RNA–Protein interactions for RNA: ENST00000377012.8

GABBR1-203, Transcript of gamma-aminobutyric acid type B receptor subunit 1, humanhuman

TSL 1 (best) BASIC

Gene GABBR1, Length 4,104 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABBR1-203ENST00000377012 FCGBPQ9Y6R7 5405 aaPredicted RBP4.13□□□□□ -1.75
GABBR1-203ENST00000377012 KRTAP19-7Q3SYF9 63 aa4.13□□□□□ -1.75
GABBR1-203ENST00000377012 MT1EP04732 61 aa4.12□□□□□ -1.75
GABBR1-203ENST00000377012 KRTAP4-3Q9BYR4 195 aa4.1□□□□□ -1.75
GABBR1-203ENST00000377012 KRTAP9-6A8MVA2 160 aa4.08□□□□□ -1.76
GABBR1-203ENST00000377012 LOC100996750A0A140TA64 210 aa4.08□□□□□ -1.76
GABBR1-203ENST00000377012 SYNE2Q8WXH0 6885 aaKnown RBP4.03□□□□□ -1.76
GABBR1-203ENST00000377012 KRTAP19-4Q3LI73 84 aa4.03□□□□□ -1.76
GABBR1-203ENST00000377012 LCE3BQ5TA77 95 aa4.03□□□□□ -1.76
GABBR1-203ENST00000377012 KRTAP2-3P0C7H8 128 aa3.99□□□□□ -1.77
GABBR1-203ENST00000377012 KRTAP9-2Q9BYQ4 174 aa3.99□□□□□ -1.77
GABBR1-203ENST00000377012 KRTAP2-4Q9BYR9 128 aa3.99□□□□□ -1.77
GABBR1-203ENST00000377012 KRTAP2-1Q9BYU5 128 aa3.99□□□□□ -1.77
GABBR1-203ENST00000377012 SPRR2DP22532 72 aa3.97□□□□□ -1.77
GABBR1-203ENST00000377012 MUC12Q9UKN1 5478 aa3.96□□□□□ -1.77
GABBR1-203ENST00000377012 KRTAP12-4P60329 112 aa3.96□□□□□ -1.78
GABBR1-203ENST00000377012 MACF1Q9UPN3 7388 aaKnown RBP3.96□□□□□ -1.78
GABBR1-203ENST00000377012 KRTAP19-3Q7Z4W3 81 aa3.96□□□□□ -1.78
GABBR1-203ENST00000377012 KRTAP19-6Q3LI70 58 aa3.93□□□□□ -1.78
GABBR1-203ENST00000377012 SSPOA2VEC9 5147 aa3.91□□□□□ -1.78
GABBR1-203ENST00000377012 MT1MQ8N339 61 aa3.91□□□□□ -1.78
GABBR1-203ENST00000377012 KRTAP4-9Q9BYQ8 210 aa3.78□□□□□ -1.8
GABBR1-203ENST00000377012 LCE2DQ5TA82 110 aaPredicted RBP3.76□□□□□ -1.81
GABBR1-203ENST00000377012 KRTAP9-6A0A140TA67 174 aa3.71□□□□□ -1.82
GABBR1-203ENST00000377012 MT4P47944 62 aa3.7□□□□□ -1.82
GABBR1-203ENST00000377012 LCE3DQ9BYE3 92 aa3.69□□□□□ -1.82
GABBR1-203ENST00000377012 LCE3EQ5T5B0 92 aa3.62□□□□□ -1.83
GABBR1-203ENST00000377012 LCE5AQ5TCM9 118 aa3.59□□□□□ -1.83
GABBR1-203ENST00000377012 KRTAP6-1Q3LI64 71 aa3.56□□□□□ -1.84
GABBR1-203ENST00000377012 MDN1Q9NU22 5596 aa3.55□□□□□ -1.84
GABBR1-203ENST00000377012 KRTAP9-7A8MTY7 169 aa3.54□□□□□ -1.84
GABBR1-203ENST00000377012 MT1AP04731 61 aa3.5□□□□□ -1.85
GABBR1-203ENST00000377012 PRM1P04553 51 aa3.49□□□□□ -1.85
GABBR1-203ENST00000377012 LCE1AQ5T7P2 110 aa3.45□□□□□ -1.86
GABBR1-203ENST00000377012 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.44□□□□□ -1.86
GABBR1-203ENST00000377012 MT3P25713 68 aa3.41□□□□□ -1.86
GABBR1-203ENST00000377012 LCE1DQ5T752 114 aa3.41□□□□□ -1.86
GABBR1-203ENST00000377012 LCE1BQ5T7P3 118 aa3.41□□□□□ -1.86
GABBR1-203ENST00000377012 MUC19Q7Z5P9 8384 aa3.39□□□□□ -1.87
GABBR1-203ENST00000377012 KRTAP6-2Q3LI66 62 aa3.32□□□□□ -1.88
GABBR1-203ENST00000377012 KRTAP6-3Q3LI67 103 aa3.3□□□□□ -1.88
GABBR1-203ENST00000377012 KRTAP20-1Q3LI63 56 aa3.29□□□□□ -1.88
GABBR1-203ENST00000377012 KRTAP9-4Q9BYQ2 154 aa3.25□□□□□ -1.89
GABBR1-203ENST00000377012 KRTAP2-2Q9BYT5 123 aa3.24□□□□□ -1.89
GABBR1-203ENST00000377012 KRTAP5-5Q701N2 237 aaPredicted RBP3.16□□□□□ -1.9
GABBR1-203ENST00000377012 NEBP20929 6669 aa3.15□□□□□ -1.9
GABBR1-203ENST00000377012 KRTAP5-9P26371 169 aa3.15□□□□□ -1.91
GABBR1-203ENST00000377012 GPR98Q8WXG9 6306 aa3.13□□□□□ -1.91
GABBR1-203ENST00000377012 LCE1EQ5T753 118 aa3.11□□□□□ -1.91
GABBR1-203ENST00000377012 KRTAP4-6Q9BYQ5 205 aa3□□□□□ -1.93
GABBR1-203ENST00000377012 LCE4AQ5TA78 99 aa2.97□□□□□ -1.93
GABBR1-203ENST00000377012 MUC5ACP98088 5654 aa2.83□□□□□ -1.96
GABBR1-203ENST00000377012 KRTAP20-2Q3LI61 65 aa2.8□□□□□ -1.96
GABBR1-203ENST00000377012 LCE1CQ5T751 118 aa2.8□□□□□ -1.96
GABBR1-203ENST00000377012 LCE1FQ5T754 118 aa2.8□□□□□ -1.96
GABBR1-203ENST00000377012 HMCN1Q96RW7 5635 aa2.75□□□□□ -1.97
GABBR1-203ENST00000377012 KRTAP4-11Q9BYQ6 195 aa2.69□□□□□ -1.98
GABBR1-203ENST00000377012 KRTAP5-4Q6L8H1 288 aa2.62□□□□□ -1.99
GABBR1-203ENST00000377012 KRTAP9-9Q9BYP9 154 aa2.62□□□□□ -1.99
GABBR1-203ENST00000377012 KRTAP4-12Q9BQ66 201 aa2.56□□□□□ -2
GABBR1-203ENST00000377012 KRTAP4-2Q9BYR5 136 aa2.56□□□□□ -2
GABBR1-203ENST00000377012 KRTAP4-4Q9BYR3 166 aa2.54□□□□□ -2
GABBR1-203ENST00000377012 AHNAK2Q8IVF2 5795 aa2.5□□□□□ -2.01
GABBR1-203ENST00000377012 KRTAP5-2Q701N4 177 aa2.41□□□□□ -2.02
GABBR1-203ENST00000377012 KRTAP5-3Q6L8H2 238 aa2.37□□□□□ -2.03
GABBR1-203ENST00000377012 KRTAP5-10Q6L8G5 202 aa2.34□□□□□ -2.03
GABBR1-203ENST00000377012 KRTAP5-1Q6L8H4 278 aa2.21□□□□□ -2.06
GABBR1-203ENST00000377012 KRTAP5-8O75690 187 aa2.19□□□□□ -2.06
GABBR1-203ENST00000377012 MUC5BQ9HC84 5762 aaPredicted RBP2.16□□□□□ -2.06
GABBR1-203ENST00000377012 AHNAKQ09666 5890 aaKnown RBP2.11□□□□□ -2.07
GABBR1-203ENST00000377012 KRTAP21-2Q3LI59 83 aa2.07□□□□□ -2.08
GABBR1-203ENST00000377012 KRTAP21-1Q3LI58 79 aa2□□□□□ -2.09
GABBR1-203ENST00000377012 KRTAP5-6Q6L8G9 129 aaPredicted RBP2□□□□□ -2.09
GABBR1-203ENST00000377012 KRTAP5-11Q6L8G4 156 aa1.89□□□□□ -2.11
GABBR1-203ENST00000377012 PHGR1C9JFL3 82 aa1.8□□□□□ -2.12
GABBR1-203ENST00000377012 KRTAP5-7Q6L8G8 165 aa1.78□□□□□ -2.12
GABBR1-203ENST00000377012 MUC16Q8WXI7 14507 aa1.12□□□□□ -2.23
Retrieved 77 of 20,778 RNA–protein pairs in 8.7 ms