RNA–Protein interactions for RNA: ENST00000393357.6

PHTF1-205, Transcript of putative homeodomain transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PHTF1, Length 3,244 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF1-205ENST00000393357 KRTAP2-3P0C7H8 128 aa5.52□□□□□ -1.53
PHTF1-205ENST00000393357 KRTAP2-4Q9BYR9 128 aa5.52□□□□□ -1.53
PHTF1-205ENST00000393357 KRTAP2-1Q9BYU5 128 aa5.52□□□□□ -1.53
PHTF1-205ENST00000393357 MT1GP13640 62 aa5.47□□□□□ -1.53
PHTF1-205ENST00000393357 MT1LQ93083 61 aa5.44□□□□□ -1.54
PHTF1-205ENST00000393357 SSPOA2VEC9 5147 aa5.41□□□□□ -1.54
PHTF1-205ENST00000393357 KRTAP12-4P60329 112 aa5.4□□□□□ -1.54
PHTF1-205ENST00000393357 MT1EP04732 61 aa5.36□□□□□ -1.55
PHTF1-205ENST00000393357 KRTAP4-9Q9BYQ8 210 aa5.31□□□□□ -1.56
PHTF1-205ENST00000393357 SYNE2Q8WXH0 6885 aaKnown RBP5.3□□□□□ -1.56
PHTF1-205ENST00000393357 LCE3BQ5TA77 95 aa5.25□□□□□ -1.57
PHTF1-205ENST00000393357 LCE2DQ5TA82 110 aaPredicted RBP5.07□□□□□ -1.6
PHTF1-205ENST00000393357 KRTAP19-6Q3LI70 58 aa5.06□□□□□ -1.6
PHTF1-205ENST00000393357 KRTAP19-4Q3LI73 84 aa5.04□□□□□ -1.6
PHTF1-205ENST00000393357 MT1MQ8N339 61 aa5.03□□□□□ -1.6
PHTF1-205ENST00000393357 KRTAP19-3Q7Z4W3 81 aa4.95□□□□□ -1.62
PHTF1-205ENST00000393357 SPRR2FQ96RM1 72 aa4.95□□□□□ -1.62
PHTF1-205ENST00000393357 KRTAP9-7A8MTY7 169 aa4.93□□□□□ -1.62
PHTF1-205ENST00000393357 MACF1Q9UPN3 7388 aaKnown RBP4.88□□□□□ -1.63
PHTF1-205ENST00000393357 MDN1Q9NU22 5596 aa4.86□□□□□ -1.63
PHTF1-205ENST00000393357 PRM1P04553 51 aa4.85□□□□□ -1.63
PHTF1-205ENST00000393357 KRTAP9-2Q9BYQ4 174 aa4.82□□□□□ -1.64
PHTF1-205ENST00000393357 LCE3DQ9BYE3 92 aa4.79□□□□□ -1.64
PHTF1-205ENST00000393357 KRTAP6-1Q3LI64 71 aa4.78□□□□□ -1.64
PHTF1-205ENST00000393357 LCE3EQ5T5B0 92 aa4.7□□□□□ -1.66
PHTF1-205ENST00000393357 LCE5AQ5TCM9 118 aa4.63□□□□□ -1.67
PHTF1-205ENST00000393357 KRTAP5-5Q701N2 237 aaPredicted RBP4.6□□□□□ -1.67
PHTF1-205ENST00000393357 KRTAP6-2Q3LI66 62 aa4.51□□□□□ -1.69
PHTF1-205ENST00000393357 MT1AP04731 61 aa4.45□□□□□ -1.7
PHTF1-205ENST00000393357 KRTAP5-9P26371 169 aa4.33□□□□□ -1.72
PHTF1-205ENST00000393357 LCE1AQ5T7P2 110 aa4.31□□□□□ -1.72
PHTF1-205ENST00000393357 SPRR2EP22531 72 aa4.29□□□□□ -1.72
PHTF1-205ENST00000393357 SPRR2BP35325 72 aa4.29□□□□□ -1.72
PHTF1-205ENST00000393357 SPRR2AP35326 72 aa4.29□□□□□ -1.72
PHTF1-205ENST00000393357 KRTAP9-6A0A140TA67 174 aa4.27□□□□□ -1.73
PHTF1-205ENST00000393357 KRTAP6-3Q3LI67 103 aa4.25□□□□□ -1.73
PHTF1-205ENST00000393357 KRTAP9-4Q9BYQ2 154 aa4.17□□□□□ -1.74
PHTF1-205ENST00000393357 KRTAP2-2Q9BYT5 123 aa4.14□□□□□ -1.75
PHTF1-205ENST00000393357 MT3P25713 68 aa4.05□□□□□ -1.76
PHTF1-205ENST00000393357 SPRR2DP22532 72 aa4.04□□□□□ -1.76
PHTF1-205ENST00000393357 LCE1EQ5T753 118 aa4□□□□□ -1.77
PHTF1-205ENST00000393357 MUC19Q7Z5P9 8384 aa3.93□□□□□ -1.78
PHTF1-205ENST00000393357 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.93□□□□□ -1.78
PHTF1-205ENST00000393357 MT4P47944 62 aa3.89□□□□□ -1.79
PHTF1-205ENST00000393357 KRTAP4-6Q9BYQ5 205 aa3.78□□□□□ -1.8
PHTF1-205ENST00000393357 LCE1DQ5T752 114 aa3.78□□□□□ -1.81
PHTF1-205ENST00000393357 KRTAP4-11Q9BYQ6 195 aa3.76□□□□□ -1.81
PHTF1-205ENST00000393357 KRTAP5-4Q6L8H1 288 aa3.74□□□□□ -1.81
PHTF1-205ENST00000393357 LCE1BQ5T7P3 118 aa3.7□□□□□ -1.82
PHTF1-205ENST00000393357 MUC5ACP98088 5654 aa3.68□□□□□ -1.82
PHTF1-205ENST00000393357 NEBP20929 6669 aa3.65□□□□□ -1.83
PHTF1-205ENST00000393357 HMCN1Q96RW7 5635 aa3.51□□□□□ -1.85
PHTF1-205ENST00000393357 LCE4AQ5TA78 99 aa3.5□□□□□ -1.85
PHTF1-205ENST00000393357 KRTAP20-2Q3LI61 65 aa3.49□□□□□ -1.85
PHTF1-205ENST00000393357 KRTAP5-2Q701N4 177 aa3.49□□□□□ -1.85
PHTF1-205ENST00000393357 KRTAP5-3Q6L8H2 238 aa3.35□□□□□ -1.87
PHTF1-205ENST00000393357 KRTAP20-1Q3LI63 56 aa3.31□□□□□ -1.88
PHTF1-205ENST00000393357 KRTAP5-10Q6L8G5 202 aa3.29□□□□□ -1.88
PHTF1-205ENST00000393357 KRTAP4-4Q9BYR3 166 aa3.25□□□□□ -1.89
PHTF1-205ENST00000393357 KRTAP4-2Q9BYR5 136 aa2.99□□□□□ -1.93
PHTF1-205ENST00000393357 KRTAP5-1Q6L8H4 278 aa2.98□□□□□ -1.93
PHTF1-205ENST00000393357 LCE1CQ5T751 118 aa2.98□□□□□ -1.93
PHTF1-205ENST00000393357 MUC5BQ9HC84 5762 aaPredicted RBP2.95□□□□□ -1.94
PHTF1-205ENST00000393357 LCE1FQ5T754 118 aa2.93□□□□□ -1.94
PHTF1-205ENST00000393357 KRTAP21-2Q3LI59 83 aa2.9□□□□□ -1.95
PHTF1-205ENST00000393357 KRTAP4-12Q9BQ66 201 aa2.89□□□□□ -1.95
PHTF1-205ENST00000393357 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.82□□□□□ -1.96
PHTF1-205ENST00000393357 KRTAP5-8O75690 187 aa2.79□□□□□ -1.96
PHTF1-205ENST00000393357 KRTAP5-7Q6L8G8 165 aa2.77□□□□□ -1.97
PHTF1-205ENST00000393357 AHNAK2Q8IVF2 5795 aa2.75□□□□□ -1.97
PHTF1-205ENST00000393357 KRTAP21-1Q3LI58 79 aa2.74□□□□□ -1.97
PHTF1-205ENST00000393357 KRTAP9-9Q9BYP9 154 aa2.73□□□□□ -1.97
PHTF1-205ENST00000393357 KRTAP5-11Q6L8G4 156 aa2.56□□□□□ -2
PHTF1-205ENST00000393357 GPR98Q8WXG9 6306 aa2.38□□□□□ -2.03
PHTF1-205ENST00000393357 PHGR1C9JFL3 82 aa2.21□□□□□ -2.06
PHTF1-205ENST00000393357 AHNAKQ09666 5890 aaKnown RBP2.01□□□□□ -2.09
PHTF1-205ENST00000393357 MUC16Q8WXI7 14507 aa1.52□□□□□ -2.17
Retrieved 77 of 20,778 RNA–protein pairs in 232 ms