RNA–Protein interactions for RNA: ENST00000377038.7

DFFA-202, Transcript of DNA fragmentation factor subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DFFA, Length 6,032 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DFFA-202ENST00000377038 KRTAP4-7Q9BYR0 210 aa4.44□□□□□ -1.7
DFFA-202ENST00000377038 FSIP2Q5CZC0 6907 aa4.43□□□□□ -1.7
DFFA-202ENST00000377038 SPRR5A0A1B0GTR4 108 aa4.38□□□□□ -1.71
DFFA-202ENST00000377038 KRTAP9-6A0A140TA67 174 aa4.32□□□□□ -1.72
DFFA-202ENST00000377038 MT1MQ8N339 61 aa4.31□□□□□ -1.72
DFFA-202ENST00000377038 MUC2Q02817 5179 aa4.27□□□□□ -1.73
DFFA-202ENST00000377038 KRTAP4-3Q9BYR4 195 aa4.22□□□□□ -1.73
DFFA-202ENST00000377038 KRTAP19-7Q3SYF9 63 aa4.2□□□□□ -1.74
DFFA-202ENST00000377038 LCE3DQ9BYE3 92 aa4.2□□□□□ -1.74
DFFA-202ENST00000377038 LOC100996750A0A140TA64 210 aa4.19□□□□□ -1.74
DFFA-202ENST00000377038 MT4P47944 62 aa4.17□□□□□ -1.74
DFFA-202ENST00000377038 LCE3EQ5T5B0 92 aa4.1□□□□□ -1.75
DFFA-202ENST00000377038 KRTAP9-7A8MTY7 169 aa4.05□□□□□ -1.76
DFFA-202ENST00000377038 MT3P25713 68 aa4.04□□□□□ -1.76
DFFA-202ENST00000377038 KRTAP6-3Q3LI67 103 aa4.01□□□□□ -1.77
DFFA-202ENST00000377038 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.99□□□□□ -1.77
DFFA-202ENST00000377038 SYNE2Q8WXH0 6885 aaKnown RBP3.96□□□□□ -1.78
DFFA-202ENST00000377038 KRTAP20-1Q3LI63 56 aa3.95□□□□□ -1.78
DFFA-202ENST00000377038 MT1AP04731 61 aa3.93□□□□□ -1.78
DFFA-202ENST00000377038 LCE1AQ5T7P2 110 aa3.92□□□□□ -1.78
DFFA-202ENST00000377038 LCE5AQ5TCM9 118 aa3.87□□□□□ -1.79
DFFA-202ENST00000377038 USH2AO75445 5202 aa3.85□□□□□ -1.79
DFFA-202ENST00000377038 SYNE1Q8NF91 8797 aaKnown RBP3.84□□□□□ -1.79
DFFA-202ENST00000377038 LCE1DQ5T752 114 aa3.83□□□□□ -1.8
DFFA-202ENST00000377038 KRTAP2-3P0C7H8 128 aa3.82□□□□□ -1.8
DFFA-202ENST00000377038 KRTAP2-4Q9BYR9 128 aa3.82□□□□□ -1.8
DFFA-202ENST00000377038 KRTAP2-1Q9BYU5 128 aa3.82□□□□□ -1.8
DFFA-202ENST00000377038 LCE1BQ5T7P3 118 aa3.8□□□□□ -1.8
DFFA-202ENST00000377038 KRTAP4-9Q9BYQ8 210 aa3.79□□□□□ -1.8
DFFA-202ENST00000377038 KRTAP9-6A8MVA2 160 aa3.77□□□□□ -1.81
DFFA-202ENST00000377038 KRTAP6-1Q3LI64 71 aa3.76□□□□□ -1.81
DFFA-202ENST00000377038 PRM1P04553 51 aa3.72□□□□□ -1.81
DFFA-202ENST00000377038 KRTAP2-2Q9BYT5 123 aa3.71□□□□□ -1.82
DFFA-202ENST00000377038 LCE4AQ5TA78 99 aa3.69□□□□□ -1.82
DFFA-202ENST00000377038 KRTAP6-2Q3LI66 62 aa3.68□□□□□ -1.82
DFFA-202ENST00000377038 KRTAP9-4Q9BYQ2 154 aa3.66□□□□□ -1.82
DFFA-202ENST00000377038 KMT2DO14686 5537 aa3.65□□□□□ -1.83
DFFA-202ENST00000377038 MACF1Q9UPN3 7388 aaKnown RBP3.64□□□□□ -1.83
DFFA-202ENST00000377038 OBSCNQ5VST9 7968 aa3.58□□□□□ -1.84
DFFA-202ENST00000377038 FCGBPQ9Y6R7 5405 aaPredicted RBP3.56□□□□□ -1.84
DFFA-202ENST00000377038 KRTAP5-9P26371 169 aa3.54□□□□□ -1.84
DFFA-202ENST00000377038 SSPOA2VEC9 5147 aa3.52□□□□□ -1.85
DFFA-202ENST00000377038 DSTQ03001 7570 aaKnown RBP3.47□□□□□ -1.85
DFFA-202ENST00000377038 NEBP20929 6669 aa3.42□□□□□ -1.86
DFFA-202ENST00000377038 MUC12Q9UKN1 5478 aa3.39□□□□□ -1.87
DFFA-202ENST00000377038 KRTAP4-6Q9BYQ5 205 aa3.28□□□□□ -1.88
DFFA-202ENST00000377038 KRTAP20-2Q3LI61 65 aa3.2□□□□□ -1.9
DFFA-202ENST00000377038 LCE1CQ5T751 118 aa3.17□□□□□ -1.9
DFFA-202ENST00000377038 LCE1EQ5T753 118 aa3.17□□□□□ -1.9
DFFA-202ENST00000377038 LCE1FQ5T754 118 aa3.17□□□□□ -1.9
DFFA-202ENST00000377038 KRTAP9-9Q9BYP9 154 aa3.13□□□□□ -1.91
DFFA-202ENST00000377038 MDN1Q9NU22 5596 aa3.12□□□□□ -1.91
DFFA-202ENST00000377038 KRTAP5-4Q6L8H1 288 aa3.01□□□□□ -1.93
DFFA-202ENST00000377038 KRTAP5-5Q701N2 237 aaPredicted RBP2.95□□□□□ -1.94
DFFA-202ENST00000377038 GPR98Q8WXG9 6306 aa2.92□□□□□ -1.94
DFFA-202ENST00000377038 KRTAP4-11Q9BYQ6 195 aa2.86□□□□□ -1.95
DFFA-202ENST00000377038 KRTAP4-12Q9BQ66 201 aa2.75□□□□□ -1.97
DFFA-202ENST00000377038 KRTAP4-2Q9BYR5 136 aa2.75□□□□□ -1.97
DFFA-202ENST00000377038 KRTAP4-4Q9BYR3 166 aa2.71□□□□□ -1.98
DFFA-202ENST00000377038 KRTAP5-3Q6L8H2 238 aa2.67□□□□□ -1.98
DFFA-202ENST00000377038 MUC19Q7Z5P9 8384 aa2.67□□□□□ -1.98
DFFA-202ENST00000377038 MUC5ACP98088 5654 aa2.59□□□□□ -2
DFFA-202ENST00000377038 HMCN1Q96RW7 5635 aa2.52□□□□□ -2.01
DFFA-202ENST00000377038 KRTAP5-8O75690 187 aa2.46□□□□□ -2.02
DFFA-202ENST00000377038 KRTAP5-2Q701N4 177 aa2.46□□□□□ -2.02
DFFA-202ENST00000377038 AHNAK2Q8IVF2 5795 aa2.4□□□□□ -2.03
DFFA-202ENST00000377038 KRTAP5-10Q6L8G5 202 aa2.23□□□□□ -2.05
DFFA-202ENST00000377038 KRTAP5-1Q6L8H4 278 aa2.18□□□□□ -2.06
DFFA-202ENST00000377038 MUC5BQ9HC84 5762 aaPredicted RBP2.13□□□□□ -2.07
DFFA-202ENST00000377038 AHNAKQ09666 5890 aaKnown RBP2.11□□□□□ -2.07
DFFA-202ENST00000377038 KRTAP5-11Q6L8G4 156 aa2.1□□□□□ -2.07
DFFA-202ENST00000377038 PHGR1C9JFL3 82 aa2.06□□□□□ -2.08
DFFA-202ENST00000377038 KRTAP21-2Q3LI59 83 aa2.01□□□□□ -2.09
DFFA-202ENST00000377038 KRTAP5-7Q6L8G8 165 aa1.97□□□□□ -2.09
DFFA-202ENST00000377038 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.9□□□□□ -2.1
DFFA-202ENST00000377038 KRTAP21-1Q3LI58 79 aa1.61□□□□□ -2.15
DFFA-202ENST00000377038 MUC16Q8WXI7 14507 aa1.23□□□□□ -2.21
Retrieved 77 of 20,778 RNA–protein pairs in 82.7 ms