RNA–Protein interactions for RNA: ENST00000369709.3

RAP1A-202, Transcript of RAP1A, member of RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAP1A, Length 5,024 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAP1A-202ENST00000369709 KRTAP4-3Q9BYR4 195 aa3.95□□□□□ -1.78
RAP1A-202ENST00000369709 SYNE1Q8NF91 8797 aaKnown RBP3.94□□□□□ -1.78
RAP1A-202ENST00000369709 MT1EP04732 61 aa3.94□□□□□ -1.78
RAP1A-202ENST00000369709 KRTAP19-7Q3SYF9 63 aa3.9□□□□□ -1.78
RAP1A-202ENST00000369709 USH2AO75445 5202 aa3.88□□□□□ -1.79
RAP1A-202ENST00000369709 SPRR2FQ96RM1 72 aa3.88□□□□□ -1.79
RAP1A-202ENST00000369709 LCE3DQ9BYE3 92 aa3.87□□□□□ -1.79
RAP1A-202ENST00000369709 PRM1P04553 51 aa3.86□□□□□ -1.79
RAP1A-202ENST00000369709 KRTAP4-9Q9BYQ8 210 aa3.85□□□□□ -1.79
RAP1A-202ENST00000369709 DSTQ03001 7570 aaKnown RBP3.84□□□□□ -1.8
RAP1A-202ENST00000369709 LCE3EQ5T5B0 92 aa3.83□□□□□ -1.8
RAP1A-202ENST00000369709 KRTAP19-3Q7Z4W3 81 aa3.73□□□□□ -1.81
RAP1A-202ENST00000369709 MT1MQ8N339 61 aa3.72□□□□□ -1.81
RAP1A-202ENST00000369709 FCGBPQ9Y6R7 5405 aaPredicted RBP3.72□□□□□ -1.81
RAP1A-202ENST00000369709 KRTAP9-7A8MTY7 169 aa3.64□□□□□ -1.83
RAP1A-202ENST00000369709 SYNE2Q8WXH0 6885 aaKnown RBP3.58□□□□□ -1.84
RAP1A-202ENST00000369709 KRTAP9-2Q9BYQ4 174 aa3.55□□□□□ -1.84
RAP1A-202ENST00000369709 KRTAP6-2Q3LI66 62 aa3.47□□□□□ -1.85
RAP1A-202ENST00000369709 KRTAP6-1Q3LI64 71 aa3.47□□□□□ -1.85
RAP1A-202ENST00000369709 MT1AP04731 61 aa3.45□□□□□ -1.86
RAP1A-202ENST00000369709 SPRR2EP22531 72 aa3.44□□□□□ -1.86
RAP1A-202ENST00000369709 SPRR2BP35325 72 aa3.44□□□□□ -1.86
RAP1A-202ENST00000369709 SPRR2AP35326 72 aa3.44□□□□□ -1.86
RAP1A-202ENST00000369709 LCE2DQ5TA82 110 aaPredicted RBP3.43□□□□□ -1.86
RAP1A-202ENST00000369709 SSPOA2VEC9 5147 aa3.41□□□□□ -1.86
RAP1A-202ENST00000369709 MUC12Q9UKN1 5478 aa3.4□□□□□ -1.86
RAP1A-202ENST00000369709 KRTAP19-6Q3LI70 58 aa3.39□□□□□ -1.87
RAP1A-202ENST00000369709 LCE2AQ5TA79 106 aaPredicted RBP3.36□□□□□ -1.87
RAP1A-202ENST00000369709 MT3P25713 68 aa3.29□□□□□ -1.88
RAP1A-202ENST00000369709 LCE5AQ5TCM9 118 aa3.28□□□□□ -1.89
RAP1A-202ENST00000369709 SPRR2DP22532 72 aa3.27□□□□□ -1.89
RAP1A-202ENST00000369709 KRTAP9-6A0A140TA67 174 aa3.26□□□□□ -1.89
RAP1A-202ENST00000369709 LCE1AQ5T7P2 110 aa3.23□□□□□ -1.89
RAP1A-202ENST00000369709 KRTAP5-5Q701N2 237 aaPredicted RBP3.22□□□□□ -1.89
RAP1A-202ENST00000369709 KRTAP2-2Q9BYT5 123 aa3.21□□□□□ -1.89
RAP1A-202ENST00000369709 KRTAP9-4Q9BYQ2 154 aa3.15□□□□□ -1.9
RAP1A-202ENST00000369709 KRTAP6-3Q3LI67 103 aa3.14□□□□□ -1.91
RAP1A-202ENST00000369709 MACF1Q9UPN3 7388 aaKnown RBP3.13□□□□□ -1.91
RAP1A-202ENST00000369709 LCE1EQ5T753 118 aa3.05□□□□□ -1.92
RAP1A-202ENST00000369709 LCE1DQ5T752 114 aa3.04□□□□□ -1.92
RAP1A-202ENST00000369709 MT4P47944 62 aa3.03□□□□□ -1.92
RAP1A-202ENST00000369709 LCE1BQ5T7P3 118 aa3.03□□□□□ -1.92
RAP1A-202ENST00000369709 MDN1Q9NU22 5596 aa2.94□□□□□ -1.94
RAP1A-202ENST00000369709 MUC19Q7Z5P9 8384 aa2.92□□□□□ -1.94
RAP1A-202ENST00000369709 KRTAP4-11Q9BYQ6 195 aa2.91□□□□□ -1.94
RAP1A-202ENST00000369709 KRTAP4-6Q9BYQ5 205 aa2.61□□□□□ -1.99
RAP1A-202ENST00000369709 KRTAP5-9P26371 169 aa2.56□□□□□ -2
RAP1A-202ENST00000369709 KRTAP20-2Q3LI61 65 aa2.44□□□□□ -2.02
RAP1A-202ENST00000369709 LCE4AQ5TA78 99 aa2.44□□□□□ -2.02
RAP1A-202ENST00000369709 KRTAP4-4Q9BYR3 166 aa2.44□□□□□ -2.02
RAP1A-202ENST00000369709 LCE1FQ5T754 118 aa2.42□□□□□ -2.02
RAP1A-202ENST00000369709 MUC5ACP98088 5654 aa2.41□□□□□ -2.02
RAP1A-202ENST00000369709 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.37□□□□□ -2.03
RAP1A-202ENST00000369709 KRTAP5-4Q6L8H1 288 aa2.37□□□□□ -2.03
RAP1A-202ENST00000369709 NEBP20929 6669 aa2.33□□□□□ -2.04
RAP1A-202ENST00000369709 KRTAP5-10Q6L8G5 202 aa2.32□□□□□ -2.04
RAP1A-202ENST00000369709 LCE1CQ5T751 118 aa2.24□□□□□ -2.05
RAP1A-202ENST00000369709 HMCN1Q96RW7 5635 aa2.24□□□□□ -2.05
RAP1A-202ENST00000369709 KRTAP20-1Q3LI63 56 aa2.19□□□□□ -2.06
RAP1A-202ENST00000369709 KRTAP4-12Q9BQ66 201 aa2.17□□□□□ -2.06
RAP1A-202ENST00000369709 KRTAP4-2Q9BYR5 136 aa2.17□□□□□ -2.06
RAP1A-202ENST00000369709 KRTAP5-2Q701N4 177 aa2.1□□□□□ -2.07
RAP1A-202ENST00000369709 KRTAP5-3Q6L8H2 238 aa2.07□□□□□ -2.08
RAP1A-202ENST00000369709 KRTAP21-1Q3LI58 79 aa2.01□□□□□ -2.09
RAP1A-202ENST00000369709 GPR98Q8WXG9 6306 aa2□□□□□ -2.09
RAP1A-202ENST00000369709 KRTAP5-1Q6L8H4 278 aa1.98□□□□□ -2.09
RAP1A-202ENST00000369709 MUC5BQ9HC84 5762 aaPredicted RBP1.96□□□□□ -2.1
RAP1A-202ENST00000369709 KRTAP21-2Q3LI59 83 aa1.95□□□□□ -2.1
RAP1A-202ENST00000369709 KRTAP9-9Q9BYP9 154 aa1.86□□□□□ -2.11
RAP1A-202ENST00000369709 AHNAK2Q8IVF2 5795 aa1.85□□□□□ -2.11
RAP1A-202ENST00000369709 KRTAP5-8O75690 187 aa1.69□□□□□ -2.14
RAP1A-202ENST00000369709 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.68□□□□□ -2.14
RAP1A-202ENST00000369709 KRTAP5-11Q6L8G4 156 aa1.67□□□□□ -2.14
RAP1A-202ENST00000369709 KRTAP5-7Q6L8G8 165 aa1.56□□□□□ -2.16
RAP1A-202ENST00000369709 AHNAKQ09666 5890 aaKnown RBP1.52□□□□□ -2.17
RAP1A-202ENST00000369709 PHGR1C9JFL3 82 aa1.47□□□□□ -2.17
RAP1A-202ENST00000369709 MUC16Q8WXI7 14507 aa1.14□□□□□ -2.23
Retrieved 77 of 20,778 RNA–protein pairs in 82.5 ms