RNA–Protein interactions for RNA: ENST00000375300.5

SIK3-201, Transcript of SIK family kinase 3, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SIK3, Length 6,213 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-201ENST00000375300 KRTAP4-3Q9BYR4 195 aa5.16□□□□□ -1.58
SIK3-201ENST00000375300 LOC100996750A0A140TA64 210 aa5.15□□□□□ -1.59
SIK3-201ENST00000375300 LCE3DQ9BYE3 92 aa5.14□□□□□ -1.59
SIK3-201ENST00000375300 KRTAP19-3Q7Z4W3 81 aa5.13□□□□□ -1.59
SIK3-201ENST00000375300 LCE2AQ5TA79 106 aaPredicted RBP5.08□□□□□ -1.6
SIK3-201ENST00000375300 LCE3EQ5T5B0 92 aa5.04□□□□□ -1.6
SIK3-201ENST00000375300 KRTAP19-6Q3LI70 58 aa5.01□□□□□ -1.61
SIK3-201ENST00000375300 MT1MQ8N339 61 aa4.98□□□□□ -1.61
SIK3-201ENST00000375300 MT4P47944 62 aa4.97□□□□□ -1.61
SIK3-201ENST00000375300 SYNE2Q8WXH0 6885 aaKnown RBP4.93□□□□□ -1.62
SIK3-201ENST00000375300 LCE2DQ5TA82 110 aaPredicted RBP4.9□□□□□ -1.63
SIK3-201ENST00000375300 KRTAP19-7Q3SYF9 63 aa4.9□□□□□ -1.63
SIK3-201ENST00000375300 PRM1P04553 51 aa4.84□□□□□ -1.63
SIK3-201ENST00000375300 KRTAP4-9Q9BYQ8 210 aa4.82□□□□□ -1.64
SIK3-201ENST00000375300 KRTAP9-6A0A140TA67 174 aa4.79□□□□□ -1.64
SIK3-201ENST00000375300 KRTAP9-6A8MVA2 160 aa4.73□□□□□ -1.65
SIK3-201ENST00000375300 KMT2DO14686 5537 aa4.72□□□□□ -1.65
SIK3-201ENST00000375300 KRTAP2-3P0C7H8 128 aa4.71□□□□□ -1.65
SIK3-201ENST00000375300 KRTAP2-4Q9BYR9 128 aa4.71□□□□□ -1.65
SIK3-201ENST00000375300 KRTAP2-1Q9BYU5 128 aa4.71□□□□□ -1.65
SIK3-201ENST00000375300 MT3P25713 68 aa4.65□□□□□ -1.66
SIK3-201ENST00000375300 USH2AO75445 5202 aa4.6□□□□□ -1.67
SIK3-201ENST00000375300 SYNE1Q8NF91 8797 aaKnown RBP4.59□□□□□ -1.67
SIK3-201ENST00000375300 LCE1BQ5T7P3 118 aa4.55□□□□□ -1.68
SIK3-201ENST00000375300 LCE1DQ5T752 114 aa4.55□□□□□ -1.68
SIK3-201ENST00000375300 MT1AP04731 61 aa4.54□□□□□ -1.68
SIK3-201ENST00000375300 KRTAP9-7A8MTY7 169 aa4.53□□□□□ -1.68
SIK3-201ENST00000375300 KRTAP6-1Q3LI64 71 aa4.47□□□□□ -1.69
SIK3-201ENST00000375300 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.47□□□□□ -1.69
SIK3-201ENST00000375300 KRTAP20-1Q3LI63 56 aa4.4□□□□□ -1.71
SIK3-201ENST00000375300 LCE1AQ5T7P2 110 aa4.4□□□□□ -1.71
SIK3-201ENST00000375300 FCGBPQ9Y6R7 5405 aaPredicted RBP4.39□□□□□ -1.71
SIK3-201ENST00000375300 LCE5AQ5TCM9 118 aa4.37□□□□□ -1.71
SIK3-201ENST00000375300 KRTAP6-3Q3LI67 103 aa4.35□□□□□ -1.71
SIK3-201ENST00000375300 DSTQ03001 7570 aaKnown RBP4.34□□□□□ -1.71
SIK3-201ENST00000375300 KRTAP6-2Q3LI66 62 aa4.34□□□□□ -1.71
SIK3-201ENST00000375300 MACF1Q9UPN3 7388 aaKnown RBP4.34□□□□□ -1.72
SIK3-201ENST00000375300 OBSCNQ5VST9 7968 aa4.3□□□□□ -1.72
SIK3-201ENST00000375300 KRTAP9-4Q9BYQ2 154 aa4.23□□□□□ -1.73
SIK3-201ENST00000375300 MUC12Q9UKN1 5478 aa4.15□□□□□ -1.75
SIK3-201ENST00000375300 SSPOA2VEC9 5147 aa4.14□□□□□ -1.75
SIK3-201ENST00000375300 KRTAP2-2Q9BYT5 123 aa4.07□□□□□ -1.76
SIK3-201ENST00000375300 LCE4AQ5TA78 99 aa4□□□□□ -1.77
SIK3-201ENST00000375300 KRTAP4-6Q9BYQ5 205 aa3.89□□□□□ -1.79
SIK3-201ENST00000375300 KRTAP5-9P26371 169 aa3.83□□□□□ -1.8
SIK3-201ENST00000375300 NEBP20929 6669 aa3.78□□□□□ -1.8
SIK3-201ENST00000375300 LCE1CQ5T751 118 aa3.77□□□□□ -1.81
SIK3-201ENST00000375300 LCE1EQ5T753 118 aa3.77□□□□□ -1.81
SIK3-201ENST00000375300 LCE1FQ5T754 118 aa3.77□□□□□ -1.81
SIK3-201ENST00000375300 KRTAP4-11Q9BYQ6 195 aa3.64□□□□□ -1.83
SIK3-201ENST00000375300 KRTAP20-2Q3LI61 65 aa3.62□□□□□ -1.83
SIK3-201ENST00000375300 KRTAP5-5Q701N2 237 aaPredicted RBP3.54□□□□□ -1.84
SIK3-201ENST00000375300 KRTAP9-9Q9BYP9 154 aa3.5□□□□□ -1.85
SIK3-201ENST00000375300 MDN1Q9NU22 5596 aa3.5□□□□□ -1.85
SIK3-201ENST00000375300 KRTAP4-4Q9BYR3 166 aa3.42□□□□□ -1.86
SIK3-201ENST00000375300 KRTAP4-12Q9BQ66 201 aa3.4□□□□□ -1.87
SIK3-201ENST00000375300 KRTAP4-2Q9BYR5 136 aa3.4□□□□□ -1.87
SIK3-201ENST00000375300 KRTAP5-4Q6L8H1 288 aa3.29□□□□□ -1.88
SIK3-201ENST00000375300 MUC19Q7Z5P9 8384 aa3.28□□□□□ -1.88
SIK3-201ENST00000375300 MUC5ACP98088 5654 aa3.06□□□□□ -1.92
SIK3-201ENST00000375300 KRTAP5-3Q6L8H2 238 aa2.97□□□□□ -1.93
SIK3-201ENST00000375300 GPR98Q8WXG9 6306 aa2.87□□□□□ -1.95
SIK3-201ENST00000375300 HMCN1Q96RW7 5635 aa2.83□□□□□ -1.96
SIK3-201ENST00000375300 KRTAP5-8O75690 187 aa2.82□□□□□ -1.96
SIK3-201ENST00000375300 KRTAP5-10Q6L8G5 202 aa2.72□□□□□ -1.97
SIK3-201ENST00000375300 KRTAP5-2Q701N4 177 aa2.66□□□□□ -1.98
SIK3-201ENST00000375300 AHNAK2Q8IVF2 5795 aa2.55□□□□□ -2
SIK3-201ENST00000375300 KRTAP5-1Q6L8H4 278 aa2.44□□□□□ -2.02
SIK3-201ENST00000375300 PHGR1C9JFL3 82 aa2.37□□□□□ -2.03
SIK3-201ENST00000375300 MUC5BQ9HC84 5762 aaPredicted RBP2.34□□□□□ -2.03
SIK3-201ENST00000375300 KRTAP21-2Q3LI59 83 aa2.33□□□□□ -2.04
SIK3-201ENST00000375300 KRTAP5-11Q6L8G4 156 aa2.25□□□□□ -2.05
SIK3-201ENST00000375300 AHNAKQ09666 5890 aaKnown RBP2.21□□□□□ -2.06
SIK3-201ENST00000375300 KRTAP21-1Q3LI58 79 aa2.14□□□□□ -2.07
SIK3-201ENST00000375300 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.03□□□□□ -2.09
SIK3-201ENST00000375300 KRTAP5-7Q6L8G8 165 aa1.92□□□□□ -2.1
SIK3-201ENST00000375300 MUC16Q8WXI7 14507 aa1.45□□□□□ -2.18
Retrieved 77 of 20,778 RNA–protein pairs in 73.6 ms