RNA–Protein interactions for RNA: ENST00000375254.7

UBR4-204, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBR4, Length 15,906 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-204ENST00000375254 KRTAP9-8Q9BYQ0 159 aa1.96□□□□□ -2.1
UBR4-204ENST00000375254 KMT2DO14686 5537 aa1.94□□□□□ -2.1
UBR4-204ENST00000375254 MDN1Q9NU22 5596 aa1.94□□□□□ -2.1
UBR4-204ENST00000375254 KRTAP9-3Q9BYQ3 159 aa1.93□□□□□ -2.1
UBR4-204ENST00000375254 KRTAP9-6A8MVA2 160 aa1.92□□□□□ -2.1
UBR4-204ENST00000375254 LCE2BO14633 110 aa1.92□□□□□ -2.1
UBR4-204ENST00000375254 KRTAP4-7Q9BYR0 210 aa1.92□□□□□ -2.1
UBR4-204ENST00000375254 MACF1Q9UPN3 7388 aaKnown RBP1.92□□□□□ -2.1
UBR4-204ENST00000375254 HMCN2Q8NDA2 5059 aa1.92□□□□□ -2.1
UBR4-204ENST00000375254 GPR98Q8WXG9 6306 aa1.91□□□□□ -2.1
UBR4-204ENST00000375254 MUC2Q02817 5179 aa1.9□□□□□ -2.11
UBR4-204ENST00000375254 KRTAP4-8A0A0G2JLE6 195 aa1.89□□□□□ -2.11
UBR4-204ENST00000375254 KRTAP4-8Q9BYQ9 185 aa1.89□□□□□ -2.11
UBR4-204ENST00000375254 SPRR2DP22532 72 aa1.89□□□□□ -2.11
UBR4-204ENST00000375254 KRTAP2-2Q9BYT5 123 aa1.87□□□□□ -2.11
UBR4-204ENST00000375254 MUC12Q9UKN1 5478 aa1.85□□□□□ -2.11
UBR4-204ENST00000375254 SPRR2EP22531 72 aa1.84□□□□□ -2.11
UBR4-204ENST00000375254 FCGBPQ9Y6R7 5405 aaPredicted RBP1.82□□□□□ -2.12
UBR4-204ENST00000375254 KRTAP6-2Q3LI66 62 aa1.8□□□□□ -2.12
UBR4-204ENST00000375254 KRTAP19-7Q3SYF9 63 aa1.77□□□□□ -2.13
UBR4-204ENST00000375254 USH2AO75445 5202 aa1.76□□□□□ -2.13
UBR4-204ENST00000375254 KRTAP4-3Q9BYR4 195 aa1.75□□□□□ -2.13
UBR4-204ENST00000375254 LOC100996750A0A140TA64 210 aa1.75□□□□□ -2.13
UBR4-204ENST00000375254 DSTQ03001 7570 aaKnown RBP1.73□□□□□ -2.13
UBR4-204ENST00000375254 LCE2DQ5TA82 110 aaPredicted RBP1.72□□□□□ -2.13
UBR4-204ENST00000375254 LCE1BQ5T7P3 118 aa1.71□□□□□ -2.14
UBR4-204ENST00000375254 SYNE1Q8NF91 8797 aaKnown RBP1.71□□□□□ -2.14
UBR4-204ENST00000375254 KRTAP9-4Q9BYQ2 154 aa1.7□□□□□ -2.14
UBR4-204ENST00000375254 KRTAP4-9Q9BYQ8 210 aa1.7□□□□□ -2.14
UBR4-204ENST00000375254 KRTAP9-2Q9BYQ4 174 aa1.69□□□□□ -2.14
UBR4-204ENST00000375254 KRTAP19-6Q3LI70 58 aa1.68□□□□□ -2.14
UBR4-204ENST00000375254 KRTAP9-7A8MTY7 169 aa1.67□□□□□ -2.14
UBR4-204ENST00000375254 NEBP20929 6669 aa1.66□□□□□ -2.14
UBR4-204ENST00000375254 LCE1AQ5T7P2 110 aa1.66□□□□□ -2.14
UBR4-204ENST00000375254 LCE1DQ5T752 114 aa1.66□□□□□ -2.14
UBR4-204ENST00000375254 AHNAK2Q8IVF2 5795 aa1.65□□□□□ -2.15
UBR4-204ENST00000375254 KRTAP9-6A0A140TA67 174 aa1.65□□□□□ -2.15
UBR4-204ENST00000375254 KRTAP6-3Q3LI67 103 aa1.59□□□□□ -2.16
UBR4-204ENST00000375254 KRTAP6-1Q3LI64 71 aa1.58□□□□□ -2.16
UBR4-204ENST00000375254 SSPOA2VEC9 5147 aa1.58□□□□□ -2.16
UBR4-204ENST00000375254 LCE5AQ5TCM9 118 aa1.57□□□□□ -2.16
UBR4-204ENST00000375254 OBSCNQ5VST9 7968 aa1.56□□□□□ -2.16
UBR4-204ENST00000375254 HMCN1Q96RW7 5635 aa1.55□□□□□ -2.16
UBR4-204ENST00000375254 KRTAP5-5Q701N2 237 aaPredicted RBP1.53□□□□□ -2.16
UBR4-204ENST00000375254 LCE4AQ5TA78 99 aa1.53□□□□□ -2.17
UBR4-204ENST00000375254 LCE1EQ5T753 118 aa1.52□□□□□ -2.17
UBR4-204ENST00000375254 MUC5BQ9HC84 5762 aaPredicted RBP1.5□□□□□ -2.17
UBR4-204ENST00000375254 MT4P47944 62 aa1.5□□□□□ -2.17
UBR4-204ENST00000375254 KRTAP20-1Q3LI63 56 aa1.49□□□□□ -2.17
UBR4-204ENST00000375254 LCE2AQ5TA79 106 aaPredicted RBP1.49□□□□□ -2.17
UBR4-204ENST00000375254 AHNAKQ09666 5890 aaKnown RBP1.48□□□□□ -2.17
UBR4-204ENST00000375254 MUC5ACP98088 5654 aa1.46□□□□□ -2.18
UBR4-204ENST00000375254 KRTAP4-11Q9BYQ6 195 aa1.42□□□□□ -2.18
UBR4-204ENST00000375254 LCE1CQ5T751 118 aa1.42□□□□□ -2.18
UBR4-204ENST00000375254 LCE1FQ5T754 118 aa1.42□□□□□ -2.18
UBR4-204ENST00000375254 KRTAP9-9Q9BYP9 154 aa1.31□□□□□ -2.2
UBR4-204ENST00000375254 KRTAP9-1A8MXZ3 250 aaPredicted RBP1.31□□□□□ -2.2
UBR4-204ENST00000375254 MUC19Q7Z5P9 8384 aa1.27□□□□□ -2.21
UBR4-204ENST00000375254 KRTAP20-2Q3LI61 65 aa1.15□□□□□ -2.23
UBR4-204ENST00000375254 KRTAP5-9P26371 169 aa1.14□□□□□ -2.23
UBR4-204ENST00000375254 KRTAP4-6Q9BYQ5 205 aa1.14□□□□□ -2.23
UBR4-204ENST00000375254 KRTAP5-4Q6L8H1 288 aa1.08□□□□□ -2.24
UBR4-204ENST00000375254 KRTAP4-4Q9BYR3 166 aa1.07□□□□□ -2.24
UBR4-204ENST00000375254 KRTAP21-1Q3LI58 79 aa1.06□□□□□ -2.24
UBR4-204ENST00000375254 KRTAP5-10Q6L8G5 202 aa1.05□□□□□ -2.24
UBR4-204ENST00000375254 KRTAP5-2Q701N4 177 aa1.01□□□□□ -2.25
UBR4-204ENST00000375254 KRTAP4-12Q9BQ66 201 aa0.99□□□□□ -2.25
UBR4-204ENST00000375254 KRTAP4-2Q9BYR5 136 aa0.99□□□□□ -2.25
UBR4-204ENST00000375254 KRTAP5-3Q6L8H2 238 aa0.97□□□□□ -2.25
UBR4-204ENST00000375254 KRTAP5-1Q6L8H4 278 aa0.93□□□□□ -2.26
UBR4-204ENST00000375254 KRTAP21-2Q3LI59 83 aa0.9□□□□□ -2.27
UBR4-204ENST00000375254 KRTAP5-11Q6L8G4 156 aa0.87□□□□□ -2.27
UBR4-204ENST00000375254 MUC16Q8WXI7 14507 aa0.86□□□□□ -2.27
UBR4-204ENST00000375254 KRTAP5-6Q6L8G9 129 aaPredicted RBP0.85□□□□□ -2.27
UBR4-204ENST00000375254 PHGR1C9JFL3 82 aa0.83□□□□□ -2.28
UBR4-204ENST00000375254 KRTAP5-8O75690 187 aa0.75□□□□□ -2.29
UBR4-204ENST00000375254 KRTAP5-7Q6L8G8 165 aa0.74□□□□□ -2.29
Retrieved 77 of 20,778 RNA–protein pairs in 50 ms