RNA–Protein interactions for RNA: ENST00000376233.7

ZNF549-202, Transcript of zinc finger protein 549, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ZNF549, Length 4,053 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549-202ENST00000376233 LOC100996750A0A140TA64 210 aa3.53□□□□□ -1.84
ZNF549-202ENST00000376233 FCGBPQ9Y6R7 5405 aaPredicted RBP3.52□□□□□ -1.85
ZNF549-202ENST00000376233 SSPOA2VEC9 5147 aa3.49□□□□□ -1.85
ZNF549-202ENST00000376233 KRTAP19-6Q3LI70 58 aa3.49□□□□□ -1.85
ZNF549-202ENST00000376233 KRTAP19-4Q3LI73 84 aa3.48□□□□□ -1.85
ZNF549-202ENST00000376233 OBSCNQ5VST9 7968 aa3.48□□□□□ -1.85
ZNF549-202ENST00000376233 MUC12Q9UKN1 5478 aa3.47□□□□□ -1.85
ZNF549-202ENST00000376233 KRTAP19-3Q7Z4W3 81 aa3.44□□□□□ -1.86
ZNF549-202ENST00000376233 LCE3BQ5TA77 95 aa3.42□□□□□ -1.86
ZNF549-202ENST00000376233 MT1MQ8N339 61 aa3.41□□□□□ -1.86
ZNF549-202ENST00000376233 KRTAP2-3P0C7H8 128 aa3.38□□□□□ -1.87
ZNF549-202ENST00000376233 KRTAP2-4Q9BYR9 128 aa3.38□□□□□ -1.87
ZNF549-202ENST00000376233 KRTAP2-1Q9BYU5 128 aa3.38□□□□□ -1.87
ZNF549-202ENST00000376233 KRTAP12-4P60329 112 aa3.36□□□□□ -1.87
ZNF549-202ENST00000376233 SYNE2Q8WXH0 6885 aaKnown RBP3.35□□□□□ -1.87
ZNF549-202ENST00000376233 LCE2DQ5TA82 110 aaPredicted RBP3.34□□□□□ -1.88
ZNF549-202ENST00000376233 MACF1Q9UPN3 7388 aaKnown RBP3.28□□□□□ -1.88
ZNF549-202ENST00000376233 SPRR2EP22531 72 aa3.27□□□□□ -1.89
ZNF549-202ENST00000376233 SPRR2BP35325 72 aa3.27□□□□□ -1.89
ZNF549-202ENST00000376233 SPRR2AP35326 72 aa3.27□□□□□ -1.89
ZNF549-202ENST00000376233 KRTAP4-9Q9BYQ8 210 aa3.24□□□□□ -1.89
ZNF549-202ENST00000376233 LCE5AQ5TCM9 118 aa3.18□□□□□ -1.9
ZNF549-202ENST00000376233 KRTAP9-2Q9BYQ4 174 aa3.18□□□□□ -1.9
ZNF549-202ENST00000376233 LCE3DQ9BYE3 92 aa3.14□□□□□ -1.91
ZNF549-202ENST00000376233 SPRR2DP22532 72 aa3.12□□□□□ -1.91
ZNF549-202ENST00000376233 KRTAP6-1Q3LI64 71 aa3.11□□□□□ -1.91
ZNF549-202ENST00000376233 LCE3EQ5T5B0 92 aa3.08□□□□□ -1.92
ZNF549-202ENST00000376233 MDN1Q9NU22 5596 aa3.07□□□□□ -1.92
ZNF549-202ENST00000376233 MT1AP04731 61 aa3.05□□□□□ -1.92
ZNF549-202ENST00000376233 LCE1AQ5T7P2 110 aa3.05□□□□□ -1.92
ZNF549-202ENST00000376233 PRM1P04553 51 aa2.96□□□□□ -1.94
ZNF549-202ENST00000376233 KRTAP9-7A8MTY7 169 aa2.9□□□□□ -1.95
ZNF549-202ENST00000376233 MT3P25713 68 aa2.88□□□□□ -1.95
ZNF549-202ENST00000376233 KRTAP6-2Q3LI66 62 aa2.87□□□□□ -1.95
ZNF549-202ENST00000376233 MT4P47944 62 aa2.85□□□□□ -1.95
ZNF549-202ENST00000376233 KRTAP9-4Q9BYQ2 154 aa2.85□□□□□ -1.95
ZNF549-202ENST00000376233 KRTAP5-9P26371 169 aa2.84□□□□□ -1.95
ZNF549-202ENST00000376233 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.82□□□□□ -1.96
ZNF549-202ENST00000376233 KRTAP6-3Q3LI67 103 aa2.77□□□□□ -1.97
ZNF549-202ENST00000376233 KRTAP9-6A0A140TA67 174 aa2.76□□□□□ -1.97
ZNF549-202ENST00000376233 KRTAP5-5Q701N2 237 aaPredicted RBP2.71□□□□□ -1.98
ZNF549-202ENST00000376233 LCE1DQ5T752 114 aa2.64□□□□□ -1.99
ZNF549-202ENST00000376233 KRTAP4-6Q9BYQ5 205 aa2.62□□□□□ -1.99
ZNF549-202ENST00000376233 LCE1BQ5T7P3 118 aa2.6□□□□□ -1.99
ZNF549-202ENST00000376233 NEBP20929 6669 aa2.54□□□□□ -2
ZNF549-202ENST00000376233 LCE4AQ5TA78 99 aa2.49□□□□□ -2.01
ZNF549-202ENST00000376233 KRTAP20-2Q3LI61 65 aa2.47□□□□□ -2.01
ZNF549-202ENST00000376233 KRTAP2-2Q9BYT5 123 aa2.47□□□□□ -2.01
ZNF549-202ENST00000376233 KRTAP20-1Q3LI63 56 aa2.39□□□□□ -2.03
ZNF549-202ENST00000376233 KRTAP5-4Q6L8H1 288 aa2.39□□□□□ -2.03
ZNF549-202ENST00000376233 HMCN1Q96RW7 5635 aa2.36□□□□□ -2.03
ZNF549-202ENST00000376233 MUC19Q7Z5P9 8384 aa2.29□□□□□ -2.04
ZNF549-202ENST00000376233 MUC5ACP98088 5654 aa2.29□□□□□ -2.04
ZNF549-202ENST00000376233 KRTAP4-11Q9BYQ6 195 aa2.27□□□□□ -2.05
ZNF549-202ENST00000376233 KRTAP5-2Q701N4 177 aa2.2□□□□□ -2.06
ZNF549-202ENST00000376233 KRTAP5-3Q6L8H2 238 aa2.16□□□□□ -2.06
ZNF549-202ENST00000376233 LCE1EQ5T753 118 aa2.12□□□□□ -2.07
ZNF549-202ENST00000376233 KRTAP4-12Q9BQ66 201 aa2.1□□□□□ -2.07
ZNF549-202ENST00000376233 KRTAP4-4Q9BYR3 166 aa2.08□□□□□ -2.08
ZNF549-202ENST00000376233 KRTAP5-10Q6L8G5 202 aa2.05□□□□□ -2.08
ZNF549-202ENST00000376233 KRTAP4-2Q9BYR5 136 aa2.01□□□□□ -2.09
ZNF549-202ENST00000376233 LCE1CQ5T751 118 aa1.99□□□□□ -2.09
ZNF549-202ENST00000376233 AHNAK2Q8IVF2 5795 aa1.96□□□□□ -2.1
ZNF549-202ENST00000376233 KRTAP9-9Q9BYP9 154 aa1.96□□□□□ -2.1
ZNF549-202ENST00000376233 KRTAP5-1Q6L8H4 278 aa1.94□□□□□ -2.1
ZNF549-202ENST00000376233 GPR98Q8WXG9 6306 aa1.91□□□□□ -2.1
ZNF549-202ENST00000376233 LCE1FQ5T754 118 aa1.91□□□□□ -2.1
ZNF549-202ENST00000376233 MUC5BQ9HC84 5762 aaPredicted RBP1.87□□□□□ -2.11
ZNF549-202ENST00000376233 KRTAP5-8O75690 187 aa1.87□□□□□ -2.11
ZNF549-202ENST00000376233 KRTAP21-2Q3LI59 83 aa1.86□□□□□ -2.11
ZNF549-202ENST00000376233 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.72□□□□□ -2.13
ZNF549-202ENST00000376233 KRTAP5-11Q6L8G4 156 aa1.7□□□□□ -2.14
ZNF549-202ENST00000376233 KRTAP5-7Q6L8G8 165 aa1.61□□□□□ -2.15
ZNF549-202ENST00000376233 KRTAP21-1Q3LI58 79 aa1.58□□□□□ -2.16
ZNF549-202ENST00000376233 AHNAKQ09666 5890 aaKnown RBP1.56□□□□□ -2.16
ZNF549-202ENST00000376233 PHGR1C9JFL3 82 aa1.47□□□□□ -2.17
ZNF549-202ENST00000376233 MUC16Q8WXI7 14507 aa0.96□□□□□ -2.26
Retrieved 77 of 20,778 RNA–protein pairs in 121.5 ms