RNA–Protein interactions for RNA: ENST00000367975.6

SDHC-202, Transcript of succinate dehydrogenase complex subunit C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDHC, Length 13,566 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHC-202ENST00000367975 KRTAP2-3P0C7H8 128 aa1.54□□□□□ -2.16
SDHC-202ENST00000367975 KRTAP2-4Q9BYR9 128 aa1.54□□□□□ -2.16
SDHC-202ENST00000367975 LCE1AQ5T7P2 110 aa1.53□□□□□ -2.16
SDHC-202ENST00000367975 HERC2O95714 4834 aa1.53□□□□□ -2.16
SDHC-202ENST00000367975 LCE1DQ5T752 114 aa1.53□□□□□ -2.17
SDHC-202ENST00000367975 KRTAP19-6Q3LI70 58 aa1.52□□□□□ -2.17
SDHC-202ENST00000367975 ABCA13Q86UQ4 5058 aa1.52□□□□□ -2.17
SDHC-202ENST00000367975 KRTAP6-3Q3LI67 103 aa1.51□□□□□ -2.17
SDHC-202ENST00000367975 KRTAP9-7A8MTY7 169 aa1.51□□□□□ -2.17
SDHC-202ENST00000367975 LCE1BQ5T7P3 118 aa1.5□□□□□ -2.17
SDHC-202ENST00000367975 KRTAP4-7Q9BYR0 210 aa1.5□□□□□ -2.17
SDHC-202ENST00000367975 LCE4AQ5TA78 99 aa1.49□□□□□ -2.17
SDHC-202ENST00000367975 KMT2DO14686 5537 aa1.49□□□□□ -2.17
SDHC-202ENST00000367975 KRTAP2-1Q9BYU5 128 aa1.48□□□□□ -2.17
SDHC-202ENST00000367975 OBSCNQ5VST9 7968 aa1.48□□□□□ -2.17
SDHC-202ENST00000367975 MT1AP04731 61 aa1.47□□□□□ -2.17
SDHC-202ENST00000367975 LOC100996750A0A140TA64 210 aa1.45□□□□□ -2.18
SDHC-202ENST00000367975 KRTAP19-2Q3LHN2 52 aa1.44□□□□□ -2.18
SDHC-202ENST00000367975 KRTAP2-2Q9BYT5 123 aa1.44□□□□□ -2.18
SDHC-202ENST00000367975 EPPK1P58107 5090 aaKnown RBP1.44□□□□□ -2.18
SDHC-202ENST00000367975 KIAA1109Q2LD37 5005 aa1.41□□□□□ -2.18
SDHC-202ENST00000367975 HMCN2Q8NDA2 5059 aa1.41□□□□□ -2.18
SDHC-202ENST00000367975 LCE5AQ5TCM9 118 aa1.4□□□□□ -2.18
SDHC-202ENST00000367975 KRTAP6-2Q3LI66 62 aa1.4□□□□□ -2.18
SDHC-202ENST00000367975 FAT4Q6V0I7 4981 aa1.4□□□□□ -2.19
SDHC-202ENST00000367975 KRTAP9-1A8MXZ3 250 aaPredicted RBP1.39□□□□□ -2.19
SDHC-202ENST00000367975 KRTAP19-7Q3SYF9 63 aa1.39□□□□□ -2.19
SDHC-202ENST00000367975 KRTAP4-3Q9BYR4 195 aa1.39□□□□□ -2.19
SDHC-202ENST00000367975 RNF213Q63HN8 5207 aa1.38□□□□□ -2.19
SDHC-202ENST00000367975 LCE2AQ5TA79 106 aaPredicted RBP1.37□□□□□ -2.19
SDHC-202ENST00000367975 KRTAP9-9Q9BYP9 154 aa1.37□□□□□ -2.19
SDHC-202ENST00000367975 GPR98Q8WXG9 6306 aa1.37□□□□□ -2.19
SDHC-202ENST00000367975 UBR4Q5T4S7 5183 aa1.36□□□□□ -2.19
SDHC-202ENST00000367975 LCE1CQ5T751 118 aa1.35□□□□□ -2.19
SDHC-202ENST00000367975 LCE1EQ5T753 118 aa1.35□□□□□ -2.19
SDHC-202ENST00000367975 LCE1FQ5T754 118 aa1.35□□□□□ -2.19
SDHC-202ENST00000367975 KRTAP4-9Q9BYQ8 210 aa1.34□□□□□ -2.19
SDHC-202ENST00000367975 SSPOA2VEC9 5147 aa1.33□□□□□ -2.2
SDHC-202ENST00000367975 MDN1Q9NU22 5596 aa1.32□□□□□ -2.2
SDHC-202ENST00000367975 KRTAP9-4Q9BYQ2 154 aa1.3□□□□□ -2.2
SDHC-202ENST00000367975 KRTAP6-1Q3LI64 71 aa1.3□□□□□ -2.2
SDHC-202ENST00000367975 KRTAP9-6A8MVA2 160 aa1.29□□□□□ -2.2
SDHC-202ENST00000367975 USH2AO75445 5202 aa1.28□□□□□ -2.2
SDHC-202ENST00000367975 DSTQ03001 7570 aaKnown RBP1.27□□□□□ -2.21
SDHC-202ENST00000367975 MUC19Q7Z5P9 8384 aa1.27□□□□□ -2.21
SDHC-202ENST00000367975 MUC5BQ9HC84 5762 aaPredicted RBP1.25□□□□□ -2.21
SDHC-202ENST00000367975 MACF1Q9UPN3 7388 aaKnown RBP1.21□□□□□ -2.22
SDHC-202ENST00000367975 SYNE2Q8WXH0 6885 aaKnown RBP1.2□□□□□ -2.22
SDHC-202ENST00000367975 KRTAP5-9P26371 169 aa1.19□□□□□ -2.22
SDHC-202ENST00000367975 FSIP2Q5CZC0 6907 aa1.18□□□□□ -2.22
SDHC-202ENST00000367975 HMCN1Q96RW7 5635 aa1.16□□□□□ -2.22
SDHC-202ENST00000367975 AHNAKQ09666 5890 aaKnown RBP1.15□□□□□ -2.23
SDHC-202ENST00000367975 AHNAK2Q8IVF2 5795 aa1.15□□□□□ -2.23
SDHC-202ENST00000367975 MUC12Q9UKN1 5478 aa1.13□□□□□ -2.23
SDHC-202ENST00000367975 KRTAP4-11Q9BYQ6 195 aa1.11□□□□□ -2.23
SDHC-202ENST00000367975 KRTAP5-4Q6L8H1 288 aa1.1□□□□□ -2.23
SDHC-202ENST00000367975 NEBP20929 6669 aa1.1□□□□□ -2.23
SDHC-202ENST00000367975 FCGBPQ9Y6R7 5405 aaPredicted RBP1.07□□□□□ -2.24
SDHC-202ENST00000367975 MUC5ACP98088 5654 aa1.07□□□□□ -2.24
SDHC-202ENST00000367975 KRTAP20-2Q3LI61 65 aa1.04□□□□□ -2.24
SDHC-202ENST00000367975 KRTAP4-6Q9BYQ5 205 aa1.03□□□□□ -2.25
SDHC-202ENST00000367975 KRTAP4-4Q9BYR3 166 aa1□□□□□ -2.25
SDHC-202ENST00000367975 KRTAP5-3Q6L8H2 238 aa0.98□□□□□ -2.25
SDHC-202ENST00000367975 KRTAP5-5Q701N2 237 aaPredicted RBP0.97□□□□□ -2.25
SDHC-202ENST00000367975 KRTAP4-12Q9BQ66 201 aa0.95□□□□□ -2.26
SDHC-202ENST00000367975 KRTAP4-2Q9BYR5 136 aa0.95□□□□□ -2.26
SDHC-202ENST00000367975 KRTAP5-7Q6L8G8 165 aa0.9□□□□□ -2.27
SDHC-202ENST00000367975 KRTAP5-8O75690 187 aa0.87□□□□□ -2.27
SDHC-202ENST00000367975 KRTAP5-2Q701N4 177 aa0.83□□□□□ -2.28
SDHC-202ENST00000367975 PHGR1C9JFL3 82 aa0.83□□□□□ -2.28
SDHC-202ENST00000367975 KRTAP5-10Q6L8G5 202 aa0.81□□□□□ -2.28
SDHC-202ENST00000367975 KRTAP5-1Q6L8H4 278 aa0.79□□□□□ -2.28
SDHC-202ENST00000367975 KRTAP5-11Q6L8G4 156 aa0.78□□□□□ -2.28
SDHC-202ENST00000367975 KRTAP5-6Q6L8G9 129 aaPredicted RBP0.77□□□□□ -2.29
SDHC-202ENST00000367975 KRTAP21-1Q3LI58 79 aa0.76□□□□□ -2.29
SDHC-202ENST00000367975 MUC16Q8WXI7 14507 aa0.72□□□□□ -2.29
SDHC-202ENST00000367975 KRTAP21-2Q3LI59 83 aa0.68□□□□□ -2.3
Retrieved 77 of 20,778 RNA–protein pairs in 93.3 ms