RNA–Protein interactions for RNA: ENST00000374720.7

SLC44A1-201, Transcript of solute carrier family 44 member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SLC44A1, Length 10,511 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1-201ENST00000374720 KRTAP2-1Q9BYU5 128 aa3.27□□□□□ -1.89
SLC44A1-201ENST00000374720 MT1AP04731 61 aa3.25□□□□□ -1.89
SLC44A1-201ENST00000374720 LCE1CQ5T751 118 aa3.24□□□□□ -1.89
SLC44A1-201ENST00000374720 LCE1EQ5T753 118 aa3.24□□□□□ -1.89
SLC44A1-201ENST00000374720 LCE1FQ5T754 118 aa3.24□□□□□ -1.89
SLC44A1-201ENST00000374720 LCE1AQ5T7P2 110 aa3.24□□□□□ -1.89
SLC44A1-201ENST00000374720 LRP2P98164 4655 aa3.21□□□□□ -1.9
SLC44A1-201ENST00000374720 KRTAP6-2Q3LI66 62 aa3.19□□□□□ -1.9
SLC44A1-201ENST00000374720 SYNE2Q8WXH0 6885 aaKnown RBP3.15□□□□□ -1.91
SLC44A1-201ENST00000374720 KRTAP19-2Q3LHN2 52 aa3.13□□□□□ -1.91
SLC44A1-201ENST00000374720 KRTAP9-7A8MTY7 169 aa3.13□□□□□ -1.91
SLC44A1-201ENST00000374720 KRTAP19-7Q3SYF9 63 aa3.09□□□□□ -1.91
SLC44A1-201ENST00000374720 KRTAP6-1Q3LI64 71 aa3.06□□□□□ -1.92
SLC44A1-201ENST00000374720 KMT2CQ8NEZ4 4911 aaKnown RBP3.04□□□□□ -1.92
SLC44A1-201ENST00000374720 HERC2O95714 4834 aa3.04□□□□□ -1.92
SLC44A1-201ENST00000374720 MUC17Q685J3 4493 aa3.03□□□□□ -1.92
SLC44A1-201ENST00000374720 KRTAP9-4Q9BYQ2 154 aa3.01□□□□□ -1.93
SLC44A1-201ENST00000374720 RYR2Q92736 4967 aa2.99□□□□□ -1.93
SLC44A1-201ENST00000374720 LCE4AQ5TA78 99 aa2.99□□□□□ -1.93
SLC44A1-201ENST00000374720 PCLOQ9Y6V0 5065 aa2.98□□□□□ -1.93
SLC44A1-201ENST00000374720 KRTAP6-3Q3LI67 103 aa2.96□□□□□ -1.94
SLC44A1-201ENST00000374720 KRTAP2-2Q9BYT5 123 aa2.93□□□□□ -1.94
SLC44A1-201ENST00000374720 LCE2AQ5TA79 106 aaPredicted RBP2.92□□□□□ -1.94
SLC44A1-201ENST00000374720 HERC1Q15751 4861 aa2.91□□□□□ -1.94
SLC44A1-201ENST00000374720 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.91□□□□□ -1.94
SLC44A1-201ENST00000374720 HYDINQ4G0P3 5121 aa2.91□□□□□ -1.94
SLC44A1-201ENST00000374720 KRTAP9-6A8MVA2 160 aa2.88□□□□□ -1.95
SLC44A1-201ENST00000374720 KIAA1109Q2LD37 5005 aa2.87□□□□□ -1.95
SLC44A1-201ENST00000374720 KRTAP9-9Q9BYP9 154 aa2.85□□□□□ -1.95
SLC44A1-201ENST00000374720 SYNE1Q8NF91 8797 aaKnown RBP2.79□□□□□ -1.96
SLC44A1-201ENST00000374720 BIRC6Q9NR09 4857 aa2.78□□□□□ -1.96
SLC44A1-201ENST00000374720 FSIP2Q5CZC0 6907 aa2.78□□□□□ -1.96
SLC44A1-201ENST00000374720 HMCN2Q8NDA2 5059 aa2.75□□□□□ -1.97
SLC44A1-201ENST00000374720 EPPK1P58107 5090 aaKnown RBP2.75□□□□□ -1.97
SLC44A1-201ENST00000374720 KRTAP4-11Q9BYQ6 195 aa2.73□□□□□ -1.97
SLC44A1-201ENST00000374720 MUC2Q02817 5179 aa2.65□□□□□ -1.98
SLC44A1-201ENST00000374720 KRTAP20-2Q3LI61 65 aa2.63□□□□□ -1.99
SLC44A1-201ENST00000374720 OBSCNQ5VST9 7968 aa2.6□□□□□ -1.99
SLC44A1-201ENST00000374720 FAT4Q6V0I7 4981 aa2.53□□□□□ -2
SLC44A1-201ENST00000374720 KRTAP4-4Q9BYR3 166 aa2.52□□□□□ -2.01
SLC44A1-201ENST00000374720 RNF213Q63HN8 5207 aa2.49□□□□□ -2.01
SLC44A1-201ENST00000374720 KRTAP4-6Q9BYQ5 205 aa2.48□□□□□ -2.01
SLC44A1-201ENST00000374720 UBR4Q5T4S7 5183 aa2.48□□□□□ -2.01
SLC44A1-201ENST00000374720 KRTAP4-12Q9BQ66 201 aa2.45□□□□□ -2.02
SLC44A1-201ENST00000374720 KRTAP4-2Q9BYR5 136 aa2.45□□□□□ -2.02
SLC44A1-201ENST00000374720 ABCA13Q86UQ4 5058 aa2.36□□□□□ -2.03
SLC44A1-201ENST00000374720 DSTQ03001 7570 aaKnown RBP2.33□□□□□ -2.04
SLC44A1-201ENST00000374720 MACF1Q9UPN3 7388 aaKnown RBP2.28□□□□□ -2.04
SLC44A1-201ENST00000374720 KRTAP5-9P26371 169 aa2.28□□□□□ -2.04
SLC44A1-201ENST00000374720 KMT2DO14686 5537 aa2.25□□□□□ -2.05
SLC44A1-201ENST00000374720 FCGBPQ9Y6R7 5405 aaPredicted RBP2.25□□□□□ -2.05
SLC44A1-201ENST00000374720 NEBP20929 6669 aa2.24□□□□□ -2.05
SLC44A1-201ENST00000374720 KRTAP5-4Q6L8H1 288 aa2.19□□□□□ -2.06
SLC44A1-201ENST00000374720 KRTAP5-5Q701N2 237 aaPredicted RBP2.16□□□□□ -2.06
SLC44A1-201ENST00000374720 USH2AO75445 5202 aa2.12□□□□□ -2.07
SLC44A1-201ENST00000374720 MUC19Q7Z5P9 8384 aa2.06□□□□□ -2.08
SLC44A1-201ENST00000374720 SSPOA2VEC9 5147 aa2□□□□□ -2.09
SLC44A1-201ENST00000374720 MDN1Q9NU22 5596 aa1.94□□□□□ -2.1
SLC44A1-201ENST00000374720 KRTAP5-3Q6L8H2 238 aa1.9□□□□□ -2.11
SLC44A1-201ENST00000374720 PHGR1C9JFL3 82 aa1.89□□□□□ -2.11
SLC44A1-201ENST00000374720 MUC12Q9UKN1 5478 aa1.85□□□□□ -2.11
SLC44A1-201ENST00000374720 GPR98Q8WXG9 6306 aa1.82□□□□□ -2.12
SLC44A1-201ENST00000374720 KRTAP5-8O75690 187 aa1.77□□□□□ -2.13
SLC44A1-201ENST00000374720 MUC5ACP98088 5654 aa1.71□□□□□ -2.14
SLC44A1-201ENST00000374720 KRTAP5-10Q6L8G5 202 aa1.69□□□□□ -2.14
SLC44A1-201ENST00000374720 KRTAP5-2Q701N4 177 aa1.67□□□□□ -2.14
SLC44A1-201ENST00000374720 HMCN1Q96RW7 5635 aa1.55□□□□□ -2.16
SLC44A1-201ENST00000374720 MUC5BQ9HC84 5762 aaPredicted RBP1.53□□□□□ -2.16
SLC44A1-201ENST00000374720 KRTAP5-1Q6L8H4 278 aa1.53□□□□□ -2.16
SLC44A1-201ENST00000374720 KRTAP5-11Q6L8G4 156 aa1.45□□□□□ -2.18
SLC44A1-201ENST00000374720 KRTAP21-1Q3LI58 79 aa1.41□□□□□ -2.18
SLC44A1-201ENST00000374720 KRTAP21-2Q3LI59 83 aa1.36□□□□□ -2.19
SLC44A1-201ENST00000374720 AHNAK2Q8IVF2 5795 aa1.36□□□□□ -2.19
SLC44A1-201ENST00000374720 AHNAKQ09666 5890 aaKnown RBP1.31□□□□□ -2.2
SLC44A1-201ENST00000374720 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.21□□□□□ -2.22
SLC44A1-201ENST00000374720 MUC16Q8WXI7 14507 aa1.08□□□□□ -2.24
SLC44A1-201ENST00000374720 KRTAP5-7Q6L8G8 165 aa1.08□□□□□ -2.24
Retrieved 77 of 20,778 RNA–protein pairs in 108.7 ms