RNA–Protein interactions for RNA: ENST00000387069.1

RNU11-201, Transcript of RNA, U11 small nuclear, humanhuman

BASIC

Gene RNU11, Length 134 nt, Biotype snRNA, Subcellular localisation Cytoplasm, Cytosol, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU11-201ENST00000387069 PCLOQ9Y6V0 5065 aa1.7□□□□□ -2.14
RNU11-201ENST00000387069 KRTAP19-3Q7Z4W3 81 aa1.7□□□□□ -2.14
RNU11-201ENST00000387069 KRTAP5-5Q701N2 237 aaPredicted RBP1.69□□□□□ -2.14
RNU11-201ENST00000387069 SPRR2FQ96RM1 72 aa1.69□□□□□ -2.14
RNU11-201ENST00000387069 LCE1AQ5T7P2 110 aa1.67□□□□□ -2.14
RNU11-201ENST00000387069 SPRR2AP35326 72 aa1.66□□□□□ -2.14
RNU11-201ENST00000387069 LCE3BQ5TA77 95 aa1.66□□□□□ -2.14
RNU11-201ENST00000387069 LOC100996750A0A140TA64 210 aa1.64□□□□□ -2.15
RNU11-201ENST00000387069 KRTAP9-7A8MTY7 169 aa1.64□□□□□ -2.15
RNU11-201ENST00000387069 UBR4Q5T4S7 5183 aa1.64□□□□□ -2.15
RNU11-201ENST00000387069 EPPK1P58107 5090 aaKnown RBP1.61□□□□□ -2.15
RNU11-201ENST00000387069 KRTAP6-2Q3LI66 62 aa1.61□□□□□ -2.15
RNU11-201ENST00000387069 SPRR2BP35325 72 aa1.6□□□□□ -2.15
RNU11-201ENST00000387069 CRCT1Q9UGL9 99 aa1.6□□□□□ -2.15
RNU11-201ENST00000387069 KRTAP19-6Q3LI70 58 aa1.59□□□□□ -2.15
RNU11-201ENST00000387069 LCE5AQ5TCM9 118 aa1.59□□□□□ -2.15
RNU11-201ENST00000387069 KRTAP4-3Q9BYR4 195 aa1.58□□□□□ -2.16
RNU11-201ENST00000387069 SPRR2EP22531 72 aa1.57□□□□□ -2.16
RNU11-201ENST00000387069 KRTAP6-1Q3LI64 71 aa1.55□□□□□ -2.16
RNU11-201ENST00000387069 LCE2DQ5TA82 110 aaPredicted RBP1.55□□□□□ -2.16
RNU11-201ENST00000387069 KRTAP4-9Q9BYQ8 210 aa1.55□□□□□ -2.16
RNU11-201ENST00000387069 SYNE1Q8NF91 8797 aaKnown RBP1.54□□□□□ -2.16
RNU11-201ENST00000387069 LCE2AQ5TA79 106 aaPredicted RBP1.53□□□□□ -2.16
RNU11-201ENST00000387069 SPRR2DP22532 72 aa1.52□□□□□ -2.17
RNU11-201ENST00000387069 FAT4Q6V0I7 4981 aa1.51□□□□□ -2.17
RNU11-201ENST00000387069 KRTAP9-4Q9BYQ2 154 aa1.5□□□□□ -2.17
RNU11-201ENST00000387069 MT3P25713 68 aa1.49□□□□□ -2.17
RNU11-201ENST00000387069 LCE1EQ5T753 118 aa1.49□□□□□ -2.17
RNU11-201ENST00000387069 LCE1DQ5T752 114 aa1.46□□□□□ -2.18
RNU11-201ENST00000387069 RNF213Q63HN8 5207 aa1.44□□□□□ -2.18
RNU11-201ENST00000387069 SSPOA2VEC9 5147 aa1.39□□□□□ -2.19
RNU11-201ENST00000387069 KMT2DO14686 5537 aa1.36□□□□□ -2.19
RNU11-201ENST00000387069 USH2AO75445 5202 aa1.32□□□□□ -2.2
RNU11-201ENST00000387069 LCE1FQ5T754 118 aa1.3□□□□□ -2.2
RNU11-201ENST00000387069 KRTAP5-9P26371 169 aa1.27□□□□□ -2.21
RNU11-201ENST00000387069 KRTAP5-10Q6L8G5 202 aa1.23□□□□□ -2.21
RNU11-201ENST00000387069 KRTAP4-11Q9BYQ6 195 aa1.23□□□□□ -2.21
RNU11-201ENST00000387069 KRTAP21-1Q3LI58 79 aa1.21□□□□□ -2.22
RNU11-201ENST00000387069 KRTAP5-4Q6L8H1 288 aa1.21□□□□□ -2.22
RNU11-201ENST00000387069 KRTAP5-1Q6L8H4 278 aa1.21□□□□□ -2.22
RNU11-201ENST00000387069 OBSCNQ5VST9 7968 aa1.18□□□□□ -2.22
RNU11-201ENST00000387069 KRTAP5-2Q701N4 177 aa1.18□□□□□ -2.22
RNU11-201ENST00000387069 KRTAP9-1A8MXZ3 250 aaPredicted RBP1.15□□□□□ -2.23
RNU11-201ENST00000387069 FCGBPQ9Y6R7 5405 aaPredicted RBP1.14□□□□□ -2.23
RNU11-201ENST00000387069 DSTQ03001 7570 aaKnown RBP1.13□□□□□ -2.23
RNU11-201ENST00000387069 LCE4AQ5TA78 99 aa1.12□□□□□ -2.23
RNU11-201ENST00000387069 MUC12Q9UKN1 5478 aa1.12□□□□□ -2.23
RNU11-201ENST00000387069 LCE1CQ5T751 118 aa1.09□□□□□ -2.23
RNU11-201ENST00000387069 LCE1BQ5T7P3 118 aa1.09□□□□□ -2.23
RNU11-201ENST00000387069 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.09□□□□□ -2.23
RNU11-201ENST00000387069 KRTAP20-2Q3LI61 65 aa1.07□□□□□ -2.24
RNU11-201ENST00000387069 MDN1Q9NU22 5596 aa1.05□□□□□ -2.24
RNU11-201ENST00000387069 SYNE2Q8WXH0 6885 aaKnown RBP1.02□□□□□ -2.25
RNU11-201ENST00000387069 KRTAP9-9Q9BYP9 154 aa1.02□□□□□ -2.25
RNU11-201ENST00000387069 MUC5ACP98088 5654 aa1.02□□□□□ -2.25
RNU11-201ENST00000387069 KRTAP21-2Q3LI59 83 aa1.01□□□□□ -2.25
RNU11-201ENST00000387069 KRTAP20-1Q3LI63 56 aa1□□□□□ -2.25
RNU11-201ENST00000387069 KRTAP4-2Q9BYR5 136 aa1□□□□□ -2.25
RNU11-201ENST00000387069 KRTAP5-3Q6L8H2 238 aa0.99□□□□□ -2.25
RNU11-201ENST00000387069 KRTAP4-6Q9BYQ5 205 aa0.96□□□□□ -2.26
RNU11-201ENST00000387069 GPR98Q8WXG9 6306 aa0.96□□□□□ -2.26
RNU11-201ENST00000387069 MACF1Q9UPN3 7388 aaKnown RBP0.94□□□□□ -2.26
RNU11-201ENST00000387069 MT4P47944 62 aa0.94□□□□□ -2.26
RNU11-201ENST00000387069 FSIP2Q5CZC0 6907 aa0.92□□□□□ -2.26
RNU11-201ENST00000387069 KRTAP5-8O75690 187 aa0.92□□□□□ -2.26
RNU11-201ENST00000387069 KRTAP5-11Q6L8G4 156 aa0.92□□□□□ -2.26
RNU11-201ENST00000387069 KRTAP5-7Q6L8G8 165 aa0.89□□□□□ -2.27
RNU11-201ENST00000387069 HMCN1Q96RW7 5635 aa0.78□□□□□ -2.28
RNU11-201ENST00000387069 KRTAP4-4Q9BYR3 166 aa0.78□□□□□ -2.28
RNU11-201ENST00000387069 MUC5BQ9HC84 5762 aaPredicted RBP0.77□□□□□ -2.29
RNU11-201ENST00000387069 MUC19Q7Z5P9 8384 aa0.77□□□□□ -2.29
RNU11-201ENST00000387069 NEBP20929 6669 aa0.75□□□□□ -2.29
RNU11-201ENST00000387069 PHGR1C9JFL3 82 aa0.75□□□□□ -2.29
RNU11-201ENST00000387069 AHNAKQ09666 5890 aaKnown RBP0.73□□□□□ -2.29
RNU11-201ENST00000387069 KRTAP4-12Q9BQ66 201 aa0.6□□□□□ -2.31
RNU11-201ENST00000387069 MUC16Q8WXI7 14507 aa0.58□□□□□ -2.32
RNU11-201ENST00000387069 AHNAK2Q8IVF2 5795 aa0.57□□□□□ -2.32
Retrieved 77 of 20,778 RNA–protein pairs in 11.1 ms