RNA–Protein interactions for RNA: ENST00000377199.3

TRIM27-202, Transcript of tripartite motif containing 27, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM27, Length 2,967 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM27-202ENST00000377199 LOC100996750A0A140TA64 210 aa5.46□□□□□ -1.54
TRIM27-202ENST00000377199 CRCT1Q9UGL9 99 aa5.45□□□□□ -1.54
TRIM27-202ENST00000377199 KRTAP2-3P0C7H8 128 aa5.41□□□□□ -1.54
TRIM27-202ENST00000377199 KRTAP2-4Q9BYR9 128 aa5.41□□□□□ -1.54
TRIM27-202ENST00000377199 KRTAP2-1Q9BYU5 128 aa5.41□□□□□ -1.54
TRIM27-202ENST00000377199 MT1GP13640 62 aa5.38□□□□□ -1.55
TRIM27-202ENST00000377199 LCE2DQ5TA82 110 aaPredicted RBP5.36□□□□□ -1.55
TRIM27-202ENST00000377199 MACF1Q9UPN3 7388 aaKnown RBP5.28□□□□□ -1.56
TRIM27-202ENST00000377199 KRTAP19-4Q3LI73 84 aa5.27□□□□□ -1.57
TRIM27-202ENST00000377199 KRTAP19-3Q7Z4W3 81 aa5.25□□□□□ -1.57
TRIM27-202ENST00000377199 MT1MQ8N339 61 aa5.25□□□□□ -1.57
TRIM27-202ENST00000377199 SPRR2FQ96RM1 72 aa5.22□□□□□ -1.57
TRIM27-202ENST00000377199 SYNE2Q8WXH0 6885 aaKnown RBP5.19□□□□□ -1.58
TRIM27-202ENST00000377199 MDN1Q9NU22 5596 aa5.16□□□□□ -1.58
TRIM27-202ENST00000377199 SYNE1Q8NF91 8797 aaKnown RBP5.15□□□□□ -1.58
TRIM27-202ENST00000377199 KRTAP9-2Q9BYQ4 174 aa5.12□□□□□ -1.59
TRIM27-202ENST00000377199 LCE5AQ5TCM9 118 aa5.04□□□□□ -1.6
TRIM27-202ENST00000377199 LCE3BQ5TA77 95 aa5.01□□□□□ -1.61
TRIM27-202ENST00000377199 KRTAP12-4P60329 112 aa4.95□□□□□ -1.62
TRIM27-202ENST00000377199 KRTAP4-9Q9BYQ8 210 aa4.94□□□□□ -1.62
TRIM27-202ENST00000377199 OBSCNQ5VST9 7968 aa4.9□□□□□ -1.62
TRIM27-202ENST00000377199 KRTAP6-1Q3LI64 71 aa4.83□□□□□ -1.64
TRIM27-202ENST00000377199 LCE1AQ5T7P2 110 aa4.74□□□□□ -1.65
TRIM27-202ENST00000377199 SPRR2EP22531 72 aa4.72□□□□□ -1.65
TRIM27-202ENST00000377199 SPRR2BP35325 72 aa4.72□□□□□ -1.65
TRIM27-202ENST00000377199 SPRR2AP35326 72 aa4.72□□□□□ -1.65
TRIM27-202ENST00000377199 KRTAP9-6A0A140TA67 174 aa4.69□□□□□ -1.66
TRIM27-202ENST00000377199 MT1AP04731 61 aa4.66□□□□□ -1.66
TRIM27-202ENST00000377199 KRTAP5-9P26371 169 aa4.6□□□□□ -1.67
TRIM27-202ENST00000377199 LCE3DQ9BYE3 92 aa4.6□□□□□ -1.67
TRIM27-202ENST00000377199 KRTAP5-5Q701N2 237 aaPredicted RBP4.54□□□□□ -1.68
TRIM27-202ENST00000377199 LCE3EQ5T5B0 92 aa4.51□□□□□ -1.69
TRIM27-202ENST00000377199 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.5□□□□□ -1.69
TRIM27-202ENST00000377199 SPRR2DP22532 72 aa4.49□□□□□ -1.69
TRIM27-202ENST00000377199 KRTAP9-7A8MTY7 169 aa4.48□□□□□ -1.69
TRIM27-202ENST00000377199 KRTAP9-4Q9BYQ2 154 aa4.4□□□□□ -1.71
TRIM27-202ENST00000377199 PRM1P04553 51 aa4.39□□□□□ -1.71
TRIM27-202ENST00000377199 KRTAP6-2Q3LI66 62 aa4.35□□□□□ -1.71
TRIM27-202ENST00000377199 MT3P25713 68 aa4.22□□□□□ -1.73
TRIM27-202ENST00000377199 KRTAP6-3Q3LI67 103 aa4.22□□□□□ -1.73
TRIM27-202ENST00000377199 NEBP20929 6669 aa4.16□□□□□ -1.74
TRIM27-202ENST00000377199 MT4P47944 62 aa4.08□□□□□ -1.76
TRIM27-202ENST00000377199 KRTAP4-6Q9BYQ5 205 aa4.05□□□□□ -1.76
TRIM27-202ENST00000377199 KRTAP5-4Q6L8H1 288 aa3.96□□□□□ -1.78
TRIM27-202ENST00000377199 HMCN1Q96RW7 5635 aa3.91□□□□□ -1.78
TRIM27-202ENST00000377199 KRTAP2-2Q9BYT5 123 aa3.89□□□□□ -1.79
TRIM27-202ENST00000377199 LCE1EQ5T753 118 aa3.87□□□□□ -1.79
TRIM27-202ENST00000377199 KRTAP20-2Q3LI61 65 aa3.84□□□□□ -1.8
TRIM27-202ENST00000377199 KRTAP20-1Q3LI63 56 aa3.75□□□□□ -1.81
TRIM27-202ENST00000377199 LCE1DQ5T752 114 aa3.73□□□□□ -1.81
TRIM27-202ENST00000377199 LCE4AQ5TA78 99 aa3.72□□□□□ -1.81
TRIM27-202ENST00000377199 MUC5ACP98088 5654 aa3.7□□□□□ -1.82
TRIM27-202ENST00000377199 KRTAP5-2Q701N4 177 aa3.69□□□□□ -1.82
TRIM27-202ENST00000377199 LCE1BQ5T7P3 118 aa3.6□□□□□ -1.83
TRIM27-202ENST00000377199 KRTAP5-3Q6L8H2 238 aa3.58□□□□□ -1.84
TRIM27-202ENST00000377199 KRTAP4-11Q9BYQ6 195 aa3.37□□□□□ -1.87
TRIM27-202ENST00000377199 KRTAP5-10Q6L8G5 202 aa3.31□□□□□ -1.88
TRIM27-202ENST00000377199 LCE1FQ5T754 118 aa3.31□□□□□ -1.88
TRIM27-202ENST00000377199 KRTAP4-2Q9BYR5 136 aa3.26□□□□□ -1.89
TRIM27-202ENST00000377199 MUC19Q7Z5P9 8384 aa3.21□□□□□ -1.9
TRIM27-202ENST00000377199 KRTAP5-1Q6L8H4 278 aa3.21□□□□□ -1.9
TRIM27-202ENST00000377199 LCE1CQ5T751 118 aa3.18□□□□□ -1.9
TRIM27-202ENST00000377199 AHNAK2Q8IVF2 5795 aa3.14□□□□□ -1.91
TRIM27-202ENST00000377199 GPR98Q8WXG9 6306 aa3.08□□□□□ -1.92
TRIM27-202ENST00000377199 KRTAP21-2Q3LI59 83 aa3.05□□□□□ -1.92
TRIM27-202ENST00000377199 MUC5BQ9HC84 5762 aaPredicted RBP3.03□□□□□ -1.92
TRIM27-202ENST00000377199 KRTAP4-4Q9BYR3 166 aa3.02□□□□□ -1.93
TRIM27-202ENST00000377199 KRTAP5-8O75690 187 aa3□□□□□ -1.93
TRIM27-202ENST00000377199 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.92□□□□□ -1.94
TRIM27-202ENST00000377199 KRTAP4-12Q9BQ66 201 aa2.85□□□□□ -1.95
TRIM27-202ENST00000377199 KRTAP5-7Q6L8G8 165 aa2.8□□□□□ -1.96
TRIM27-202ENST00000377199 KRTAP5-11Q6L8G4 156 aa2.72□□□□□ -1.97
TRIM27-202ENST00000377199 KRTAP21-1Q3LI58 79 aa2.61□□□□□ -1.99
TRIM27-202ENST00000377199 KRTAP9-9Q9BYP9 154 aa2.58□□□□□ -2
TRIM27-202ENST00000377199 AHNAKQ09666 5890 aaKnown RBP2.43□□□□□ -2.02
TRIM27-202ENST00000377199 PHGR1C9JFL3 82 aa2.38□□□□□ -2.03
TRIM27-202ENST00000377199 MUC16Q8WXI7 14507 aa1.59□□□□□ -2.15
Retrieved 77 of 20,778 RNA–protein pairs in 70.8 ms