RNA–Protein interactions for RNA: ENST00000376567.6

DDR1-224, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DDR1, Length 3,832 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-224ENST00000376567 SYNE2Q8WXH0 6885 aaKnown RBP4.23□□□□□ -1.73
DDR1-224ENST00000376567 LOC100996750A0A140TA64 210 aa4.22□□□□□ -1.73
DDR1-224ENST00000376567 KRTAP19-7Q3SYF9 63 aa4.22□□□□□ -1.73
DDR1-224ENST00000376567 MT1LQ93083 61 aa4.21□□□□□ -1.73
DDR1-224ENST00000376567 MT1EP04732 61 aa4.21□□□□□ -1.74
DDR1-224ENST00000376567 LCE2DQ5TA82 110 aaPredicted RBP4.16□□□□□ -1.74
DDR1-224ENST00000376567 KRTAP19-6Q3LI70 58 aa4.14□□□□□ -1.75
DDR1-224ENST00000376567 LCE3BQ5TA77 95 aa4.13□□□□□ -1.75
DDR1-224ENST00000376567 KRTAP9-6A8MVA2 160 aa4.13□□□□□ -1.75
DDR1-224ENST00000376567 KRTAP9-2Q9BYQ4 174 aa4.11□□□□□ -1.75
DDR1-224ENST00000376567 KRTAP19-3Q7Z4W3 81 aa4.06□□□□□ -1.76
DDR1-224ENST00000376567 SPRR2EP22531 72 aa4.04□□□□□ -1.76
DDR1-224ENST00000376567 SPRR2BP35325 72 aa4.04□□□□□ -1.76
DDR1-224ENST00000376567 SPRR2AP35326 72 aa4.04□□□□□ -1.76
DDR1-224ENST00000376567 MACF1Q9UPN3 7388 aaKnown RBP4.03□□□□□ -1.76
DDR1-224ENST00000376567 MT1MQ8N339 61 aa4.01□□□□□ -1.77
DDR1-224ENST00000376567 KRTAP12-4P60329 112 aa3.95□□□□□ -1.78
DDR1-224ENST00000376567 KRTAP4-9Q9BYQ8 210 aa3.89□□□□□ -1.79
DDR1-224ENST00000376567 SPRR2DP22532 72 aa3.85□□□□□ -1.79
DDR1-224ENST00000376567 KRTAP19-4Q3LI73 84 aa3.85□□□□□ -1.79
DDR1-224ENST00000376567 MDN1Q9NU22 5596 aa3.83□□□□□ -1.8
DDR1-224ENST00000376567 KRTAP2-3P0C7H8 128 aa3.76□□□□□ -1.81
DDR1-224ENST00000376567 KRTAP2-4Q9BYR9 128 aa3.76□□□□□ -1.81
DDR1-224ENST00000376567 KRTAP2-1Q9BYU5 128 aa3.76□□□□□ -1.81
DDR1-224ENST00000376567 KRTAP9-6A0A140TA67 174 aa3.75□□□□□ -1.81
DDR1-224ENST00000376567 LCE3DQ9BYE3 92 aa3.71□□□□□ -1.82
DDR1-224ENST00000376567 LCE5AQ5TCM9 118 aa3.7□□□□□ -1.82
DDR1-224ENST00000376567 KRTAP6-1Q3LI64 71 aa3.66□□□□□ -1.82
DDR1-224ENST00000376567 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.64□□□□□ -1.83
DDR1-224ENST00000376567 LCE1AQ5T7P2 110 aa3.63□□□□□ -1.83
DDR1-224ENST00000376567 MT4P47944 62 aa3.6□□□□□ -1.83
DDR1-224ENST00000376567 LCE3EQ5T5B0 92 aa3.6□□□□□ -1.83
DDR1-224ENST00000376567 KRTAP5-9P26371 169 aa3.54□□□□□ -1.84
DDR1-224ENST00000376567 KRTAP6-3Q3LI67 103 aa3.54□□□□□ -1.84
DDR1-224ENST00000376567 MT1AP04731 61 aa3.53□□□□□ -1.84
DDR1-224ENST00000376567 KRTAP9-7A8MTY7 169 aa3.48□□□□□ -1.85
DDR1-224ENST00000376567 PRM1P04553 51 aa3.46□□□□□ -1.86
DDR1-224ENST00000376567 KRTAP6-2Q3LI66 62 aa3.44□□□□□ -1.86
DDR1-224ENST00000376567 MT3P25713 68 aa3.42□□□□□ -1.86
DDR1-224ENST00000376567 LCE1EQ5T753 118 aa3.4□□□□□ -1.87
DDR1-224ENST00000376567 MUC19Q7Z5P9 8384 aa3.34□□□□□ -1.88
DDR1-224ENST00000376567 NEBP20929 6669 aa3.33□□□□□ -1.88
DDR1-224ENST00000376567 LCE1FQ5T754 118 aa3.31□□□□□ -1.88
DDR1-224ENST00000376567 KRTAP9-4Q9BYQ2 154 aa3.3□□□□□ -1.88
DDR1-224ENST00000376567 LCE1DQ5T752 114 aa3.3□□□□□ -1.88
DDR1-224ENST00000376567 LCE1BQ5T7P3 118 aa3.26□□□□□ -1.89
DDR1-224ENST00000376567 KRTAP2-2Q9BYT5 123 aa3.24□□□□□ -1.89
DDR1-224ENST00000376567 KRTAP4-6Q9BYQ5 205 aa3.2□□□□□ -1.9
DDR1-224ENST00000376567 KRTAP5-5Q701N2 237 aaPredicted RBP3.12□□□□□ -1.91
DDR1-224ENST00000376567 KRTAP20-1Q3LI63 56 aa3.12□□□□□ -1.91
DDR1-224ENST00000376567 LCE4AQ5TA78 99 aa3.01□□□□□ -1.93
DDR1-224ENST00000376567 MUC5ACP98088 5654 aa2.95□□□□□ -1.94
DDR1-224ENST00000376567 KRTAP20-2Q3LI61 65 aa2.93□□□□□ -1.94
DDR1-224ENST00000376567 KRTAP5-4Q6L8H1 288 aa2.93□□□□□ -1.94
DDR1-224ENST00000376567 HMCN1Q96RW7 5635 aa2.9□□□□□ -1.94
DDR1-224ENST00000376567 KRTAP9-9Q9BYP9 154 aa2.78□□□□□ -1.96
DDR1-224ENST00000376567 KRTAP4-11Q9BYQ6 195 aa2.71□□□□□ -1.98
DDR1-224ENST00000376567 KRTAP5-3Q6L8H2 238 aa2.65□□□□□ -1.98
DDR1-224ENST00000376567 KRTAP5-2Q701N4 177 aa2.65□□□□□ -1.98
DDR1-224ENST00000376567 GPR98Q8WXG9 6306 aa2.63□□□□□ -1.99
DDR1-224ENST00000376567 KRTAP4-4Q9BYR3 166 aa2.62□□□□□ -1.99
DDR1-224ENST00000376567 KRTAP4-12Q9BQ66 201 aa2.55□□□□□ -2
DDR1-224ENST00000376567 KRTAP4-2Q9BYR5 136 aa2.55□□□□□ -2
DDR1-224ENST00000376567 AHNAK2Q8IVF2 5795 aa2.51□□□□□ -2.01
DDR1-224ENST00000376567 LCE1CQ5T751 118 aa2.48□□□□□ -2.01
DDR1-224ENST00000376567 MUC5BQ9HC84 5762 aaPredicted RBP2.44□□□□□ -2.02
DDR1-224ENST00000376567 KRTAP5-1Q6L8H4 278 aa2.33□□□□□ -2.04
DDR1-224ENST00000376567 KRTAP5-8O75690 187 aa2.32□□□□□ -2.04
DDR1-224ENST00000376567 KRTAP5-10Q6L8G5 202 aa2.31□□□□□ -2.04
DDR1-224ENST00000376567 KRTAP5-7Q6L8G8 165 aa2.12□□□□□ -2.07
DDR1-224ENST00000376567 KRTAP21-2Q3LI59 83 aa2.1□□□□□ -2.07
DDR1-224ENST00000376567 AHNAKQ09666 5890 aaKnown RBP2.05□□□□□ -2.08
DDR1-224ENST00000376567 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.04□□□□□ -2.08
DDR1-224ENST00000376567 KRTAP5-11Q6L8G4 156 aa1.99□□□□□ -2.09
DDR1-224ENST00000376567 KRTAP21-1Q3LI58 79 aa1.85□□□□□ -2.11
DDR1-224ENST00000376567 PHGR1C9JFL3 82 aa1.72□□□□□ -2.13
DDR1-224ENST00000376567 MUC16Q8WXI7 14507 aa1.14□□□□□ -2.23
Retrieved 77 of 20,778 RNA–protein pairs in 28.6 ms