RNA–Protein interactions for RNA: ENST00000368207.7

PTPRK-203, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5 BASIC

Gene PTPRK, Length 4,758 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-203ENST00000368207 SPRR2DP22532 72 aa4.14□□□□□ -1.75
PTPRK-203ENST00000368207 KRTAP19-6Q3LI70 58 aa4.12□□□□□ -1.75
PTPRK-203ENST00000368207 MT1LQ93083 61 aa4.11□□□□□ -1.75
PTPRK-203ENST00000368207 MT1EP04732 61 aa4.11□□□□□ -1.75
PTPRK-203ENST00000368207 KRTAP19-3Q7Z4W3 81 aa4.1□□□□□ -1.75
PTPRK-203ENST00000368207 KRTAP12-4P60329 112 aa4.02□□□□□ -1.77
PTPRK-203ENST00000368207 MT1MQ8N339 61 aa3.95□□□□□ -1.78
PTPRK-203ENST00000368207 KRTAP4-3Q9BYR4 195 aa3.95□□□□□ -1.78
PTPRK-203ENST00000368207 KRTAP19-7Q3SYF9 63 aa3.93□□□□□ -1.78
PTPRK-203ENST00000368207 KRTAP9-7A8MTY7 169 aa3.92□□□□□ -1.78
PTPRK-203ENST00000368207 LOC100996750A0A140TA64 210 aa3.91□□□□□ -1.78
PTPRK-203ENST00000368207 LCE3DQ9BYE3 92 aa3.89□□□□□ -1.79
PTPRK-203ENST00000368207 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.87□□□□□ -1.79
PTPRK-203ENST00000368207 USH2AO75445 5202 aa3.86□□□□□ -1.79
PTPRK-203ENST00000368207 OBSCNQ5VST9 7968 aa3.85□□□□□ -1.79
PTPRK-203ENST00000368207 KRTAP6-3Q3LI67 103 aa3.82□□□□□ -1.8
PTPRK-203ENST00000368207 LCE3EQ5T5B0 92 aa3.81□□□□□ -1.8
PTPRK-203ENST00000368207 FCGBPQ9Y6R7 5405 aaPredicted RBP3.74□□□□□ -1.81
PTPRK-203ENST00000368207 SYNE2Q8WXH0 6885 aaKnown RBP3.74□□□□□ -1.81
PTPRK-203ENST00000368207 MT4P47944 62 aa3.73□□□□□ -1.81
PTPRK-203ENST00000368207 DSTQ03001 7570 aaKnown RBP3.73□□□□□ -1.81
PTPRK-203ENST00000368207 MT3P25713 68 aa3.67□□□□□ -1.82
PTPRK-203ENST00000368207 KRTAP20-1Q3LI63 56 aa3.66□□□□□ -1.82
PTPRK-203ENST00000368207 KMT2DO14686 5537 aa3.65□□□□□ -1.83
PTPRK-203ENST00000368207 KRTAP9-6A8MVA2 160 aa3.64□□□□□ -1.83
PTPRK-203ENST00000368207 LCE1AQ5T7P2 110 aa3.61□□□□□ -1.83
PTPRK-203ENST00000368207 MT1AP04731 61 aa3.6□□□□□ -1.83
PTPRK-203ENST00000368207 KRTAP4-9Q9BYQ8 210 aa3.6□□□□□ -1.83
PTPRK-203ENST00000368207 KRTAP2-3P0C7H8 128 aa3.58□□□□□ -1.84
PTPRK-203ENST00000368207 KRTAP2-4Q9BYR9 128 aa3.58□□□□□ -1.84
PTPRK-203ENST00000368207 KRTAP2-1Q9BYU5 128 aa3.56□□□□□ -1.84
PTPRK-203ENST00000368207 LCE5AQ5TCM9 118 aa3.55□□□□□ -1.84
PTPRK-203ENST00000368207 SSPOA2VEC9 5147 aa3.54□□□□□ -1.84
PTPRK-203ENST00000368207 PRM1P04553 51 aa3.5□□□□□ -1.85
PTPRK-203ENST00000368207 KRTAP6-1Q3LI64 71 aa3.49□□□□□ -1.85
PTPRK-203ENST00000368207 MUC12Q9UKN1 5478 aa3.49□□□□□ -1.85
PTPRK-203ENST00000368207 LCE1DQ5T752 114 aa3.48□□□□□ -1.85
PTPRK-203ENST00000368207 KRTAP2-2Q9BYT5 123 aa3.47□□□□□ -1.85
PTPRK-203ENST00000368207 LCE1BQ5T7P3 118 aa3.47□□□□□ -1.85
PTPRK-203ENST00000368207 MACF1Q9UPN3 7388 aaKnown RBP3.47□□□□□ -1.85
PTPRK-203ENST00000368207 KRTAP5-9P26371 169 aa3.44□□□□□ -1.86
PTPRK-203ENST00000368207 KRTAP6-2Q3LI66 62 aa3.38□□□□□ -1.87
PTPRK-203ENST00000368207 NEBP20929 6669 aa3.34□□□□□ -1.87
PTPRK-203ENST00000368207 KRTAP9-4Q9BYQ2 154 aa3.32□□□□□ -1.88
PTPRK-203ENST00000368207 LCE4AQ5TA78 99 aa3.3□□□□□ -1.88
PTPRK-203ENST00000368207 MDN1Q9NU22 5596 aa3.24□□□□□ -1.89
PTPRK-203ENST00000368207 KRTAP4-6Q9BYQ5 205 aa3□□□□□ -1.93
PTPRK-203ENST00000368207 MUC19Q7Z5P9 8384 aa2.97□□□□□ -1.93
PTPRK-203ENST00000368207 GPR98Q8WXG9 6306 aa2.91□□□□□ -1.94
PTPRK-203ENST00000368207 KRTAP20-2Q3LI61 65 aa2.89□□□□□ -1.95
PTPRK-203ENST00000368207 LCE1CQ5T751 118 aa2.83□□□□□ -1.96
PTPRK-203ENST00000368207 LCE1EQ5T753 118 aa2.83□□□□□ -1.96
PTPRK-203ENST00000368207 LCE1FQ5T754 118 aa2.83□□□□□ -1.96
PTPRK-203ENST00000368207 KRTAP5-4Q6L8H1 288 aa2.79□□□□□ -1.96
PTPRK-203ENST00000368207 KRTAP5-5Q701N2 237 aaPredicted RBP2.72□□□□□ -1.97
PTPRK-203ENST00000368207 KRTAP9-9Q9BYP9 154 aa2.72□□□□□ -1.97
PTPRK-203ENST00000368207 MUC5ACP98088 5654 aa2.65□□□□□ -1.99
PTPRK-203ENST00000368207 KRTAP4-11Q9BYQ6 195 aa2.64□□□□□ -1.99
PTPRK-203ENST00000368207 KRTAP5-3Q6L8H2 238 aa2.61□□□□□ -1.99
PTPRK-203ENST00000368207 HMCN1Q96RW7 5635 aa2.55□□□□□ -2
PTPRK-203ENST00000368207 KRTAP4-4Q9BYR3 166 aa2.53□□□□□ -2
PTPRK-203ENST00000368207 KRTAP4-12Q9BQ66 201 aa2.52□□□□□ -2.01
PTPRK-203ENST00000368207 KRTAP4-2Q9BYR5 136 aa2.52□□□□□ -2.01
PTPRK-203ENST00000368207 AHNAK2Q8IVF2 5795 aa2.46□□□□□ -2.02
PTPRK-203ENST00000368207 KRTAP5-2Q701N4 177 aa2.38□□□□□ -2.03
PTPRK-203ENST00000368207 KRTAP5-8O75690 187 aa2.32□□□□□ -2.04
PTPRK-203ENST00000368207 KRTAP5-10Q6L8G5 202 aa2.26□□□□□ -2.05
PTPRK-203ENST00000368207 KRTAP5-7Q6L8G8 165 aa2.22□□□□□ -2.05
PTPRK-203ENST00000368207 AHNAKQ09666 5890 aaKnown RBP2.19□□□□□ -2.06
PTPRK-203ENST00000368207 KRTAP5-1Q6L8H4 278 aa2.1□□□□□ -2.07
PTPRK-203ENST00000368207 MUC5BQ9HC84 5762 aaPredicted RBP2□□□□□ -2.09
PTPRK-203ENST00000368207 KRTAP5-11Q6L8G4 156 aa1.93□□□□□ -2.1
PTPRK-203ENST00000368207 KRTAP21-2Q3LI59 83 aa1.88□□□□□ -2.11
PTPRK-203ENST00000368207 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.82□□□□□ -2.12
PTPRK-203ENST00000368207 PHGR1C9JFL3 82 aa1.8□□□□□ -2.12
PTPRK-203ENST00000368207 KRTAP21-1Q3LI58 79 aa1.54□□□□□ -2.16
PTPRK-203ENST00000368207 MUC16Q8WXI7 14507 aa1.15□□□□□ -2.23
Retrieved 77 of 20,778 RNA–protein pairs in 5.9 ms