9P26371 169 aa2.93□□□□□ -1.94
MTHFD2-201ENST00000394053 LCE1BQ5T7P3 118 aa2.92□□□□□ -1.94
MTHFD2-201ENST00000394053 KRTAP9-4Q9BYQ2 154 aa2.91□□□□□ -1.94
MTHFD2-201ENST00000394053 KRTAP2-2Q9BYT5 123 aa2.91□□□□□ -1.94
MTHFD2-201ENST00000394053 PRM1P04553 51 aa2.91□□□□□ -1.94
MTHFD2-201ENST00000394053 LCE4AQ5TA78 99 aa2.87□□□□□ -1.95
MTHFD2-201ENST00000394053 MDN1Q9NU22 5596 aa2.84□□□□□ -1.95
MTHFD2-201ENST00000394053 KRTAP4-6Q9BYQ5 205 aa2.81□□□□□ -1.96
MTHFD2-201ENST00000394053 NEBP20929 6669 aa2.78□□□□□ -1.97
MTHFD2-201ENST00000394053 KRTAP4-12Q9BQ66 201 aa2.76□□□□□ -1.97
MTHFD2-201ENST00000394053 KRTAP9-9Q9BYP9 154 aa2.63□□□□□ -1.99
MTHFD2-201ENST00000394053 KRTAP20-2Q3LI61 65 aa2.58□□□□□ -2
MTHFD2-201ENST00000394053 MUC19Q7Z5P9 8384 aa2.51□□□□□ -2.01
MTHFD2-201ENST00000394053 KRTAP5-5Q701N2 237 aaPredicted RBP2.49□□□□□ -2.01
MTHFD2-201ENST00000394053 GPR98Q8WXG9 6306 aa2.43□□□□□ -2.02
MTHFD2-201ENST00000394053 KRTAP5-4Q6L8H1 288 aa2.38□□□□□ -2.03
MTHFD2-201ENST00000394053 LCE1CQ5T751 118 aa2.35□□□□□ -2.03
MTHFD2-201ENST00000394053 LCE1EQ5T753 118 aa2.35□□□□□ -2.03
MTHFD2-201ENST00000394053 LCE1FQ5T754 118 aa2.35□□□□□ -2.03
MTHFD2-201ENST00000394053 KRTAP4-11Q9BYQ6 195 aa2.35□□□□□ -2.03
MTHFD2-201ENST00000394053 MUC5ACP98088 5654 aa2.3□□□□□ -2.04
MTHFD2-201ENST00000394053 HMCN1Q96RW7 5635 aa2.21□□□□□ -2.06
MTHFD2-201ENST00000394053 KRTAP4-2Q9BYR5 136 aa2.19□□□□□ -2.06
MTHFD2-201ENST00000394053 KRTAP5-3Q6L8H2 238 aa2.18□□□□□ -2.06
MTHFD2-201ENST00000394053 KRTAP4-4Q9BYR3 166 aa2.13□□□□□ -2.07
MTHFD2-201ENST00000394053 KRTAP5-2Q701N4 177 aa2.08□□□□□ -2.08
MTHFD2-201ENST00000394053 AHNAK2Q8IVF2 5795 aa2.08□□□□□ -2.08
MTHFD2-201ENST00000394053 KRTAP5-8O75690 187 aa2□□□□□ -2.09
MTHFD2-201ENST00000394053 KRTAP5-10Q6L8G5 202 aa1.87□□□□□ -2.11
MTHFD2-201ENST00000394053 KRTAP5-1Q6L8H4 278 aa1.85□□□□□ -2.11
MTHFD2-201ENST00000394053 AHNAKQ09666 5890 aaKnown RBP1.75□□□□□ -2.13
MTHFD2-201ENST00000394053 KRTAP5-11Q6L8G4 156 aa1.73□□□□□ -2.13
MTHFD2-201ENST00000394053 MUC5BQ9HC84 5762 aaPredicted RBP1.73□□□□□ -2.13
MTHFD2-201ENST00000394053 KRTAP21-2Q3LI59 83 aa1.7□□□□□ -2.14
MTHFD2-201ENST00000394053 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.63□□□□□ -2.15
MTHFD2-201ENST00000394053 KRTAP5-7Q6L8G8 165 aa1.54□□□□□ -2.16
MTHFD2-201ENST00000394053 PHGR1C9JFL3 82 aa1.54□□□□□ -2.16
MTHFD2-201ENST00000394053 KRTAP21-1Q3LI58 79 aa1.34□□□□□ -2.2
MTHFD2-201ENST00000394053 MUC16Q8WXI7 14507 aa0.99□□□□□ -2.25
Retrieved 77 of 20,778 RNA–protein pairs in 5.6 ms