RNA–Protein interactions for RNA: ENST00000381272.5

SMC6-202, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 5

Gene SMC6, Length 1,803 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-202ENST00000381272 PP632Q6XCG6 107 aa1.74□□□□□ -2.13
SMC6-202ENST00000381272 KRTAP4-1Q9BYQ7 146 aa1.74□□□□□ -2.13
SMC6-202ENST00000381272 HERC2O95714 4834 aa1.71□□□□□ -2.14
SMC6-202ENST00000381272 R4GN34 69 aa1.71□□□□□ -2.14
SMC6-202ENST00000381272 BIRC6Q9NR09 4857 aa1.69□□□□□ -2.14
SMC6-202ENST00000381272 KRTAP19-2Q3LHN2 52 aa1.68□□□□□ -2.14
SMC6-202ENST00000381272 HERC1Q15751 4861 aa1.67□□□□□ -2.14
SMC6-202ENST00000381272 MUC2Q02817 5179 aa1.66□□□□□ -2.14
SMC6-202ENST00000381272 FLGP20930 4061 aaPredicted RBP1.64□□□□□ -2.15
SMC6-202ENST00000381272 HMCN2Q8NDA2 5059 aa1.63□□□□□ -2.15
SMC6-202ENST00000381272 PCLOQ9Y6V0 5065 aa1.62□□□□□ -2.15
SMC6-202ENST00000381272 KRTAP10-10P60014 251 aa1.62□□□□□ -2.15
SMC6-202ENST00000381272 PLAC4Q8WY50 150 aa1.61□□□□□ -2.15
SMC6-202ENST00000381272 FAT4Q6V0I7 4981 aa1.59□□□□□ -2.16
SMC6-202ENST00000381272 SPRR5A0A1B0GTR4 108 aa1.58□□□□□ -2.16
SMC6-202ENST00000381272 RNF213Q63HN8 5207 aa1.57□□□□□ -2.16
SMC6-202ENST00000381272 TNP1P09430 55 aa1.56□□□□□ -2.16
SMC6-202ENST00000381272 M0R2T5 61 aa1.56□□□□□ -2.16
SMC6-202ENST00000381272 UBR4Q5T4S7 5183 aa1.55□□□□□ -2.16
SMC6-202ENST00000381272 MT1HP80294 61 aa1.54□□□□□ -2.16
SMC6-202ENST00000381272 SPRR2GQ9BYE4 73 aa1.54□□□□□ -2.16
SMC6-202ENST00000381272 MT2AP02795 61 aa1.52□□□□□ -2.17
SMC6-202ENST00000381272 MT1FP04733 61 aa1.52□□□□□ -2.17
SMC6-202ENST00000381272 KRTAP19-8Q3LI54 63 aa1.47□□□□□ -2.17
SMC6-202ENST00000381272 KRTAP5-7Q6L8G8 165 aa1.47□□□□□ -2.17
SMC6-202ENST00000381272 MT1BP07438 61 aa1.47□□□□□ -2.17
SMC6-202ENST00000381272 MT1XP80297 61 aa1.46□□□□□ -2.18
SMC6-202ENST00000381272 MUC19Q7Z5P9 8384 aa1.43□□□□□ -2.18
SMC6-202ENST00000381272 KRTAP8-1Q8IUC2 63 aa1.43□□□□□ -2.18
SMC6-202ENST00000381272 PRO2289Q9P1D8 64 aa1.42□□□□□ -2.18
SMC6-202ENST00000381272 KRTAP12-3P60328 96 aa1.41□□□□□ -2.18
SMC6-202ENST00000381272 KRTAP19-5Q3LI72 72 aa1.38□□□□□ -2.19
SMC6-202ENST00000381272 USH2AO75445 5202 aa1.37□□□□□ -2.19
SMC6-202ENST00000381272 KMT2DO14686 5537 aa1.37□□□□□ -2.19
SMC6-202ENST00000381272 AHNAKQ09666 5890 aaKnown RBP1.36□□□□□ -2.19
SMC6-202ENST00000381272 SSPOA2VEC9 5147 aa1.3□□□□□ -2.2
SMC6-202ENST00000381272 KRTAP19-7Q3SYF9 63 aa1.3□□□□□ -2.2
SMC6-202ENST00000381272 INE1O15225 51 aa1.29□□□□□ -2.2
SMC6-202ENST00000381272 KRTAP21-2Q3LI59 83 aa1.27□□□□□ -2.21
SMC6-202ENST00000381272 KRTAP12-4P60329 112 aa1.26□□□□□ -2.21
SMC6-202ENST00000381272 MT1LQ93083 61 aa1.26□□□□□ -2.21
SMC6-202ENST00000381272 MT1EP04732 61 aa1.26□□□□□ -2.21
SMC6-202ENST00000381272 KRTAP2-3P0C7H8 128 aa1.23□□□□□ -2.21
SMC6-202ENST00000381272 KRTAP6-3Q3LI67 103 aa1.23□□□□□ -2.21
SMC6-202ENST00000381272 KRTAP2-4Q9BYR9 128 aa1.23□□□□□ -2.21
SMC6-202ENST00000381272 KRTAP2-1Q9BYU5 128 aa1.23□□□□□ -2.21
SMC6-202ENST00000381272 KRTAP19-6Q3LI70 58 aa1.22□□□□□ -2.21
SMC6-202ENST00000381272 FCGBPQ9Y6R7 5405 aaPredicted RBP1.21□□□□□ -2.22
SMC6-202ENST00000381272 MUC12Q9UKN1 5478 aa1.21□□□□□ -2.22
SMC6-202ENST00000381272 FSIP2Q5CZC0 6907 aa1.2□□□□□ -2.22
SMC6-202ENST00000381272 MT1GP13640 62 aa1.2□□□□□ -2.22
SMC6-202ENST00000381272 MACF1Q9UPN3 7388 aaKnown RBP1.2□□□□□ -2.22
SMC6-202ENST00000381272 CRCT1Q9UGL9 99 aa1.19□□□□□ -2.22
SMC6-202ENST00000381272 MT1MQ8N339 61 aa1.18□□□□□ -2.22
SMC6-202ENST00000381272 KRTAP19-3Q7Z4W3 81 aa1.17□□□□□ -2.22
SMC6-202ENST00000381272 AHNAK2Q8IVF2 5795 aa1.17□□□□□ -2.22
SMC6-202ENST00000381272 SPRR2FQ96RM1 72 aa1.15□□□□□ -2.23
SMC6-202ENST00000381272 DSTQ03001 7570 aaKnown RBP1.1□□□□□ -2.23
SMC6-202ENST00000381272 KRTAP6-1Q3LI64 71 aa1.08□□□□□ -2.24
SMC6-202ENST00000381272 MDN1Q9NU22 5596 aa1.08□□□□□ -2.24
SMC6-202ENST00000381272 MT1AP04731 61 aa1.05□□□□□ -2.24
SMC6-202ENST00000381272 SPRR2EP22531 72 aa1.04□□□□□ -2.24
SMC6-202ENST00000381272 SPRR2BP35325 72 aa1.04□□□□□ -2.24
SMC6-202ENST00000381272 SPRR2AP35326 72 aa1.04□□□□□ -2.24
SMC6-202ENST00000381272 SYNE2Q8WXH0 6885 aaKnown RBP1.04□□□□□ -2.24
SMC6-202ENST00000381272 SYNE1Q8NF91 8797 aaKnown RBP1□□□□□ -2.25
SMC6-202ENST00000381272 SPRR2DP22532 72 aa0.99□□□□□ -2.25
SMC6-202ENST00000381272 PRM1P04553 51 aa0.99□□□□□ -2.25
SMC6-202ENST00000381272 MUC5ACP98088 5654 aa0.98□□□□□ -2.25
SMC6-202ENST00000381272 KRTAP6-2Q3LI66 62 aa0.97□□□□□ -2.25
SMC6-202ENST00000381272 NEBP20929 6669 aa0.92□□□□□ -2.26
SMC6-202ENST00000381272 MT4P47944 62 aa0.89□□□□□ -2.27
SMC6-202ENST00000381272 KRTAP20-2Q3LI61 65 aa0.85□□□□□ -2.27
SMC6-202ENST00000381272 KRTAP20-1Q3LI63 56 aa0.79□□□□□ -2.28
SMC6-202ENST00000381272 KRTAP5-10Q6L8G5 202 aa0.75□□□□□ -2.29
SMC6-202ENST00000381272 MUC16Q8WXI7 14507 aa0.61□□□□□ -2.31
SMC6-202ENST00000381272 KRTAP21-1Q3LI58 79 aa0.6□□□□□ -2.31
SMC6-202ENST00000381272 PHGR1C9JFL3 82 aa0.53□□□□□ -2.32
Retrieved 78 of 20,778 RNA–protein pairs in 248.7 ms