RNA–Protein interactions for RNA: ENST00000379540.7

NFX1-203, Transcript of nuclear transcription factor, X-box binding 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NFX1, Length 4,604 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFX1-203ENST00000379540 LCE2DQ5TA82 110 aaPredicted RBP2.46□□□□□ -2.02
NFX1-203ENST00000379540 MT3P25713 68 aa2.45□□□□□ -2.02
NFX1-203ENST00000379540 MT1EP04732 61 aa2.44□□□□□ -2.02
NFX1-203ENST00000379540 USH2AO75445 5202 aa2.43□□□□□ -2.02
NFX1-203ENST00000379540 KRTAP4-8A0A0G2JLE6 195 aa2.42□□□□□ -2.02
NFX1-203ENST00000379540 KRTAP4-8Q9BYQ9 185 aa2.42□□□□□ -2.02
NFX1-203ENST00000379540 KRTAP19-7Q3SYF9 63 aa2.39□□□□□ -2.03
NFX1-203ENST00000379540 MT1MQ8N339 61 aa2.37□□□□□ -2.03
NFX1-203ENST00000379540 SSPOA2VEC9 5147 aa2.36□□□□□ -2.03
NFX1-203ENST00000379540 KRTAP9-2Q9BYQ4 174 aa2.35□□□□□ -2.03
NFX1-203ENST00000379540 LCE1AQ5T7P2 110 aa2.33□□□□□ -2.04
NFX1-203ENST00000379540 KRTAP9-6A0A140TA67 174 aa2.32□□□□□ -2.04
NFX1-203ENST00000379540 MT1AP04731 61 aa2.29□□□□□ -2.04
NFX1-203ENST00000379540 KMT2DO14686 5537 aa2.26□□□□□ -2.05
NFX1-203ENST00000379540 KRTAP6-3Q3LI67 103 aa2.26□□□□□ -2.05
NFX1-203ENST00000379540 KRTAP4-7Q9BYR0 210 aa2.26□□□□□ -2.05
NFX1-203ENST00000379540 KRTAP9-6A8MVA2 160 aa2.24□□□□□ -2.05
NFX1-203ENST00000379540 KRTAP20-1Q3LI63 56 aa2.23□□□□□ -2.05
NFX1-203ENST00000379540 MT4P47944 62 aa2.23□□□□□ -2.05
NFX1-203ENST00000379540 PRM1P04553 51 aa2.21□□□□□ -2.06
NFX1-203ENST00000379540 KRTAP2-3P0C7H8 128 aa2.21□□□□□ -2.06
NFX1-203ENST00000379540 KRTAP2-4Q9BYR9 128 aa2.21□□□□□ -2.06
NFX1-203ENST00000379540 LCE4AQ5TA78 99 aa2.2□□□□□ -2.06
NFX1-203ENST00000379540 KRTAP2-1Q9BYU5 128 aa2.19□□□□□ -2.06
NFX1-203ENST00000379540 FCGBPQ9Y6R7 5405 aaPredicted RBP2.19□□□□□ -2.06
NFX1-203ENST00000379540 FSIP2Q5CZC0 6907 aa2.17□□□□□ -2.06
NFX1-203ENST00000379540 KRTAP9-7A8MTY7 169 aa2.16□□□□□ -2.06
NFX1-203ENST00000379540 LCE1DQ5T752 114 aa2.16□□□□□ -2.06
NFX1-203ENST00000379540 LCE5AQ5TCM9 118 aa2.16□□□□□ -2.06
NFX1-203ENST00000379540 OBSCNQ5VST9 7968 aa2.16□□□□□ -2.06
NFX1-203ENST00000379540 LCE1BQ5T7P3 118 aa2.16□□□□□ -2.06
NFX1-203ENST00000379540 KRTAP4-3Q9BYR4 195 aa2.14□□□□□ -2.07
NFX1-203ENST00000379540 KRTAP2-2Q9BYT5 123 aa2.13□□□□□ -2.07
NFX1-203ENST00000379540 LOC100996750A0A140TA64 210 aa2.1□□□□□ -2.07
NFX1-203ENST00000379540 KRTAP5-9P26371 169 aa2.1□□□□□ -2.07
NFX1-203ENST00000379540 MUC12Q9UKN1 5478 aa2.08□□□□□ -2.08
NFX1-203ENST00000379540 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.06□□□□□ -2.08
NFX1-203ENST00000379540 KRTAP9-4Q9BYQ2 154 aa2.06□□□□□ -2.08
NFX1-203ENST00000379540 MACF1Q9UPN3 7388 aaKnown RBP2.05□□□□□ -2.08
NFX1-203ENST00000379540 KRTAP4-9Q9BYQ8 210 aa2.02□□□□□ -2.09
NFX1-203ENST00000379540 SYNE2Q8WXH0 6885 aaKnown RBP1.98□□□□□ -2.09
NFX1-203ENST00000379540 KRTAP6-2Q3LI66 62 aa1.98□□□□□ -2.09
NFX1-203ENST00000379540 KRTAP6-1Q3LI64 71 aa1.97□□□□□ -2.09
NFX1-203ENST00000379540 KRTAP5-5Q701N2 237 aaPredicted RBP1.94□□□□□ -2.1
NFX1-203ENST00000379540 MUC19Q7Z5P9 8384 aa1.94□□□□□ -2.1
NFX1-203ENST00000379540 DSTQ03001 7570 aaKnown RBP1.91□□□□□ -2.1
NFX1-203ENST00000379540 MDN1Q9NU22 5596 aa1.9□□□□□ -2.11
NFX1-203ENST00000379540 LCE1CQ5T751 118 aa1.87□□□□□ -2.11
NFX1-203ENST00000379540 LCE1EQ5T753 118 aa1.87□□□□□ -2.11
NFX1-203ENST00000379540 LCE1FQ5T754 118 aa1.87□□□□□ -2.11
NFX1-203ENST00000379540 KRTAP9-9Q9BYP9 154 aa1.87□□□□□ -2.11
NFX1-203ENST00000379540 GPR98Q8WXG9 6306 aa1.83□□□□□ -2.12
NFX1-203ENST00000379540 NEBP20929 6669 aa1.78□□□□□ -2.12
NFX1-203ENST00000379540 KRTAP5-4Q6L8H1 288 aa1.78□□□□□ -2.12
NFX1-203ENST00000379540 KRTAP20-2Q3LI61 65 aa1.71□□□□□ -2.13
NFX1-203ENST00000379540 KRTAP4-6Q9BYQ5 205 aa1.67□□□□□ -2.14
NFX1-203ENST00000379540 KRTAP5-2Q701N4 177 aa1.65□□□□□ -2.15
NFX1-203ENST00000379540 KRTAP4-11Q9BYQ6 195 aa1.63□□□□□ -2.15
NFX1-203ENST00000379540 KRTAP5-3Q6L8H2 238 aa1.58□□□□□ -2.16
NFX1-203ENST00000379540 HMCN1Q96RW7 5635 aa1.56□□□□□ -2.16
NFX1-203ENST00000379540 AHNAK2Q8IVF2 5795 aa1.52□□□□□ -2.17
NFX1-203ENST00000379540 KRTAP4-12Q9BQ66 201 aa1.5□□□□□ -2.17
NFX1-203ENST00000379540 KRTAP4-4Q9BYR3 166 aa1.46□□□□□ -2.18
NFX1-203ENST00000379540 MUC5ACP98088 5654 aa1.42□□□□□ -2.18
NFX1-203ENST00000379540 KRTAP5-10Q6L8G5 202 aa1.41□□□□□ -2.18
NFX1-203ENST00000379540 KRTAP4-2Q9BYR5 136 aa1.39□□□□□ -2.19
NFX1-203ENST00000379540 KRTAP5-7Q6L8G8 165 aa1.38□□□□□ -2.19
NFX1-203ENST00000379540 KRTAP5-1Q6L8H4 278 aa1.38□□□□□ -2.19
NFX1-203ENST00000379540 AHNAKQ09666 5890 aaKnown RBP1.38□□□□□ -2.19
NFX1-203ENST00000379540 KRTAP5-8O75690 187 aa1.36□□□□□ -2.19
NFX1-203ENST00000379540 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.33□□□□□ -2.2
NFX1-203ENST00000379540 MUC5BQ9HC84 5762 aaPredicted RBP1.32□□□□□ -2.2
NFX1-203ENST00000379540 KRTAP21-2Q3LI59 83 aa1.26□□□□□ -2.21
NFX1-203ENST00000379540 KRTAP5-11Q6L8G4 156 aa1.24□□□□□ -2.21
NFX1-203ENST00000379540 PHGR1C9JFL3 82 aa1.16□□□□□ -2.22
NFX1-203ENST00000379540 KRTAP21-1Q3LI58 79 aa1.04□□□□□ -2.24
NFX1-203ENST00000379540 MUC16Q8WXI7 14507 aa0.72□□□□□ -2.29
Retrieved 77 of 20,778 RNA–protein pairs in 11 ms