RNA–Protein interactions for RNA: ENST00000374270.7

SUSD1-204, Transcript of sushi domain containing 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SUSD1, Length 3,124 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUSD1-204ENST00000374270 KRTAP19-6Q3LI70 58 aa6.86□□□□□ -1.31
SUSD1-204ENST00000374270 LOC100996750A0A140TA64 210 aa6.82□□□□□ -1.32
SUSD1-204ENST00000374270 MACF1Q9UPN3 7388 aaKnown RBP6.8□□□□□ -1.32
SUSD1-204ENST00000374270 SYNE2Q8WXH0 6885 aaKnown RBP6.77□□□□□ -1.33
SUSD1-204ENST00000374270 MT1GP13640 62 aa6.72□□□□□ -1.33
SUSD1-204ENST00000374270 LCE2DQ5TA82 110 aaPredicted RBP6.7□□□□□ -1.34
SUSD1-204ENST00000374270 SPRR2FQ96RM1 72 aa6.68□□□□□ -1.34
SUSD1-204ENST00000374270 SYNE1Q8NF91 8797 aaKnown RBP6.67□□□□□ -1.34
SUSD1-204ENST00000374270 MDN1Q9NU22 5596 aa6.57□□□□□ -1.36
SUSD1-204ENST00000374270 KRTAP19-3Q7Z4W3 81 aa6.53□□□□□ -1.36
SUSD1-204ENST00000374270 MT1MQ8N339 61 aa6.52□□□□□ -1.37
SUSD1-204ENST00000374270 OBSCNQ5VST9 7968 aa6.47□□□□□ -1.37
SUSD1-204ENST00000374270 KRTAP2-3P0C7H8 128 aa6.44□□□□□ -1.38
SUSD1-204ENST00000374270 KRTAP2-4Q9BYR9 128 aa6.44□□□□□ -1.38
SUSD1-204ENST00000374270 KRTAP2-1Q9BYU5 128 aa6.44□□□□□ -1.38
SUSD1-204ENST00000374270 KRTAP9-2Q9BYQ4 174 aa6.33□□□□□ -1.4
SUSD1-204ENST00000374270 KRTAP19-4Q3LI73 84 aa6.26□□□□□ -1.41
SUSD1-204ENST00000374270 LCE5AQ5TCM9 118 aa6.25□□□□□ -1.41
SUSD1-204ENST00000374270 LCE3BQ5TA77 95 aa6.24□□□□□ -1.41
SUSD1-204ENST00000374270 KRTAP4-9Q9BYQ8 210 aa6.16□□□□□ -1.42
SUSD1-204ENST00000374270 SPRR2EP22531 72 aa6.07□□□□□ -1.44
SUSD1-204ENST00000374270 SPRR2BP35325 72 aa6.07□□□□□ -1.44
SUSD1-204ENST00000374270 SPRR2AP35326 72 aa6.07□□□□□ -1.44
SUSD1-204ENST00000374270 LCE1AQ5T7P2 110 aa6.01□□□□□ -1.45
SUSD1-204ENST00000374270 KRTAP12-4P60329 112 aa6.01□□□□□ -1.45
SUSD1-204ENST00000374270 KRTAP6-1Q3LI64 71 aa5.99□□□□□ -1.45
SUSD1-204ENST00000374270 SPRR2DP22532 72 aa5.78□□□□□ -1.48
SUSD1-204ENST00000374270 KRTAP5-9P26371 169 aa5.77□□□□□ -1.49
SUSD1-204ENST00000374270 MT1AP04731 61 aa5.73□□□□□ -1.49
SUSD1-204ENST00000374270 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.63□□□□□ -1.51
SUSD1-204ENST00000374270 LCE3DQ9BYE3 92 aa5.62□□□□□ -1.51
SUSD1-204ENST00000374270 KRTAP5-5Q701N2 237 aaPredicted RBP5.56□□□□□ -1.52
SUSD1-204ENST00000374270 LCE3EQ5T5B0 92 aa5.48□□□□□ -1.53
SUSD1-204ENST00000374270 KRTAP9-6A0A140TA67 174 aa5.46□□□□□ -1.53
SUSD1-204ENST00000374270 KRTAP9-7A8MTY7 169 aa5.45□□□□□ -1.54
SUSD1-204ENST00000374270 KRTAP6-2Q3LI66 62 aa5.45□□□□□ -1.54
SUSD1-204ENST00000374270 KRTAP6-3Q3LI67 103 aa5.43□□□□□ -1.54
SUSD1-204ENST00000374270 KRTAP9-4Q9BYQ2 154 aa5.43□□□□□ -1.54
SUSD1-204ENST00000374270 MT4P47944 62 aa5.32□□□□□ -1.56
SUSD1-204ENST00000374270 PRM1P04553 51 aa5.31□□□□□ -1.56
SUSD1-204ENST00000374270 NEBP20929 6669 aa5.28□□□□□ -1.56
SUSD1-204ENST00000374270 KRTAP2-2Q9BYT5 123 aa5.25□□□□□ -1.57
SUSD1-204ENST00000374270 MT3P25713 68 aa5.23□□□□□ -1.57
SUSD1-204ENST00000374270 KRTAP4-6Q9BYQ5 205 aa5.2□□□□□ -1.58
SUSD1-204ENST00000374270 LCE1EQ5T753 118 aa5.15□□□□□ -1.59
SUSD1-204ENST00000374270 HMCN1Q96RW7 5635 aa4.98□□□□□ -1.61
SUSD1-204ENST00000374270 KRTAP5-4Q6L8H1 288 aa4.9□□□□□ -1.62
SUSD1-204ENST00000374270 LCE1DQ5T752 114 aa4.9□□□□□ -1.63
SUSD1-204ENST00000374270 KRTAP20-2Q3LI61 65 aa4.84□□□□□ -1.63
SUSD1-204ENST00000374270 LCE4AQ5TA78 99 aa4.7□□□□□ -1.66
SUSD1-204ENST00000374270 LCE1BQ5T7P3 118 aa4.63□□□□□ -1.67
SUSD1-204ENST00000374270 MUC5ACP98088 5654 aa4.55□□□□□ -1.68
SUSD1-204ENST00000374270 KRTAP20-1Q3LI63 56 aa4.55□□□□□ -1.68
SUSD1-204ENST00000374270 KRTAP5-2Q701N4 177 aa4.53□□□□□ -1.68
SUSD1-204ENST00000374270 KRTAP5-3Q6L8H2 238 aa4.47□□□□□ -1.69
SUSD1-204ENST00000374270 LCE1FQ5T754 118 aa4.46□□□□□ -1.69
SUSD1-204ENST00000374270 MUC19Q7Z5P9 8384 aa4.29□□□□□ -1.72
SUSD1-204ENST00000374270 KRTAP4-11Q9BYQ6 195 aa4.14□□□□□ -1.75
SUSD1-204ENST00000374270 AHNAK2Q8IVF2 5795 aa4.05□□□□□ -1.76
SUSD1-204ENST00000374270 KRTAP4-2Q9BYR5 136 aa4.04□□□□□ -1.76
SUSD1-204ENST00000374270 KRTAP5-1Q6L8H4 278 aa4.01□□□□□ -1.77
SUSD1-204ENST00000374270 KRTAP5-10Q6L8G5 202 aa3.99□□□□□ -1.77
SUSD1-204ENST00000374270 MUC5BQ9HC84 5762 aaPredicted RBP3.94□□□□□ -1.78
SUSD1-204ENST00000374270 LCE1CQ5T751 118 aa3.89□□□□□ -1.79
SUSD1-204ENST00000374270 KRTAP4-4Q9BYR3 166 aa3.88□□□□□ -1.79
SUSD1-204ENST00000374270 KRTAP5-8O75690 187 aa3.82□□□□□ -1.8
SUSD1-204ENST00000374270 KRTAP4-12Q9BQ66 201 aa3.75□□□□□ -1.81
SUSD1-204ENST00000374270 KRTAP9-9Q9BYP9 154 aa3.75□□□□□ -1.81
SUSD1-204ENST00000374270 KRTAP21-2Q3LI59 83 aa3.73□□□□□ -1.81
SUSD1-204ENST00000374270 GPR98Q8WXG9 6306 aa3.64□□□□□ -1.83
SUSD1-204ENST00000374270 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.5□□□□□ -1.85
SUSD1-204ENST00000374270 KRTAP5-7Q6L8G8 165 aa3.42□□□□□ -1.86
SUSD1-204ENST00000374270 KRTAP5-11Q6L8G4 156 aa3.33□□□□□ -1.88
SUSD1-204ENST00000374270 KRTAP21-1Q3LI58 79 aa3.15□□□□□ -1.91
SUSD1-204ENST00000374270 AHNAKQ09666 5890 aaKnown RBP3□□□□□ -1.93
SUSD1-204ENST00000374270 PHGR1C9JFL3 82 aa2.94□□□□□ -1.94
SUSD1-204ENST00000374270 MUC16Q8WXI7 14507 aa1.93□□□□□ -2.1
Retrieved 77 of 20,778 RNA–protein pairs in 5.9 ms