RNA–Protein interactions for RNA: ENST00000374723.5

SLC44A1-202, Transcript of solute carrier family 44 member 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SLC44A1, Length 9,640 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1-202ENST00000374723 LCE1CQ5T751 118 aa3.68□□□□□ -1.82
SLC44A1-202ENST00000374723 LCE1EQ5T753 118 aa3.68□□□□□ -1.82
SLC44A1-202ENST00000374723 LCE1FQ5T754 118 aa3.68□□□□□ -1.82
SLC44A1-202ENST00000374723 LCE1AQ5T7P2 110 aa3.68□□□□□ -1.82
SLC44A1-202ENST00000374723 KRTAP19-2Q3LHN2 52 aa3.68□□□□□ -1.82
SLC44A1-202ENST00000374723 KRTAP2-3P0C7H8 128 aa3.68□□□□□ -1.82
SLC44A1-202ENST00000374723 KRTAP2-4Q9BYR9 128 aa3.68□□□□□ -1.82
SLC44A1-202ENST00000374723 KRTAP2-1Q9BYU5 128 aa3.68□□□□□ -1.82
SLC44A1-202ENST00000374723 SYNE2Q8WXH0 6885 aaKnown RBP3.63□□□□□ -1.83
SLC44A1-202ENST00000374723 KRTAP9-7A8MTY7 169 aa3.63□□□□□ -1.83
SLC44A1-202ENST00000374723 KRTAP6-2Q3LI66 62 aa3.56□□□□□ -1.84
SLC44A1-202ENST00000374723 MUC17Q685J3 4493 aa3.55□□□□□ -1.84
SLC44A1-202ENST00000374723 KRTAP19-7Q3SYF9 63 aa3.54□□□□□ -1.84
SLC44A1-202ENST00000374723 KMT2CQ8NEZ4 4911 aaKnown RBP3.51□□□□□ -1.85
SLC44A1-202ENST00000374723 LCE4AQ5TA78 99 aa3.51□□□□□ -1.85
SLC44A1-202ENST00000374723 HERC2O95714 4834 aa3.49□□□□□ -1.85
SLC44A1-202ENST00000374723 RYR2Q92736 4967 aa3.48□□□□□ -1.85
SLC44A1-202ENST00000374723 KRTAP6-3Q3LI67 103 aa3.47□□□□□ -1.85
SLC44A1-202ENST00000374723 KRTAP6-1Q3LI64 71 aa3.46□□□□□ -1.86
SLC44A1-202ENST00000374723 PCLOQ9Y6V0 5065 aa3.46□□□□□ -1.86
SLC44A1-202ENST00000374723 KRTAP9-4Q9BYQ2 154 aa3.46□□□□□ -1.86
SLC44A1-202ENST00000374723 LCE2AQ5TA79 106 aaPredicted RBP3.44□□□□□ -1.86
SLC44A1-202ENST00000374723 KRTAP2-2Q9BYT5 123 aa3.42□□□□□ -1.86
SLC44A1-202ENST00000374723 HYDINQ4G0P3 5121 aa3.39□□□□□ -1.87
SLC44A1-202ENST00000374723 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.38□□□□□ -1.87
SLC44A1-202ENST00000374723 HERC1Q15751 4861 aa3.35□□□□□ -1.87
SLC44A1-202ENST00000374723 KRTAP9-9Q9BYP9 154 aa3.31□□□□□ -1.88
SLC44A1-202ENST00000374723 KIAA1109Q2LD37 5005 aa3.3□□□□□ -1.88
SLC44A1-202ENST00000374723 HMCN2Q8NDA2 5059 aa3.19□□□□□ -1.9
SLC44A1-202ENST00000374723 KRTAP9-6A8MVA2 160 aa3.19□□□□□ -1.9
SLC44A1-202ENST00000374723 BIRC6Q9NR09 4857 aa3.18□□□□□ -1.9
SLC44A1-202ENST00000374723 FSIP2Q5CZC0 6907 aa3.17□□□□□ -1.9
SLC44A1-202ENST00000374723 SYNE1Q8NF91 8797 aaKnown RBP3.14□□□□□ -1.91
SLC44A1-202ENST00000374723 EPPK1P58107 5090 aaKnown RBP3.13□□□□□ -1.91
SLC44A1-202ENST00000374723 MUC2Q02817 5179 aa3.02□□□□□ -1.93
SLC44A1-202ENST00000374723 KRTAP4-11Q9BYQ6 195 aa2.99□□□□□ -1.93
SLC44A1-202ENST00000374723 KRTAP20-2Q3LI61 65 aa2.96□□□□□ -1.94
SLC44A1-202ENST00000374723 OBSCNQ5VST9 7968 aa2.92□□□□□ -1.94
SLC44A1-202ENST00000374723 FAT4Q6V0I7 4981 aa2.91□□□□□ -1.94
SLC44A1-202ENST00000374723 RNF213Q63HN8 5207 aa2.88□□□□□ -1.95
SLC44A1-202ENST00000374723 KRTAP4-6Q9BYQ5 205 aa2.87□□□□□ -1.95
SLC44A1-202ENST00000374723 UBR4Q5T4S7 5183 aa2.83□□□□□ -1.96
SLC44A1-202ENST00000374723 KRTAP4-4Q9BYR3 166 aa2.82□□□□□ -1.96
SLC44A1-202ENST00000374723 KRTAP4-12Q9BQ66 201 aa2.78□□□□□ -1.96
SLC44A1-202ENST00000374723 KRTAP4-2Q9BYR5 136 aa2.78□□□□□ -1.96
SLC44A1-202ENST00000374723 ABCA13Q86UQ4 5058 aa2.74□□□□□ -1.97
SLC44A1-202ENST00000374723 KRTAP5-9P26371 169 aa2.71□□□□□ -1.98
SLC44A1-202ENST00000374723 DSTQ03001 7570 aaKnown RBP2.64□□□□□ -1.99
SLC44A1-202ENST00000374723 NEBP20929 6669 aa2.62□□□□□ -1.99
SLC44A1-202ENST00000374723 KMT2DO14686 5537 aa2.59□□□□□ -1.99
SLC44A1-202ENST00000374723 KRTAP5-4Q6L8H1 288 aa2.58□□□□□ -2
SLC44A1-202ENST00000374723 MACF1Q9UPN3 7388 aaKnown RBP2.57□□□□□ -2
SLC44A1-202ENST00000374723 FCGBPQ9Y6R7 5405 aaPredicted RBP2.54□□□□□ -2
SLC44A1-202ENST00000374723 USH2AO75445 5202 aa2.41□□□□□ -2.02
SLC44A1-202ENST00000374723 KRTAP5-5Q701N2 237 aaPredicted RBP2.35□□□□□ -2.03
SLC44A1-202ENST00000374723 SSPOA2VEC9 5147 aa2.29□□□□□ -2.04
SLC44A1-202ENST00000374723 MUC19Q7Z5P9 8384 aa2.27□□□□□ -2.05
SLC44A1-202ENST00000374723 MDN1Q9NU22 5596 aa2.23□□□□□ -2.05
SLC44A1-202ENST00000374723 KRTAP5-3Q6L8H2 238 aa2.22□□□□□ -2.05
SLC44A1-202ENST00000374723 PHGR1C9JFL3 82 aa2.17□□□□□ -2.06
SLC44A1-202ENST00000374723 GPR98Q8WXG9 6306 aa2.15□□□□□ -2.07
SLC44A1-202ENST00000374723 MUC12Q9UKN1 5478 aa2.12□□□□□ -2.07
SLC44A1-202ENST00000374723 KRTAP5-8O75690 187 aa2.05□□□□□ -2.08
SLC44A1-202ENST00000374723 MUC5ACP98088 5654 aa2.01□□□□□ -2.09
SLC44A1-202ENST00000374723 KRTAP5-10Q6L8G5 202 aa1.9□□□□□ -2.1
SLC44A1-202ENST00000374723 KRTAP5-2Q701N4 177 aa1.82□□□□□ -2.12
SLC44A1-202ENST00000374723 MUC5BQ9HC84 5762 aaPredicted RBP1.79□□□□□ -2.12
SLC44A1-202ENST00000374723 HMCN1Q96RW7 5635 aa1.76□□□□□ -2.13
SLC44A1-202ENST00000374723 KRTAP5-1Q6L8H4 278 aa1.74□□□□□ -2.13
SLC44A1-202ENST00000374723 KRTAP5-11Q6L8G4 156 aa1.72□□□□□ -2.13
SLC44A1-202ENST00000374723 AHNAK2Q8IVF2 5795 aa1.58□□□□□ -2.16
SLC44A1-202ENST00000374723 KRTAP21-2Q3LI59 83 aa1.57□□□□□ -2.16
SLC44A1-202ENST00000374723 AHNAKQ09666 5890 aaKnown RBP1.52□□□□□ -2.17
SLC44A1-202ENST00000374723 KRTAP21-1Q3LI58 79 aa1.51□□□□□ -2.17
SLC44A1-202ENST00000374723 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.41□□□□□ -2.18
SLC44A1-202ENST00000374723 KRTAP5-7Q6L8G8 165 aa1.3□□□□□ -2.2
SLC44A1-202ENST00000374723 MUC16Q8WXI7 14507 aa1.23□□□□□ -2.21
Retrieved 77 of 20,778 RNA–protein pairs in 11.2 ms