RNA–Protein interactions for RNA: ENST00000375663.7

VARS-215, Transcript of valyl-tRNA synthetase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VARS, Length 4,312 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-215ENST00000375663 USH2AO75445 5202 aa5.43□□□□□ -1.54
VARS-215ENST00000375663 KRTAP19-3Q7Z4W3 81 aa5.41□□□□□ -1.54
VARS-215ENST00000375663 KRTAP19-7Q3SYF9 63 aa5.4□□□□□ -1.55
VARS-215ENST00000375663 KMT2DO14686 5537 aa5.35□□□□□ -1.55
VARS-215ENST00000375663 LCE3DQ9BYE3 92 aa5.32□□□□□ -1.56
VARS-215ENST00000375663 LOC100996750A0A140TA64 210 aa5.3□□□□□ -1.56
VARS-215ENST00000375663 SPRR2DP22532 72 aa5.3□□□□□ -1.56
VARS-215ENST00000375663 FCGBPQ9Y6R7 5405 aaPredicted RBP5.29□□□□□ -1.56
VARS-215ENST00000375663 DSTQ03001 7570 aaKnown RBP5.29□□□□□ -1.56
VARS-215ENST00000375663 KRTAP4-3Q9BYR4 195 aa5.28□□□□□ -1.56
VARS-215ENST00000375663 MT1MQ8N339 61 aa5.28□□□□□ -1.56
VARS-215ENST00000375663 KRTAP2-3P0C7H8 128 aa5.27□□□□□ -1.57
VARS-215ENST00000375663 KRTAP2-4Q9BYR9 128 aa5.27□□□□□ -1.57
VARS-215ENST00000375663 KRTAP2-1Q9BYU5 128 aa5.27□□□□□ -1.57
VARS-215ENST00000375663 KRTAP9-6A8MVA2 160 aa5.26□□□□□ -1.57
VARS-215ENST00000375663 LCE3EQ5T5B0 92 aa5.25□□□□□ -1.57
VARS-215ENST00000375663 LCE2AQ5TA79 106 aaPredicted RBP5.23□□□□□ -1.57
VARS-215ENST00000375663 KRTAP19-6Q3LI70 58 aa5.2□□□□□ -1.58
VARS-215ENST00000375663 SYNE2Q8WXH0 6885 aaKnown RBP5.14□□□□□ -1.59
VARS-215ENST00000375663 MACF1Q9UPN3 7388 aaKnown RBP5.05□□□□□ -1.6
VARS-215ENST00000375663 KRTAP9-2Q9BYQ4 174 aa5.04□□□□□ -1.6
VARS-215ENST00000375663 PRM1P04553 51 aa4.96□□□□□ -1.62
VARS-215ENST00000375663 KRTAP4-9Q9BYQ8 210 aa4.95□□□□□ -1.62
VARS-215ENST00000375663 LCE2DQ5TA82 110 aaPredicted RBP4.9□□□□□ -1.62
VARS-215ENST00000375663 MT4P47944 62 aa4.89□□□□□ -1.63
VARS-215ENST00000375663 MT1AP04731 61 aa4.86□□□□□ -1.63
VARS-215ENST00000375663 MT3P25713 68 aa4.83□□□□□ -1.64
VARS-215ENST00000375663 SSPOA2VEC9 5147 aa4.83□□□□□ -1.64
VARS-215ENST00000375663 MUC12Q9UKN1 5478 aa4.79□□□□□ -1.64
VARS-215ENST00000375663 KRTAP9-6A0A140TA67 174 aa4.74□□□□□ -1.65
VARS-215ENST00000375663 LCE5AQ5TCM9 118 aa4.73□□□□□ -1.65
VARS-215ENST00000375663 KRTAP6-1Q3LI64 71 aa4.72□□□□□ -1.65
VARS-215ENST00000375663 LCE1BQ5T7P3 118 aa4.64□□□□□ -1.67
VARS-215ENST00000375663 LCE1DQ5T752 114 aa4.63□□□□□ -1.67
VARS-215ENST00000375663 MUC19Q7Z5P9 8384 aa4.56□□□□□ -1.68
VARS-215ENST00000375663 MDN1Q9NU22 5596 aa4.54□□□□□ -1.68
VARS-215ENST00000375663 KRTAP9-7A8MTY7 169 aa4.53□□□□□ -1.68
VARS-215ENST00000375663 KRTAP6-2Q3LI66 62 aa4.52□□□□□ -1.69
VARS-215ENST00000375663 LCE1AQ5T7P2 110 aa4.48□□□□□ -1.69
VARS-215ENST00000375663 KRTAP9-4Q9BYQ2 154 aa4.46□□□□□ -1.69
VARS-215ENST00000375663 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.35□□□□□ -1.71
VARS-215ENST00000375663 KRTAP6-3Q3LI67 103 aa4.3□□□□□ -1.72
VARS-215ENST00000375663 KRTAP20-1Q3LI63 56 aa4.23□□□□□ -1.73
VARS-215ENST00000375663 KRTAP2-2Q9BYT5 123 aa4.09□□□□□ -1.75
VARS-215ENST00000375663 NEBP20929 6669 aa4.07□□□□□ -1.76
VARS-215ENST00000375663 KRTAP5-9P26371 169 aa4.04□□□□□ -1.76
VARS-215ENST00000375663 LCE4AQ5TA78 99 aa3.99□□□□□ -1.77
VARS-215ENST00000375663 GPR98Q8WXG9 6306 aa3.98□□□□□ -1.77
VARS-215ENST00000375663 KRTAP5-5Q701N2 237 aaPredicted RBP3.97□□□□□ -1.77
VARS-215ENST00000375663 KRTAP4-6Q9BYQ5 205 aa3.85□□□□□ -1.79
VARS-215ENST00000375663 LCE1CQ5T751 118 aa3.8□□□□□ -1.8
VARS-215ENST00000375663 LCE1EQ5T753 118 aa3.8□□□□□ -1.8
VARS-215ENST00000375663 LCE1FQ5T754 118 aa3.8□□□□□ -1.8
VARS-215ENST00000375663 KRTAP4-11Q9BYQ6 195 aa3.7□□□□□ -1.82
VARS-215ENST00000375663 KRTAP20-2Q3LI61 65 aa3.68□□□□□ -1.82
VARS-215ENST00000375663 MUC5ACP98088 5654 aa3.67□□□□□ -1.82
VARS-215ENST00000375663 HMCN1Q96RW7 5635 aa3.62□□□□□ -1.83
VARS-215ENST00000375663 KRTAP9-9Q9BYP9 154 aa3.47□□□□□ -1.85
VARS-215ENST00000375663 KRTAP4-4Q9BYR3 166 aa3.42□□□□□ -1.86
VARS-215ENST00000375663 KRTAP4-12Q9BQ66 201 aa3.38□□□□□ -1.87
VARS-215ENST00000375663 KRTAP4-2Q9BYR5 136 aa3.38□□□□□ -1.87
VARS-215ENST00000375663 KRTAP5-4Q6L8H1 288 aa3.37□□□□□ -1.87
VARS-215ENST00000375663 AHNAK2Q8IVF2 5795 aa3.28□□□□□ -1.88
VARS-215ENST00000375663 KRTAP5-2Q701N4 177 aa3.09□□□□□ -1.91
VARS-215ENST00000375663 KRTAP5-10Q6L8G5 202 aa3.07□□□□□ -1.92
VARS-215ENST00000375663 KRTAP5-3Q6L8H2 238 aa3.01□□□□□ -1.93
VARS-215ENST00000375663 KRTAP5-8O75690 187 aa2.8□□□□□ -1.96
VARS-215ENST00000375663 AHNAKQ09666 5890 aaKnown RBP2.74□□□□□ -1.97
VARS-215ENST00000375663 KRTAP5-1Q6L8H4 278 aa2.7□□□□□ -1.98
VARS-215ENST00000375663 MUC5BQ9HC84 5762 aaPredicted RBP2.65□□□□□ -1.98
VARS-215ENST00000375663 KRTAP21-2Q3LI59 83 aa2.64□□□□□ -1.99
VARS-215ENST00000375663 KRTAP5-11Q6L8G4 156 aa2.55□□□□□ -2
VARS-215ENST00000375663 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.47□□□□□ -2.01
VARS-215ENST00000375663 KRTAP21-1Q3LI58 79 aa2.46□□□□□ -2.02
VARS-215ENST00000375663 PHGR1C9JFL3 82 aa2.32□□□□□ -2.04
VARS-215ENST00000375663 KRTAP5-7Q6L8G8 165 aa2.26□□□□□ -2.05
VARS-215ENST00000375663 MUC16Q8WXI7 14507 aa1.5□□□□□ -2.17
Retrieved 77 of 20,778 RNA–protein pairs in 11.6 ms