RNA–Protein interactions for RNA: ENST00000368311.5

SSR2-202, Transcript of signal sequence receptor subunit 2, humanhuman

TSL 1 (best)

Gene SSR2, Length 5,166 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR2-202ENST00000368311 KRTAP2-1Q9BYU5 128 aa2.89□□□□□ -1.95
SSR2-202ENST00000368311 LCE4AQ5TA78 99 aa2.88□□□□□ -1.95
SSR2-202ENST00000368311 MT1LQ93083 61 aa2.84□□□□□ -1.95
SSR2-202ENST00000368311 EPPK1P58107 5090 aaKnown RBP2.84□□□□□ -1.95
SSR2-202ENST00000368311 MT1EP04732 61 aa2.83□□□□□ -1.96
SSR2-202ENST00000368311 FLGP20930 4061 aaPredicted RBP2.82□□□□□ -1.96
SSR2-202ENST00000368311 MT1MQ8N339 61 aa2.78□□□□□ -1.96
SSR2-202ENST00000368311 MT3P25713 68 aa2.74□□□□□ -1.97
SSR2-202ENST00000368311 HMCN2Q8NDA2 5059 aa2.72□□□□□ -1.97
SSR2-202ENST00000368311 RNF213Q63HN8 5207 aa2.71□□□□□ -1.98
SSR2-202ENST00000368311 KRTAP4-8A0A0G2JLE6 195 aa2.7□□□□□ -1.98
SSR2-202ENST00000368311 KRTAP4-8Q9BYQ9 185 aa2.7□□□□□ -1.98
SSR2-202ENST00000368311 FAT4Q6V0I7 4981 aa2.69□□□□□ -1.98
SSR2-202ENST00000368311 MT4P47944 62 aa2.66□□□□□ -1.98
SSR2-202ENST00000368311 KRTAP5-9P26371 169 aa2.64□□□□□ -1.99
SSR2-202ENST00000368311 MT1AP04731 61 aa2.62□□□□□ -1.99
SSR2-202ENST00000368311 LPAP08519 4548 aa2.61□□□□□ -1.99
SSR2-202ENST00000368311 UBR4Q5T4S7 5183 aa2.59□□□□□ -2
SSR2-202ENST00000368311 LCE5AQ5TCM9 118 aa2.56□□□□□ -2
SSR2-202ENST00000368311 LCE3DQ9BYE3 92 aa2.56□□□□□ -2
SSR2-202ENST00000368311 KRTAP19-7Q3SYF9 63 aa2.53□□□□□ -2
SSR2-202ENST00000368311 NEBP20929 6669 aa2.52□□□□□ -2.01
SSR2-202ENST00000368311 LCE3EQ5T5B0 92 aa2.52□□□□□ -2.01
SSR2-202ENST00000368311 SYNE2Q8WXH0 6885 aaKnown RBP2.49□□□□□ -2.01
SSR2-202ENST00000368311 FSIP2Q5CZC0 6907 aa2.44□□□□□ -2.02
SSR2-202ENST00000368311 SSPOA2VEC9 5147 aa2.44□□□□□ -2.02
SSR2-202ENST00000368311 KRTAP9-4Q9BYQ2 154 aa2.43□□□□□ -2.02
SSR2-202ENST00000368311 KRTAP9-9Q9BYP9 154 aa2.41□□□□□ -2.02
SSR2-202ENST00000368311 LCE1DQ5T752 114 aa2.36□□□□□ -2.03
SSR2-202ENST00000368311 KRTAP4-9Q9BYQ8 210 aa2.32□□□□□ -2.04
SSR2-202ENST00000368311 LCE1BQ5T7P3 118 aa2.31□□□□□ -2.04
SSR2-202ENST00000368311 KRTAP5-4Q6L8H1 288 aa2.3□□□□□ -2.04
SSR2-202ENST00000368311 KRTAP4-7Q9BYR0 210 aa2.3□□□□□ -2.04
SSR2-202ENST00000368311 LCE1FQ5T754 118 aa2.26□□□□□ -2.05
SSR2-202ENST00000368311 KRTAP4-3Q9BYR4 195 aa2.26□□□□□ -2.05
SSR2-202ENST00000368311 USH2AO75445 5202 aa2.24□□□□□ -2.05
SSR2-202ENST00000368311 KRTAP6-2Q3LI66 62 aa2.23□□□□□ -2.05
SSR2-202ENST00000368311 LCE1EQ5T753 118 aa2.23□□□□□ -2.05
SSR2-202ENST00000368311 SYNE1Q8NF91 8797 aaKnown RBP2.23□□□□□ -2.05
SSR2-202ENST00000368311 LOC100996750A0A140TA64 210 aa2.21□□□□□ -2.05
SSR2-202ENST00000368311 KRTAP6-1Q3LI64 71 aa2.21□□□□□ -2.06
SSR2-202ENST00000368311 KRTAP20-2Q3LI61 65 aa2.2□□□□□ -2.06
SSR2-202ENST00000368311 PRM1P04553 51 aa2.18□□□□□ -2.06
SSR2-202ENST00000368311 OBSCNQ5VST9 7968 aa2.16□□□□□ -2.06
SSR2-202ENST00000368311 GPR98Q8WXG9 6306 aa2.14□□□□□ -2.07
SSR2-202ENST00000368311 MUC2Q02817 5179 aa2.11□□□□□ -2.07
SSR2-202ENST00000368311 DSTQ03001 7570 aaKnown RBP2.07□□□□□ -2.08
SSR2-202ENST00000368311 LCE1CQ5T751 118 aa2.06□□□□□ -2.08
SSR2-202ENST00000368311 MACF1Q9UPN3 7388 aaKnown RBP2.04□□□□□ -2.08
SSR2-202ENST00000368311 FCGBPQ9Y6R7 5405 aaPredicted RBP2.03□□□□□ -2.08
SSR2-202ENST00000368311 KRTAP4-11Q9BYQ6 195 aa2.01□□□□□ -2.09
SSR2-202ENST00000368311 KRTAP4-6Q9BYQ5 205 aa2.01□□□□□ -2.09
SSR2-202ENST00000368311 KRTAP5-3Q6L8H2 238 aa1.99□□□□□ -2.09
SSR2-202ENST00000368311 KRTAP5-5Q701N2 237 aaPredicted RBP1.94□□□□□ -2.1
SSR2-202ENST00000368311 HMCN1Q96RW7 5635 aa1.92□□□□□ -2.1
SSR2-202ENST00000368311 KMT2DO14686 5537 aa1.91□□□□□ -2.1
SSR2-202ENST00000368311 MDN1Q9NU22 5596 aa1.91□□□□□ -2.1
SSR2-202ENST00000368311 KRTAP9-6A8MVA2 160 aa1.89□□□□□ -2.11
SSR2-202ENST00000368311 AHNAK2Q8IVF2 5795 aa1.87□□□□□ -2.11
SSR2-202ENST00000368311 KRTAP4-12Q9BQ66 201 aa1.81□□□□□ -2.12
SSR2-202ENST00000368311 MUC5ACP98088 5654 aa1.81□□□□□ -2.12
SSR2-202ENST00000368311 KRTAP5-7Q6L8G8 165 aa1.79□□□□□ -2.12
SSR2-202ENST00000368311 KRTAP5-2Q701N4 177 aa1.77□□□□□ -2.13
SSR2-202ENST00000368311 AHNAKQ09666 5890 aaKnown RBP1.76□□□□□ -2.13
SSR2-202ENST00000368311 KRTAP5-8O75690 187 aa1.73□□□□□ -2.13
SSR2-202ENST00000368311 KRTAP5-10Q6L8G5 202 aa1.67□□□□□ -2.14
SSR2-202ENST00000368311 MUC19Q7Z5P9 8384 aa1.66□□□□□ -2.14
SSR2-202ENST00000368311 MUC12Q9UKN1 5478 aa1.65□□□□□ -2.15
SSR2-202ENST00000368311 KRTAP4-2Q9BYR5 136 aa1.6□□□□□ -2.15
SSR2-202ENST00000368311 MUC5BQ9HC84 5762 aaPredicted RBP1.59□□□□□ -2.16
SSR2-202ENST00000368311 KRTAP5-11Q6L8G4 156 aa1.55□□□□□ -2.16
SSR2-202ENST00000368311 KRTAP5-1Q6L8H4 278 aa1.53□□□□□ -2.16
SSR2-202ENST00000368311 PHGR1C9JFL3 82 aa1.52□□□□□ -2.17
SSR2-202ENST00000368311 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.44□□□□□ -2.18
SSR2-202ENST00000368311 KRTAP4-4Q9BYR3 166 aa1.37□□□□□ -2.19
SSR2-202ENST00000368311 KRTAP21-1Q3LI58 79 aa1.3□□□□□ -2.2
SSR2-202ENST00000368311 KRTAP21-2Q3LI59 83 aa1.3□□□□□ -2.2
SSR2-202ENST00000368311 MUC16Q8WXI7 14507 aa0.93□□□□□ -2.26
Retrieved 78 of 20,778 RNA–protein pairs in 74.7 ms