RNA–Protein interactions for RNA: ENST00000382020.8

TUSC3-201, Transcript of tumor suppressor candidate 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TUSC3, Length 3,683 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUSC3-201ENST00000382020 KRTAP12-4P60329 112 aa5.01□□□□□ -1.61
TUSC3-201ENST00000382020 SYNE2Q8WXH0 6885 aaKnown RBP4.97□□□□□ -1.61
TUSC3-201ENST00000382020 KRTAP19-7Q3SYF9 63 aa4.97□□□□□ -1.61
TUSC3-201ENST00000382020 LCE3BQ5TA77 95 aa4.95□□□□□ -1.62
TUSC3-201ENST00000382020 MT1LQ93083 61 aa4.94□□□□□ -1.62
TUSC3-201ENST00000382020 SPRR2FQ96RM1 72 aa4.92□□□□□ -1.62
TUSC3-201ENST00000382020 MT1EP04732 61 aa4.89□□□□□ -1.63
TUSC3-201ENST00000382020 KRTAP2-3P0C7H8 128 aa4.87□□□□□ -1.63
TUSC3-201ENST00000382020 KRTAP2-4Q9BYR9 128 aa4.87□□□□□ -1.63
TUSC3-201ENST00000382020 KRTAP2-1Q9BYU5 128 aa4.87□□□□□ -1.63
TUSC3-201ENST00000382020 KRTAP4-9Q9BYQ8 210 aa4.8□□□□□ -1.64
TUSC3-201ENST00000382020 SSPOA2VEC9 5147 aa4.8□□□□□ -1.64
TUSC3-201ENST00000382020 KRTAP19-6Q3LI70 58 aa4.63□□□□□ -1.67
TUSC3-201ENST00000382020 MT1MQ8N339 61 aa4.63□□□□□ -1.67
TUSC3-201ENST00000382020 KRTAP19-3Q7Z4W3 81 aa4.62□□□□□ -1.67
TUSC3-201ENST00000382020 LCE2DQ5TA82 110 aaPredicted RBP4.53□□□□□ -1.68
TUSC3-201ENST00000382020 MACF1Q9UPN3 7388 aaKnown RBP4.51□□□□□ -1.69
TUSC3-201ENST00000382020 PRM1P04553 51 aa4.49□□□□□ -1.69
TUSC3-201ENST00000382020 KRTAP19-4Q3LI73 84 aa4.47□□□□□ -1.69
TUSC3-201ENST00000382020 LCE3DQ9BYE3 92 aa4.47□□□□□ -1.69
TUSC3-201ENST00000382020 KRTAP9-7A8MTY7 169 aa4.4□□□□□ -1.71
TUSC3-201ENST00000382020 LCE3EQ5T5B0 92 aa4.38□□□□□ -1.71
TUSC3-201ENST00000382020 MDN1Q9NU22 5596 aa4.38□□□□□ -1.71
TUSC3-201ENST00000382020 SPRR2EP22531 72 aa4.35□□□□□ -1.71
TUSC3-201ENST00000382020 SPRR2BP35325 72 aa4.35□□□□□ -1.71
TUSC3-201ENST00000382020 SPRR2AP35326 72 aa4.35□□□□□ -1.71
TUSC3-201ENST00000382020 KRTAP9-2Q9BYQ4 174 aa4.34□□□□□ -1.71
TUSC3-201ENST00000382020 KRTAP6-1Q3LI64 71 aa4.33□□□□□ -1.72
TUSC3-201ENST00000382020 LCE5AQ5TCM9 118 aa4.2□□□□□ -1.74
TUSC3-201ENST00000382020 SPRR2DP22532 72 aa4.12□□□□□ -1.75
TUSC3-201ENST00000382020 MT1AP04731 61 aa4.09□□□□□ -1.75
TUSC3-201ENST00000382020 KRTAP6-2Q3LI66 62 aa4.08□□□□□ -1.76
TUSC3-201ENST00000382020 LCE1AQ5T7P2 110 aa3.98□□□□□ -1.77
TUSC3-201ENST00000382020 KRTAP5-5Q701N2 237 aaPredicted RBP3.97□□□□□ -1.77
TUSC3-201ENST00000382020 MT4P47944 62 aa3.94□□□□□ -1.78
TUSC3-201ENST00000382020 KRTAP5-9P26371 169 aa3.91□□□□□ -1.78
TUSC3-201ENST00000382020 KRTAP9-6A0A140TA67 174 aa3.89□□□□□ -1.79
TUSC3-201ENST00000382020 MT3P25713 68 aa3.89□□□□□ -1.79
TUSC3-201ENST00000382020 MUC19Q7Z5P9 8384 aa3.87□□□□□ -1.79
TUSC3-201ENST00000382020 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.87□□□□□ -1.79
TUSC3-201ENST00000382020 KRTAP6-3Q3LI67 103 aa3.83□□□□□ -1.8
TUSC3-201ENST00000382020 KRTAP9-4Q9BYQ2 154 aa3.81□□□□□ -1.8
TUSC3-201ENST00000382020 KRTAP2-2Q9BYT5 123 aa3.79□□□□□ -1.8
TUSC3-201ENST00000382020 LCE1DQ5T752 114 aa3.75□□□□□ -1.81
TUSC3-201ENST00000382020 LCE1EQ5T753 118 aa3.73□□□□□ -1.81
TUSC3-201ENST00000382020 LCE1BQ5T7P3 118 aa3.72□□□□□ -1.81
TUSC3-201ENST00000382020 KRTAP4-6Q9BYQ5 205 aa3.57□□□□□ -1.84
TUSC3-201ENST00000382020 KRTAP4-11Q9BYQ6 195 aa3.45□□□□□ -1.86
TUSC3-201ENST00000382020 NEBP20929 6669 aa3.44□□□□□ -1.86
TUSC3-201ENST00000382020 MUC5ACP98088 5654 aa3.4□□□□□ -1.86
TUSC3-201ENST00000382020 LCE4AQ5TA78 99 aa3.34□□□□□ -1.87
TUSC3-201ENST00000382020 KRTAP5-4Q6L8H1 288 aa3.28□□□□□ -1.88
TUSC3-201ENST00000382020 KRTAP20-1Q3LI63 56 aa3.28□□□□□ -1.88
TUSC3-201ENST00000382020 KRTAP20-2Q3LI61 65 aa3.22□□□□□ -1.89
TUSC3-201ENST00000382020 HMCN1Q96RW7 5635 aa3.21□□□□□ -1.89
TUSC3-201ENST00000382020 KRTAP4-4Q9BYR3 166 aa3.11□□□□□ -1.91
TUSC3-201ENST00000382020 KRTAP5-2Q701N4 177 aa3□□□□□ -1.93
TUSC3-201ENST00000382020 KRTAP5-3Q6L8H2 238 aa2.95□□□□□ -1.94
TUSC3-201ENST00000382020 KRTAP4-12Q9BQ66 201 aa2.88□□□□□ -1.95
TUSC3-201ENST00000382020 KRTAP4-2Q9BYR5 136 aa2.88□□□□□ -1.95
TUSC3-201ENST00000382020 LCE1FQ5T754 118 aa2.86□□□□□ -1.95
TUSC3-201ENST00000382020 KRTAP5-10Q6L8G5 202 aa2.85□□□□□ -1.95
TUSC3-201ENST00000382020 MUC5BQ9HC84 5762 aaPredicted RBP2.77□□□□□ -1.97
TUSC3-201ENST00000382020 LCE1CQ5T751 118 aa2.72□□□□□ -1.97
TUSC3-201ENST00000382020 AHNAK2Q8IVF2 5795 aa2.69□□□□□ -1.98
TUSC3-201ENST00000382020 GPR98Q8WXG9 6306 aa2.62□□□□□ -1.99
TUSC3-201ENST00000382020 KRTAP5-1Q6L8H4 278 aa2.61□□□□□ -1.99
TUSC3-201ENST00000382020 KRTAP5-8O75690 187 aa2.54□□□□□ -2
TUSC3-201ENST00000382020 KRTAP21-2Q3LI59 83 aa2.5□□□□□ -2.01
TUSC3-201ENST00000382020 KRTAP9-9Q9BYP9 154 aa2.45□□□□□ -2.02
TUSC3-201ENST00000382020 KRTAP21-1Q3LI58 79 aa2.41□□□□□ -2.02
TUSC3-201ENST00000382020 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.36□□□□□ -2.03
TUSC3-201ENST00000382020 KRTAP5-7Q6L8G8 165 aa2.36□□□□□ -2.03
TUSC3-201ENST00000382020 KRTAP5-11Q6L8G4 156 aa2.27□□□□□ -2.05
TUSC3-201ENST00000382020 AHNAKQ09666 5890 aaKnown RBP2.17□□□□□ -2.06
TUSC3-201ENST00000382020 PHGR1C9JFL3 82 aa1.95□□□□□ -2.1
TUSC3-201ENST00000382020 MUC16Q8WXI7 14507 aa1.31□□□□□ -2.2
Retrieved 77 of 20,778 RNA–protein pairs in 173.1 ms