RNA–Protein interactions for RNA: ENST00000390468.1

TRAV41-201, Transcript of T cell receptor alpha variable 41, humanhuman

APPRIS P1 BASIC

Gene TRAV41, Length 336 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV41-201ENST00000390468 FLGP20930 4061 aaPredicted RBP1.25□□□□□ -2.21
TRAV41-201ENST00000390468 HMCN2Q8NDA2 5059 aa1.25□□□□□ -2.21
TRAV41-201ENST00000390468 RNF213Q63HN8 5207 aa1.24□□□□□ -2.21
TRAV41-201ENST00000390468 SPRR5A0A1B0GTR4 108 aa1.22□□□□□ -2.21
TRAV41-201ENST00000390468 KRTAP5-5Q701N2 237 aaPredicted RBP1.22□□□□□ -2.21
TRAV41-201ENST00000390468 UBR4Q5T4S7 5183 aa1.2□□□□□ -2.22
TRAV41-201ENST00000390468 KRTAP4-1Q9BYQ7 146 aa1.2□□□□□ -2.22
TRAV41-201ENST00000390468 MUC2Q02817 5179 aa1.19□□□□□ -2.22
TRAV41-201ENST00000390468 TNP1P09430 55 aa1.18□□□□□ -2.22
TRAV41-201ENST00000390468 LCE1CQ5T751 118 aa1.17□□□□□ -2.22
TRAV41-201ENST00000390468 LCE1BQ5T7P3 118 aa1.17□□□□□ -2.22
TRAV41-201ENST00000390468 FAT4Q6V0I7 4981 aa1.16□□□□□ -2.22
TRAV41-201ENST00000390468 M0R2T5 61 aa1.16□□□□□ -2.22
TRAV41-201ENST00000390468 KRTAP19-2Q3LHN2 52 aa1.15□□□□□ -2.23
TRAV41-201ENST00000390468 KRTAP5-8O75690 187 aa1.14□□□□□ -2.23
TRAV41-201ENST00000390468 MT1HP80294 61 aa1.13□□□□□ -2.23
TRAV41-201ENST00000390468 KRTAP10-10P60014 251 aa1.09□□□□□ -2.23
TRAV41-201ENST00000390468 MT2AP02795 61 aa1.08□□□□□ -2.24
TRAV41-201ENST00000390468 MT1FP04733 61 aa1.08□□□□□ -2.24
TRAV41-201ENST00000390468 SPRR2GQ9BYE4 73 aa1.06□□□□□ -2.24
TRAV41-201ENST00000390468 USH2AO75445 5202 aa1.04□□□□□ -2.24
TRAV41-201ENST00000390468 LCE3DQ9BYE3 92 aa1.04□□□□□ -2.24
TRAV41-201ENST00000390468 KRTAP19-8Q3LI54 63 aa1.03□□□□□ -2.24
TRAV41-201ENST00000390468 MUC19Q7Z5P9 8384 aa1.01□□□□□ -2.25
TRAV41-201ENST00000390468 MT1BP07438 61 aa1.01□□□□□ -2.25
TRAV41-201ENST00000390468 SSPOA2VEC9 5147 aa1.01□□□□□ -2.25
TRAV41-201ENST00000390468 KRTAP8-1Q8IUC2 63 aa0.99□□□□□ -2.25
TRAV41-201ENST00000390468 MT1XP80297 61 aa0.98□□□□□ -2.25
TRAV41-201ENST00000390468 KMT2DO14686 5537 aa0.98□□□□□ -2.25
TRAV41-201ENST00000390468 KRTAP12-3P60328 96 aa0.97□□□□□ -2.25
TRAV41-201ENST00000390468 KRTAP19-6Q3LI70 58 aa0.96□□□□□ -2.26
TRAV41-201ENST00000390468 KRTAP5-7Q6L8G8 165 aa0.96□□□□□ -2.26
TRAV41-201ENST00000390468 FSIP2Q5CZC0 6907 aa0.93□□□□□ -2.26
TRAV41-201ENST00000390468 KRTAP2-3P0C7H8 128 aa0.92□□□□□ -2.26
TRAV41-201ENST00000390468 KRTAP2-4Q9BYR9 128 aa0.92□□□□□ -2.26
TRAV41-201ENST00000390468 KRTAP2-1Q9BYU5 128 aa0.92□□□□□ -2.26
TRAV41-201ENST00000390468 CRCT1Q9UGL9 99 aa0.92□□□□□ -2.26
TRAV41-201ENST00000390468 FCGBPQ9Y6R7 5405 aaPredicted RBP0.92□□□□□ -2.26
TRAV41-201ENST00000390468 KRTAP19-5Q3LI72 72 aa0.9□□□□□ -2.27
TRAV41-201ENST00000390468 MUC12Q9UKN1 5478 aa0.88□□□□□ -2.27
TRAV41-201ENST00000390468 KRTAP12-4P60329 112 aa0.88□□□□□ -2.27
TRAV41-201ENST00000390468 KRTAP19-7Q3SYF9 63 aa0.88□□□□□ -2.27
TRAV41-201ENST00000390468 SPRR2FQ96RM1 72 aa0.88□□□□□ -2.27
TRAV41-201ENST00000390468 SYNE2Q8WXH0 6885 aaKnown RBP0.88□□□□□ -2.27
TRAV41-201ENST00000390468 MT1EP04732 61 aa0.87□□□□□ -2.27
TRAV41-201ENST00000390468 KRTAP21-2Q3LI59 83 aa0.86□□□□□ -2.27
TRAV41-201ENST00000390468 KRTAP19-3Q7Z4W3 81 aa0.85□□□□□ -2.27
TRAV41-201ENST00000390468 MT1LQ93083 61 aa0.84□□□□□ -2.27
TRAV41-201ENST00000390468 MT1GP13640 62 aa0.83□□□□□ -2.28
TRAV41-201ENST00000390468 SPRR2EP22531 72 aa0.83□□□□□ -2.28
TRAV41-201ENST00000390468 SPRR2BP35325 72 aa0.83□□□□□ -2.28
TRAV41-201ENST00000390468 SPRR2AP35326 72 aa0.83□□□□□ -2.28
TRAV41-201ENST00000390468 KRTAP6-3Q3LI67 103 aa0.83□□□□□ -2.28
TRAV41-201ENST00000390468 MT1MQ8N339 61 aa0.83□□□□□ -2.28
TRAV41-201ENST00000390468 MACF1Q9UPN3 7388 aaKnown RBP0.83□□□□□ -2.28
TRAV41-201ENST00000390468 MDN1Q9NU22 5596 aa0.81□□□□□ -2.28
TRAV41-201ENST00000390468 PRM1P04553 51 aa0.81□□□□□ -2.28
TRAV41-201ENST00000390468 SPRR2DP22532 72 aa0.8□□□□□ -2.28
TRAV41-201ENST00000390468 MT1AP04731 61 aa0.77□□□□□ -2.29
TRAV41-201ENST00000390468 GPR98Q8WXG9 6306 aa0.77□□□□□ -2.29
TRAV41-201ENST00000390468 NEBP20929 6669 aa0.76□□□□□ -2.29
TRAV41-201ENST00000390468 KRTAP20-1Q3LI63 56 aa0.73□□□□□ -2.29
TRAV41-201ENST00000390468 DSTQ03001 7570 aaKnown RBP0.72□□□□□ -2.29
TRAV41-201ENST00000390468 KRTAP6-1Q3LI64 71 aa0.72□□□□□ -2.29
TRAV41-201ENST00000390468 MT4P47944 62 aa0.7□□□□□ -2.3
TRAV41-201ENST00000390468 KRTAP6-2Q3LI66 62 aa0.7□□□□□ -2.3
TRAV41-201ENST00000390468 SYNE1Q8NF91 8797 aaKnown RBP0.67□□□□□ -2.3
TRAV41-201ENST00000390468 HMCN1Q96RW7 5635 aa0.67□□□□□ -2.3
TRAV41-201ENST00000390468 KRTAP20-2Q3LI61 65 aa0.66□□□□□ -2.3
TRAV41-201ENST00000390468 AHNAK2Q8IVF2 5795 aa0.64□□□□□ -2.31
TRAV41-201ENST00000390468 AHNAKQ09666 5890 aaKnown RBP0.59□□□□□ -2.31
TRAV41-201ENST00000390468 MUC5BQ9HC84 5762 aaPredicted RBP0.57□□□□□ -2.32
TRAV41-201ENST00000390468 KRTAP5-10Q6L8G5 202 aa0.57□□□□□ -2.32
TRAV41-201ENST00000390468 MUC5ACP98088 5654 aa0.55□□□□□ -2.32
TRAV41-201ENST00000390468 KRTAP21-1Q3LI58 79 aa0.53□□□□□ -2.32
TRAV41-201ENST00000390468 PHGR1C9JFL3 82 aa0.39□□□□□ -2.35
TRAV41-201ENST00000390468 MUC16Q8WXI7 14507 aa0.34□□□□□ -2.36
Retrieved 77 of 20,778 RNA–protein pairs in 6.1 ms