RNA–Protein interactions for RNA: ENST00000393609.7

ARAP1-204, Transcript of ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene ARAP1, Length 5,145 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARAP1-204ENST00000393609 KRTAP9-6A0A140TA67 174 aa4.51□□□□□ -1.69
ARAP1-204ENST00000393609 MT1LQ93083 61 aa4.51□□□□□ -1.69
ARAP1-204ENST00000393609 LCE3BQ5TA77 95 aa4.47□□□□□ -1.69
ARAP1-204ENST00000393609 MT1MQ8N339 61 aa4.37□□□□□ -1.71
ARAP1-204ENST00000393609 KRTAP4-7Q9BYR0 210 aa4.35□□□□□ -1.71
ARAP1-204ENST00000393609 MUC2Q02817 5179 aa4.28□□□□□ -1.72
ARAP1-204ENST00000393609 KRTAP19-7Q3SYF9 63 aa4.25□□□□□ -1.73
ARAP1-204ENST00000393609 LCE3DQ9BYE3 92 aa4.22□□□□□ -1.73
ARAP1-204ENST00000393609 KRTAP6-3Q3LI67 103 aa4.21□□□□□ -1.74
ARAP1-204ENST00000393609 SYNE1Q8NF91 8797 aaKnown RBP4.2□□□□□ -1.74
ARAP1-204ENST00000393609 LCE3EQ5T5B0 92 aa4.2□□□□□ -1.74
ARAP1-204ENST00000393609 KRTAP9-7A8MTY7 169 aa4.2□□□□□ -1.74
ARAP1-204ENST00000393609 MT4P47944 62 aa4.16□□□□□ -1.74
ARAP1-204ENST00000393609 KRTAP4-3Q9BYR4 195 aa4.15□□□□□ -1.74
ARAP1-204ENST00000393609 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.14□□□□□ -1.75
ARAP1-204ENST00000393609 KRTAP2-3P0C7H8 128 aa4.13□□□□□ -1.75
ARAP1-204ENST00000393609 KRTAP2-4Q9BYR9 128 aa4.13□□□□□ -1.75
ARAP1-204ENST00000393609 KRTAP2-1Q9BYU5 128 aa4.13□□□□□ -1.75
ARAP1-204ENST00000393609 LCE1AQ5T7P2 110 aa4.12□□□□□ -1.75
ARAP1-204ENST00000393609 LOC100996750A0A140TA64 210 aa4.11□□□□□ -1.75
ARAP1-204ENST00000393609 MT3P25713 68 aa4.11□□□□□ -1.75
ARAP1-204ENST00000393609 KRTAP20-1Q3LI63 56 aa4.11□□□□□ -1.75
ARAP1-204ENST00000393609 SYNE2Q8WXH0 6885 aaKnown RBP4.05□□□□□ -1.76
ARAP1-204ENST00000393609 MT1AP04731 61 aa4.02□□□□□ -1.77
ARAP1-204ENST00000393609 LCE5AQ5TCM9 118 aa3.97□□□□□ -1.77
ARAP1-204ENST00000393609 USH2AO75445 5202 aa3.95□□□□□ -1.78
ARAP1-204ENST00000393609 PRM1P04553 51 aa3.9□□□□□ -1.79
ARAP1-204ENST00000393609 KRTAP2-2Q9BYT5 123 aa3.87□□□□□ -1.79
ARAP1-204ENST00000393609 LCE4AQ5TA78 99 aa3.86□□□□□ -1.79
ARAP1-204ENST00000393609 KRTAP9-6A8MVA2 160 aa3.83□□□□□ -1.8
ARAP1-204ENST00000393609 LCE1DQ5T752 114 aa3.8□□□□□ -1.8
ARAP1-204ENST00000393609 KRTAP6-1Q3LI64 71 aa3.76□□□□□ -1.81
ARAP1-204ENST00000393609 LCE1BQ5T7P3 118 aa3.76□□□□□ -1.81
ARAP1-204ENST00000393609 OBSCNQ5VST9 7968 aa3.75□□□□□ -1.81
ARAP1-204ENST00000393609 KRTAP9-4Q9BYQ2 154 aa3.73□□□□□ -1.81
ARAP1-204ENST00000393609 KRTAP5-9P26371 169 aa3.72□□□□□ -1.81
ARAP1-204ENST00000393609 FCGBPQ9Y6R7 5405 aaPredicted RBP3.72□□□□□ -1.81
ARAP1-204ENST00000393609 KRTAP4-9Q9BYQ8 210 aa3.72□□□□□ -1.81
ARAP1-204ENST00000393609 SSPOA2VEC9 5147 aa3.68□□□□□ -1.82
ARAP1-204ENST00000393609 KRTAP6-2Q3LI66 62 aa3.68□□□□□ -1.82
ARAP1-204ENST00000393609 MACF1Q9UPN3 7388 aaKnown RBP3.66□□□□□ -1.82
ARAP1-204ENST00000393609 DSTQ03001 7570 aaKnown RBP3.65□□□□□ -1.83
ARAP1-204ENST00000393609 KMT2DO14686 5537 aa3.62□□□□□ -1.83
ARAP1-204ENST00000393609 NEBP20929 6669 aa3.62□□□□□ -1.83
ARAP1-204ENST00000393609 MUC12Q9UKN1 5478 aa3.47□□□□□ -1.85
ARAP1-204ENST00000393609 MDN1Q9NU22 5596 aa3.34□□□□□ -1.87
ARAP1-204ENST00000393609 KRTAP4-6Q9BYQ5 205 aa3.29□□□□□ -1.88
ARAP1-204ENST00000393609 KRTAP20-2Q3LI61 65 aa3.29□□□□□ -1.88
ARAP1-204ENST00000393609 KRTAP9-9Q9BYP9 154 aa3.22□□□□□ -1.89
ARAP1-204ENST00000393609 KRTAP5-4Q6L8H1 288 aa3.16□□□□□ -1.9
ARAP1-204ENST00000393609 LCE1CQ5T751 118 aa3.14□□□□□ -1.91
ARAP1-204ENST00000393609 LCE1EQ5T753 118 aa3.14□□□□□ -1.91
ARAP1-204ENST00000393609 LCE1FQ5T754 118 aa3.14□□□□□ -1.91
ARAP1-204ENST00000393609 GPR98Q8WXG9 6306 aa3.14□□□□□ -1.91
ARAP1-204ENST00000393609 KRTAP5-5Q701N2 237 aaPredicted RBP3.06□□□□□ -1.92
ARAP1-204ENST00000393609 KRTAP4-11Q9BYQ6 195 aa2.95□□□□□ -1.94
ARAP1-204ENST00000393609 MUC19Q7Z5P9 8384 aa2.94□□□□□ -1.94
ARAP1-204ENST00000393609 KRTAP5-3Q6L8H2 238 aa2.78□□□□□ -1.96
ARAP1-204ENST00000393609 MUC5ACP98088 5654 aa2.69□□□□□ -1.98
ARAP1-204ENST00000393609 KRTAP4-12Q9BQ66 201 aa2.69□□□□□ -1.98
ARAP1-204ENST00000393609 KRTAP4-2Q9BYR5 136 aa2.69□□□□□ -1.98
ARAP1-204ENST00000393609 KRTAP4-4Q9BYR3 166 aa2.62□□□□□ -1.99
ARAP1-204ENST00000393609 HMCN1Q96RW7 5635 aa2.6□□□□□ -1.99
ARAP1-204ENST00000393609 KRTAP5-2Q701N4 177 aa2.6□□□□□ -1.99
ARAP1-204ENST00000393609 AHNAK2Q8IVF2 5795 aa2.59□□□□□ -1.99
ARAP1-204ENST00000393609 KRTAP5-8O75690 187 aa2.53□□□□□ -2.01
ARAP1-204ENST00000393609 KRTAP5-10Q6L8G5 202 aa2.32□□□□□ -2.04
ARAP1-204ENST00000393609 KRTAP5-1Q6L8H4 278 aa2.26□□□□□ -2.05
ARAP1-204ENST00000393609 MUC5BQ9HC84 5762 aaPredicted RBP2.23□□□□□ -2.05
ARAP1-204ENST00000393609 AHNAKQ09666 5890 aaKnown RBP2.21□□□□□ -2.06
ARAP1-204ENST00000393609 KRTAP5-11Q6L8G4 156 aa2.21□□□□□ -2.06
ARAP1-204ENST00000393609 KRTAP5-7Q6L8G8 165 aa2.11□□□□□ -2.07
ARAP1-204ENST00000393609 PHGR1C9JFL3 82 aa2.09□□□□□ -2.07
ARAP1-204ENST00000393609 KRTAP21-2Q3LI59 83 aa2.04□□□□□ -2.08
ARAP1-204ENST00000393609 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.04□□□□□ -2.08
ARAP1-204ENST00000393609 KRTAP21-1Q3LI58 79 aa1.99□□□□□ -2.09
ARAP1-204ENST00000393609 MUC16Q8WXI7 14507 aa1.25□□□□□ -2.21
Retrieved 77 of 20,778 RNA–protein pairs in 13.7 ms