RNA–Protein interactions for RNA: ENST00000368300.8

LMNA-206, Transcript of lamin A/C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMNA, Length 3,190 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-206ENST00000368300 MT1LQ93083 61 aa4.31□□□□□ -1.72
LMNA-206ENST00000368300 KRTAP4-3Q9BYR4 195 aa4.2□□□□□ -1.74
LMNA-206ENST00000368300 MACF1Q9UPN3 7388 aaKnown RBP4.19□□□□□ -1.74
LMNA-206ENST00000368300 DSTQ03001 7570 aaKnown RBP4.13□□□□□ -1.75
LMNA-206ENST00000368300 SPRR2FQ96RM1 72 aa4.12□□□□□ -1.75
LMNA-206ENST00000368300 KRTAP9-2Q9BYQ4 174 aa4.11□□□□□ -1.75
LMNA-206ENST00000368300 SYNE2Q8WXH0 6885 aaKnown RBP4.1□□□□□ -1.75
LMNA-206ENST00000368300 KRTAP19-3Q7Z4W3 81 aa4.1□□□□□ -1.75
LMNA-206ENST00000368300 MT1MQ8N339 61 aa4.08□□□□□ -1.76
LMNA-206ENST00000368300 MT1GP13640 62 aa4.07□□□□□ -1.76
LMNA-206ENST00000368300 KRTAP19-4Q3LI73 84 aa4.07□□□□□ -1.76
LMNA-206ENST00000368300 CRCT1Q9UGL9 99 aa4.04□□□□□ -1.76
LMNA-206ENST00000368300 MDN1Q9NU22 5596 aa4□□□□□ -1.77
LMNA-206ENST00000368300 KRTAP2-3P0C7H8 128 aa4□□□□□ -1.77
LMNA-206ENST00000368300 KRTAP2-4Q9BYR9 128 aa4□□□□□ -1.77
LMNA-206ENST00000368300 KRTAP2-1Q9BYU5 128 aa4□□□□□ -1.77
LMNA-206ENST00000368300 LCE5AQ5TCM9 118 aa3.98□□□□□ -1.77
LMNA-206ENST00000368300 KRTAP9-6A0A140TA67 174 aa3.89□□□□□ -1.79
LMNA-206ENST00000368300 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.88□□□□□ -1.79
LMNA-206ENST00000368300 OBSCNQ5VST9 7968 aa3.86□□□□□ -1.79
LMNA-206ENST00000368300 KRTAP12-4P60329 112 aa3.86□□□□□ -1.79
LMNA-206ENST00000368300 LCE1AQ5T7P2 110 aa3.84□□□□□ -1.79
LMNA-206ENST00000368300 KRTAP5-9P26371 169 aa3.81□□□□□ -1.8
LMNA-206ENST00000368300 LCE3BQ5TA77 95 aa3.81□□□□□ -1.8
LMNA-206ENST00000368300 SYNE1Q8NF91 8797 aaKnown RBP3.8□□□□□ -1.8
LMNA-206ENST00000368300 SPRR2EP22531 72 aa3.79□□□□□ -1.8
LMNA-206ENST00000368300 SPRR2BP35325 72 aa3.79□□□□□ -1.8
LMNA-206ENST00000368300 SPRR2AP35326 72 aa3.79□□□□□ -1.8
LMNA-206ENST00000368300 KRTAP5-3Q6L8H2 238 aa3.79□□□□□ -1.8
LMNA-206ENST00000368300 KRTAP9-9Q9BYP9 154 aa3.71□□□□□ -1.82
LMNA-206ENST00000368300 KRTAP9-4Q9BYQ2 154 aa3.71□□□□□ -1.82
LMNA-206ENST00000368300 KRTAP6-1Q3LI64 71 aa3.69□□□□□ -1.82
LMNA-206ENST00000368300 KRTAP4-9Q9BYQ8 210 aa3.67□□□□□ -1.82
LMNA-206ENST00000368300 LCE1DQ5T752 114 aa3.66□□□□□ -1.82
LMNA-206ENST00000368300 KRTAP4-12Q9BQ66 201 aa3.64□□□□□ -1.83
LMNA-206ENST00000368300 KRTAP4-2Q9BYR5 136 aa3.63□□□□□ -1.83
LMNA-206ENST00000368300 SPRR2DP22532 72 aa3.63□□□□□ -1.83
LMNA-206ENST00000368300 MT1AP04731 61 aa3.6□□□□□ -1.83
LMNA-206ENST00000368300 KRTAP6-3Q3LI67 103 aa3.6□□□□□ -1.83
LMNA-206ENST00000368300 KRTAP5-5Q701N2 237 aaPredicted RBP3.59□□□□□ -1.83
LMNA-206ENST00000368300 PRM1P04553 51 aa3.51□□□□□ -1.85
LMNA-206ENST00000368300 KRTAP9-7A8MTY7 169 aa3.51□□□□□ -1.85
LMNA-206ENST00000368300 LCE1EQ5T753 118 aa3.43□□□□□ -1.86
LMNA-206ENST00000368300 KRTAP2-2Q9BYT5 123 aa3.43□□□□□ -1.86
LMNA-206ENST00000368300 NEBP20929 6669 aa3.42□□□□□ -1.86
LMNA-206ENST00000368300 LCE3DQ9BYE3 92 aa3.39□□□□□ -1.87
LMNA-206ENST00000368300 KRTAP6-2Q3LI66 62 aa3.35□□□□□ -1.87
LMNA-206ENST00000368300 KRTAP4-11Q9BYQ6 195 aa3.35□□□□□ -1.87
LMNA-206ENST00000368300 LCE1FQ5T754 118 aa3.33□□□□□ -1.88
LMNA-206ENST00000368300 LCE3EQ5T5B0 92 aa3.31□□□□□ -1.88
LMNA-206ENST00000368300 MT3P25713 68 aa3.25□□□□□ -1.89
LMNA-206ENST00000368300 MT4P47944 62 aa3.25□□□□□ -1.89
LMNA-206ENST00000368300 KRTAP5-4Q6L8H1 288 aa3.25□□□□□ -1.89
LMNA-206ENST00000368300 MUC19Q7Z5P9 8384 aa3.16□□□□□ -1.9
LMNA-206ENST00000368300 HMCN1Q96RW7 5635 aa3.1□□□□□ -1.91
LMNA-206ENST00000368300 KRTAP20-2Q3LI61 65 aa3.1□□□□□ -1.91
LMNA-206ENST00000368300 LCE4AQ5TA78 99 aa3.08□□□□□ -1.92
LMNA-206ENST00000368300 KRTAP5-2Q701N4 177 aa2.99□□□□□ -1.93
LMNA-206ENST00000368300 KRTAP20-1Q3LI63 56 aa2.98□□□□□ -1.93
LMNA-206ENST00000368300 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.82□□□□□ -1.96
LMNA-206ENST00000368300 MUC5ACP98088 5654 aa2.77□□□□□ -1.97
LMNA-206ENST00000368300 LCE1BQ5T7P3 118 aa2.74□□□□□ -1.97
LMNA-206ENST00000368300 KRTAP5-1Q6L8H4 278 aa2.61□□□□□ -1.99
LMNA-206ENST00000368300 KRTAP5-10Q6L8G5 202 aa2.55□□□□□ -2
LMNA-206ENST00000368300 LCE1CQ5T751 118 aa2.53□□□□□ -2.01
LMNA-206ENST00000368300 AHNAK2Q8IVF2 5795 aa2.52□□□□□ -2.01
LMNA-206ENST00000368300 KRTAP5-8O75690 187 aa2.5□□□□□ -2.01
LMNA-206ENST00000368300 GPR98Q8WXG9 6306 aa2.39□□□□□ -2.03
LMNA-206ENST00000368300 KRTAP21-2Q3LI59 83 aa2.37□□□□□ -2.03
LMNA-206ENST00000368300 KRTAP5-7Q6L8G8 165 aa2.36□□□□□ -2.03
LMNA-206ENST00000368300 MUC5BQ9HC84 5762 aaPredicted RBP2.34□□□□□ -2.04
LMNA-206ENST00000368300 KRTAP4-4Q9BYR3 166 aa2.26□□□□□ -2.05
LMNA-206ENST00000368300 KRTAP5-11Q6L8G4 156 aa2.18□□□□□ -2.06
LMNA-206ENST00000368300 KRTAP21-1Q3LI58 79 aa2.01□□□□□ -2.09
LMNA-206ENST00000368300 AHNAKQ09666 5890 aaKnown RBP1.94□□□□□ -2.1
LMNA-206ENST00000368300 PHGR1C9JFL3 82 aa1.91□□□□□ -2.1
LMNA-206ENST00000368300 MUC16Q8WXI7 14507 aa1.21□□□□□ -2.22
Retrieved 77 of 20,778 RNA–protein pairs in 72.8 ms