RNA–Protein interactions for RNA: ENST00000378182.3

TRIM13-202, Transcript of tripartite motif containing 13, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRIM13, Length 7,249 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-202ENST00000378182 LRP2P98164 4655 aa4.17□□□□□ -1.74
TRIM13-202ENST00000378182 SYNE2Q8WXH0 6885 aaKnown RBP4.16□□□□□ -1.74
TRIM13-202ENST00000378182 LCE1CQ5T751 118 aa4.15□□□□□ -1.74
TRIM13-202ENST00000378182 LCE1EQ5T753 118 aa4.15□□□□□ -1.74
TRIM13-202ENST00000378182 LCE1FQ5T754 118 aa4.15□□□□□ -1.74
TRIM13-202ENST00000378182 LCE1AQ5T7P2 110 aa4.15□□□□□ -1.74
TRIM13-202ENST00000378182 KRTAP9-7A8MTY7 169 aa4.13□□□□□ -1.75
TRIM13-202ENST00000378182 HYDINQ4G0P3 5121 aa4.09□□□□□ -1.76
TRIM13-202ENST00000378182 RYR2Q92736 4967 aa4.07□□□□□ -1.76
TRIM13-202ENST00000378182 KRTAP19-2Q3LHN2 52 aa4□□□□□ -1.77
TRIM13-202ENST00000378182 HERC2O95714 4834 aa3.97□□□□□ -1.77
TRIM13-202ENST00000378182 BIRC6Q9NR09 4857 aa3.95□□□□□ -1.78
TRIM13-202ENST00000378182 KRTAP2-3P0C7H8 128 aa3.95□□□□□ -1.78
TRIM13-202ENST00000378182 KRTAP2-4Q9BYR9 128 aa3.95□□□□□ -1.78
TRIM13-202ENST00000378182 KRTAP2-1Q9BYU5 128 aa3.94□□□□□ -1.78
TRIM13-202ENST00000378182 KRTAP6-2Q3LI66 62 aa3.93□□□□□ -1.78
TRIM13-202ENST00000378182 MT1AP04731 61 aa3.92□□□□□ -1.78
TRIM13-202ENST00000378182 SYNE1Q8NF91 8797 aaKnown RBP3.92□□□□□ -1.78
TRIM13-202ENST00000378182 KMT2CQ8NEZ4 4911 aaKnown RBP3.87□□□□□ -1.79
TRIM13-202ENST00000378182 PCLOQ9Y6V0 5065 aa3.86□□□□□ -1.79
TRIM13-202ENST00000378182 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.84□□□□□ -1.8
TRIM13-202ENST00000378182 KRTAP6-1Q3LI64 71 aa3.81□□□□□ -1.8
TRIM13-202ENST00000378182 KRTAP19-7Q3SYF9 63 aa3.8□□□□□ -1.8
TRIM13-202ENST00000378182 KRTAP6-3Q3LI67 103 aa3.8□□□□□ -1.8
TRIM13-202ENST00000378182 HERC1Q15751 4861 aa3.78□□□□□ -1.8
TRIM13-202ENST00000378182 LCE2AQ5TA79 106 aaPredicted RBP3.78□□□□□ -1.8
TRIM13-202ENST00000378182 KRTAP2-2Q9BYT5 123 aa3.77□□□□□ -1.81
TRIM13-202ENST00000378182 LCE4AQ5TA78 99 aa3.77□□□□□ -1.81
TRIM13-202ENST00000378182 KRTAP9-4Q9BYQ2 154 aa3.74□□□□□ -1.81
TRIM13-202ENST00000378182 EPPK1P58107 5090 aaKnown RBP3.67□□□□□ -1.82
TRIM13-202ENST00000378182 KRTAP9-9Q9BYP9 154 aa3.65□□□□□ -1.83
TRIM13-202ENST00000378182 FSIP2Q5CZC0 6907 aa3.64□□□□□ -1.83
TRIM13-202ENST00000378182 HMCN2Q8NDA2 5059 aa3.6□□□□□ -1.83
TRIM13-202ENST00000378182 UBR4Q5T4S7 5183 aa3.53□□□□□ -1.84
TRIM13-202ENST00000378182 ABCA13Q86UQ4 5058 aa3.48□□□□□ -1.85
TRIM13-202ENST00000378182 OBSCNQ5VST9 7968 aa3.45□□□□□ -1.86
TRIM13-202ENST00000378182 KRTAP9-6A8MVA2 160 aa3.45□□□□□ -1.86
TRIM13-202ENST00000378182 FAT4Q6V0I7 4981 aa3.43□□□□□ -1.86
TRIM13-202ENST00000378182 RNF213Q63HN8 5207 aa3.41□□□□□ -1.86
TRIM13-202ENST00000378182 KRTAP20-2Q3LI61 65 aa3.4□□□□□ -1.87
TRIM13-202ENST00000378182 MUC2Q02817 5179 aa3.38□□□□□ -1.87
TRIM13-202ENST00000378182 KRTAP4-11Q9BYQ6 195 aa3.32□□□□□ -1.88
TRIM13-202ENST00000378182 KRTAP4-6Q9BYQ5 205 aa3.31□□□□□ -1.88
TRIM13-202ENST00000378182 KRTAP4-4Q9BYR3 166 aa3.27□□□□□ -1.89
TRIM13-202ENST00000378182 KRTAP4-12Q9BQ66 201 aa3.25□□□□□ -1.89
TRIM13-202ENST00000378182 KRTAP4-2Q9BYR5 136 aa3.25□□□□□ -1.89
TRIM13-202ENST00000378182 FCGBPQ9Y6R7 5405 aaPredicted RBP3.15□□□□□ -1.91
TRIM13-202ENST00000378182 DSTQ03001 7570 aaKnown RBP3.09□□□□□ -1.92
TRIM13-202ENST00000378182 KMT2DO14686 5537 aa3.04□□□□□ -1.92
TRIM13-202ENST00000378182 USH2AO75445 5202 aa2.99□□□□□ -1.93
TRIM13-202ENST00000378182 MACF1Q9UPN3 7388 aaKnown RBP2.9□□□□□ -1.95
TRIM13-202ENST00000378182 NEBP20929 6669 aa2.89□□□□□ -1.95
TRIM13-202ENST00000378182 KRTAP5-9P26371 169 aa2.89□□□□□ -1.95
TRIM13-202ENST00000378182 MUC19Q7Z5P9 8384 aa2.82□□□□□ -1.96
TRIM13-202ENST00000378182 KRTAP5-4Q6L8H1 288 aa2.79□□□□□ -1.96
TRIM13-202ENST00000378182 MUC12Q9UKN1 5478 aa2.69□□□□□ -1.98
TRIM13-202ENST00000378182 SSPOA2VEC9 5147 aa2.66□□□□□ -1.98
TRIM13-202ENST00000378182 KRTAP5-5Q701N2 237 aaPredicted RBP2.61□□□□□ -1.99
TRIM13-202ENST00000378182 MDN1Q9NU22 5596 aa2.58□□□□□ -2
TRIM13-202ENST00000378182 PHGR1C9JFL3 82 aa2.48□□□□□ -2.01
TRIM13-202ENST00000378182 KRTAP5-3Q6L8H2 238 aa2.47□□□□□ -2.01
TRIM13-202ENST00000378182 GPR98Q8WXG9 6306 aa2.44□□□□□ -2.02
TRIM13-202ENST00000378182 KRTAP5-8O75690 187 aa2.33□□□□□ -2.04
TRIM13-202ENST00000378182 MUC5ACP98088 5654 aa2.25□□□□□ -2.05
TRIM13-202ENST00000378182 HMCN1Q96RW7 5635 aa2.11□□□□□ -2.07
TRIM13-202ENST00000378182 KRTAP5-10Q6L8G5 202 aa2.04□□□□□ -2.08
TRIM13-202ENST00000378182 KRTAP5-2Q701N4 177 aa2□□□□□ -2.09
TRIM13-202ENST00000378182 MUC5BQ9HC84 5762 aaPredicted RBP1.96□□□□□ -2.1
TRIM13-202ENST00000378182 AHNAK2Q8IVF2 5795 aa1.95□□□□□ -2.1
TRIM13-202ENST00000378182 KRTAP5-1Q6L8H4 278 aa1.89□□□□□ -2.11
TRIM13-202ENST00000378182 KRTAP5-11Q6L8G4 156 aa1.79□□□□□ -2.12
TRIM13-202ENST00000378182 KRTAP5-7Q6L8G8 165 aa1.72□□□□□ -2.13
TRIM13-202ENST00000378182 KRTAP21-2Q3LI59 83 aa1.7□□□□□ -2.14
TRIM13-202ENST00000378182 AHNAKQ09666 5890 aaKnown RBP1.7□□□□□ -2.14
TRIM13-202ENST00000378182 KRTAP21-1Q3LI58 79 aa1.6□□□□□ -2.15
TRIM13-202ENST00000378182 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.59□□□□□ -2.15
TRIM13-202ENST00000378182 MUC16Q8WXI7 14507 aa1.41□□□□□ -2.18
Retrieved 77 of 20,778 RNA–protein pairs in 135.8 ms