RNA–Protein interactions for RNA: ENST00000372237.7

TMEM53-202, Transcript of transmembrane protein 53, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM53, Length 2,310 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-202ENST00000372237 KRTAP2-4Q9BYR9 128 aa6.53□□□□□ -1.36
TMEM53-202ENST00000372237 KRTAP2-1Q9BYU5 128 aa6.53□□□□□ -1.36
TMEM53-202ENST00000372237 KRTAP9-2Q9BYQ4 174 aa6.37□□□□□ -1.39
TMEM53-202ENST00000372237 KRTAP4-3Q9BYR4 195 aa6.25□□□□□ -1.41
TMEM53-202ENST00000372237 MUC12Q9UKN1 5478 aa6.24□□□□□ -1.41
TMEM53-202ENST00000372237 MACF1Q9UPN3 7388 aaKnown RBP6.24□□□□□ -1.41
TMEM53-202ENST00000372237 LOC100996750A0A140TA64 210 aa6.24□□□□□ -1.41
TMEM53-202ENST00000372237 MT1GP13640 62 aa6.19□□□□□ -1.42
TMEM53-202ENST00000372237 CRCT1Q9UGL9 99 aa6.19□□□□□ -1.42
TMEM53-202ENST00000372237 KRTAP19-3Q7Z4W3 81 aa6.19□□□□□ -1.42
TMEM53-202ENST00000372237 MT1MQ8N339 61 aa6.17□□□□□ -1.42
TMEM53-202ENST00000372237 SPRR2FQ96RM1 72 aa6.13□□□□□ -1.43
TMEM53-202ENST00000372237 SYNE2Q8WXH0 6885 aaKnown RBP6.04□□□□□ -1.44
TMEM53-202ENST00000372237 LCE5AQ5TCM9 118 aa6.01□□□□□ -1.45
TMEM53-202ENST00000372237 KRTAP5-9P26371 169 aa5.93□□□□□ -1.46
TMEM53-202ENST00000372237 DSTQ03001 7570 aaKnown RBP5.89□□□□□ -1.47
TMEM53-202ENST00000372237 MDN1Q9NU22 5596 aa5.87□□□□□ -1.47
TMEM53-202ENST00000372237 LCE1AQ5T7P2 110 aa5.82□□□□□ -1.48
TMEM53-202ENST00000372237 KRTAP12-4P60329 112 aa5.81□□□□□ -1.48
TMEM53-202ENST00000372237 LCE3BQ5TA77 95 aa5.74□□□□□ -1.49
TMEM53-202ENST00000372237 KRTAP9-6A0A140TA67 174 aa5.72□□□□□ -1.49
TMEM53-202ENST00000372237 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.72□□□□□ -1.49
TMEM53-202ENST00000372237 SPRR2EP22531 72 aa5.7□□□□□ -1.5
TMEM53-202ENST00000372237 SPRR2BP35325 72 aa5.7□□□□□ -1.5
TMEM53-202ENST00000372237 SPRR2AP35326 72 aa5.7□□□□□ -1.5
TMEM53-202ENST00000372237 KRTAP6-3Q3LI67 103 aa5.65□□□□□ -1.51
TMEM53-202ENST00000372237 KRTAP6-1Q3LI64 71 aa5.62□□□□□ -1.51
TMEM53-202ENST00000372237 KRTAP4-9Q9BYQ8 210 aa5.6□□□□□ -1.51
TMEM53-202ENST00000372237 MT1AP04731 61 aa5.57□□□□□ -1.52
TMEM53-202ENST00000372237 SYNE1Q8NF91 8797 aaKnown RBP5.54□□□□□ -1.52
TMEM53-202ENST00000372237 SPRR2DP22532 72 aa5.48□□□□□ -1.53
TMEM53-202ENST00000372237 KRTAP5-5Q701N2 237 aaPredicted RBP5.44□□□□□ -1.54
TMEM53-202ENST00000372237 LCE3DQ9BYE3 92 aa5.43□□□□□ -1.54
TMEM53-202ENST00000372237 LCE3EQ5T5B0 92 aa5.36□□□□□ -1.55
TMEM53-202ENST00000372237 KRTAP9-7A8MTY7 169 aa5.29□□□□□ -1.56
TMEM53-202ENST00000372237 NEBP20929 6669 aa5.26□□□□□ -1.57
TMEM53-202ENST00000372237 KRTAP9-4Q9BYQ2 154 aa5.23□□□□□ -1.57
TMEM53-202ENST00000372237 KRTAP4-6Q9BYQ5 205 aa5.15□□□□□ -1.59
TMEM53-202ENST00000372237 PRM1P04553 51 aa5.13□□□□□ -1.59
TMEM53-202ENST00000372237 KRTAP6-2Q3LI66 62 aa5.03□□□□□ -1.6
TMEM53-202ENST00000372237 KRTAP5-4Q6L8H1 288 aa5.02□□□□□ -1.61
TMEM53-202ENST00000372237 MT3P25713 68 aa5□□□□□ -1.61
TMEM53-202ENST00000372237 OBSCNQ5VST9 7968 aa4.91□□□□□ -1.62
TMEM53-202ENST00000372237 LCE4AQ5TA78 99 aa4.81□□□□□ -1.64
TMEM53-202ENST00000372237 MT4P47944 62 aa4.8□□□□□ -1.64
TMEM53-202ENST00000372237 KRTAP2-2Q9BYT5 123 aa4.8□□□□□ -1.64
TMEM53-202ENST00000372237 KRTAP20-2Q3LI61 65 aa4.7□□□□□ -1.66
TMEM53-202ENST00000372237 KRTAP20-1Q3LI63 56 aa4.68□□□□□ -1.66
TMEM53-202ENST00000372237 HMCN1Q96RW7 5635 aa4.66□□□□□ -1.66
TMEM53-202ENST00000372237 LCE1DQ5T752 114 aa4.64□□□□□ -1.67
TMEM53-202ENST00000372237 KRTAP5-2Q701N4 177 aa4.61□□□□□ -1.67
TMEM53-202ENST00000372237 KRTAP4-12Q9BQ66 201 aa4.57□□□□□ -1.68
TMEM53-202ENST00000372237 KRTAP5-3Q6L8H2 238 aa4.52□□□□□ -1.69
TMEM53-202ENST00000372237 KRTAP9-9Q9BYP9 154 aa4.49□□□□□ -1.69
TMEM53-202ENST00000372237 MUC5ACP98088 5654 aa4.16□□□□□ -1.74
TMEM53-202ENST00000372237 LCE1EQ5T753 118 aa4.13□□□□□ -1.75
TMEM53-202ENST00000372237 KRTAP4-2Q9BYR5 136 aa4.05□□□□□ -1.76
TMEM53-202ENST00000372237 LCE1BQ5T7P3 118 aa4.04□□□□□ -1.76
TMEM53-202ENST00000372237 KRTAP4-11Q9BYQ6 195 aa4.01□□□□□ -1.77
TMEM53-202ENST00000372237 KRTAP5-1Q6L8H4 278 aa3.97□□□□□ -1.77
TMEM53-202ENST00000372237 KRTAP5-10Q6L8G5 202 aa3.95□□□□□ -1.78
TMEM53-202ENST00000372237 AHNAK2Q8IVF2 5795 aa3.9□□□□□ -1.79
TMEM53-202ENST00000372237 LCE1CQ5T751 118 aa3.88□□□□□ -1.79
TMEM53-202ENST00000372237 KRTAP5-8O75690 187 aa3.85□□□□□ -1.79
TMEM53-202ENST00000372237 KRTAP5-7Q6L8G8 165 aa3.75□□□□□ -1.81
TMEM53-202ENST00000372237 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.64□□□□□ -1.83
TMEM53-202ENST00000372237 KRTAP21-2Q3LI59 83 aa3.62□□□□□ -1.83
TMEM53-202ENST00000372237 GPR98Q8WXG9 6306 aa3.48□□□□□ -1.85
TMEM53-202ENST00000372237 KRTAP5-11Q6L8G4 156 aa3.38□□□□□ -1.87
TMEM53-202ENST00000372237 MUC5BQ9HC84 5762 aaPredicted RBP3.38□□□□□ -1.87
TMEM53-202ENST00000372237 KRTAP4-4Q9BYR3 166 aa3.31□□□□□ -1.88
TMEM53-202ENST00000372237 KRTAP21-1Q3LI58 79 aa3.22□□□□□ -1.89
TMEM53-202ENST00000372237 LCE1FQ5T754 118 aa3.18□□□□□ -1.9
TMEM53-202ENST00000372237 MUC19Q7Z5P9 8384 aa3.13□□□□□ -1.91
TMEM53-202ENST00000372237 PHGR1C9JFL3 82 aa2.92□□□□□ -1.94
TMEM53-202ENST00000372237 AHNAKQ09666 5890 aaKnown RBP2.83□□□□□ -1.96
TMEM53-202ENST00000372237 MUC16Q8WXI7 14507 aa1.9□□□□□ -2.11
Retrieved 77 of 20,778 RNA–protein pairs in 81.1 ms