RNA–Protein interactions for RNA: ENST00000361367.6

CTR9-201, Transcript of CTR9 homolog, Paf1/RNA polymerase II complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTR9, Length 4,586 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9-201ENST00000361367 LCE3BQ5TA77 95 aa4.65□□□□□ -1.67
CTR9-201ENST00000361367 KRTAP12-4P60329 112 aa4.62□□□□□ -1.67
CTR9-201ENST00000361367 KRTAP4-7Q9BYR0 210 aa4.62□□□□□ -1.67
CTR9-201ENST00000361367 SPRR5A0A1B0GTR4 108 aa4.6□□□□□ -1.67
CTR9-201ENST00000361367 SYNE1Q8NF91 8797 aaKnown RBP4.55□□□□□ -1.68
CTR9-201ENST00000361367 KRTAP9-6A0A140TA67 174 aa4.55□□□□□ -1.68
CTR9-201ENST00000361367 MT1MQ8N339 61 aa4.51□□□□□ -1.69
CTR9-201ENST00000361367 KRTAP19-7Q3SYF9 63 aa4.46□□□□□ -1.7
CTR9-201ENST00000361367 KRTAP4-3Q9BYR4 195 aa4.39□□□□□ -1.71
CTR9-201ENST00000361367 LCE3DQ9BYE3 92 aa4.33□□□□□ -1.72
CTR9-201ENST00000361367 LOC100996750A0A140TA64 210 aa4.33□□□□□ -1.72
CTR9-201ENST00000361367 SYNE2Q8WXH0 6885 aaKnown RBP4.29□□□□□ -1.72
CTR9-201ENST00000361367 MT4P47944 62 aa4.28□□□□□ -1.72
CTR9-201ENST00000361367 KRTAP9-7A8MTY7 169 aa4.28□□□□□ -1.72
CTR9-201ENST00000361367 USH2AO75445 5202 aa4.27□□□□□ -1.73
CTR9-201ENST00000361367 KRTAP6-3Q3LI67 103 aa4.24□□□□□ -1.73
CTR9-201ENST00000361367 LCE3EQ5T5B0 92 aa4.24□□□□□ -1.73
CTR9-201ENST00000361367 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.22□□□□□ -1.73
CTR9-201ENST00000361367 MT3P25713 68 aa4.21□□□□□ -1.74
CTR9-201ENST00000361367 LCE1AQ5T7P2 110 aa4.19□□□□□ -1.74
CTR9-201ENST00000361367 MT1AP04731 61 aa4.13□□□□□ -1.75
CTR9-201ENST00000361367 LCE5AQ5TCM9 118 aa4.11□□□□□ -1.75
CTR9-201ENST00000361367 KRTAP20-1Q3LI63 56 aa4.1□□□□□ -1.75
CTR9-201ENST00000361367 OBSCNQ5VST9 7968 aa4.07□□□□□ -1.76
CTR9-201ENST00000361367 FCGBPQ9Y6R7 5405 aaPredicted RBP4.03□□□□□ -1.76
CTR9-201ENST00000361367 KRTAP2-3P0C7H8 128 aa4.01□□□□□ -1.77
CTR9-201ENST00000361367 KRTAP2-4Q9BYR9 128 aa4.01□□□□□ -1.77
CTR9-201ENST00000361367 DSTQ03001 7570 aaKnown RBP4.01□□□□□ -1.77
CTR9-201ENST00000361367 KRTAP9-6A8MVA2 160 aa3.99□□□□□ -1.77
CTR9-201ENST00000361367 KRTAP2-1Q9BYU5 128 aa3.99□□□□□ -1.77
CTR9-201ENST00000361367 MACF1Q9UPN3 7388 aaKnown RBP3.96□□□□□ -1.78
CTR9-201ENST00000361367 KMT2DO14686 5537 aa3.94□□□□□ -1.78
CTR9-201ENST00000361367 SSPOA2VEC9 5147 aa3.94□□□□□ -1.78
CTR9-201ENST00000361367 LCE1DQ5T752 114 aa3.93□□□□□ -1.78
CTR9-201ENST00000361367 KRTAP6-1Q3LI64 71 aa3.92□□□□□ -1.78
CTR9-201ENST00000361367 KRTAP4-9Q9BYQ8 210 aa3.91□□□□□ -1.78
CTR9-201ENST00000361367 KRTAP2-2Q9BYT5 123 aa3.91□□□□□ -1.78
CTR9-201ENST00000361367 LCE1BQ5T7P3 118 aa3.9□□□□□ -1.79
CTR9-201ENST00000361367 LCE4AQ5TA78 99 aa3.86□□□□□ -1.79
CTR9-201ENST00000361367 KRTAP6-2Q3LI66 62 aa3.82□□□□□ -1.8
CTR9-201ENST00000361367 MUC12Q9UKN1 5478 aa3.81□□□□□ -1.8
CTR9-201ENST00000361367 KRTAP9-4Q9BYQ2 154 aa3.81□□□□□ -1.8
CTR9-201ENST00000361367 KRTAP5-9P26371 169 aa3.81□□□□□ -1.8
CTR9-201ENST00000361367 PRM1P04553 51 aa3.78□□□□□ -1.8
CTR9-201ENST00000361367 NEBP20929 6669 aa3.7□□□□□ -1.82
CTR9-201ENST00000361367 MDN1Q9NU22 5596 aa3.64□□□□□ -1.83
CTR9-201ENST00000361367 KRTAP4-6Q9BYQ5 205 aa3.45□□□□□ -1.86
CTR9-201ENST00000361367 KRTAP20-2Q3LI61 65 aa3.38□□□□□ -1.87
CTR9-201ENST00000361367 GPR98Q8WXG9 6306 aa3.28□□□□□ -1.88
CTR9-201ENST00000361367 KRTAP9-9Q9BYP9 154 aa3.23□□□□□ -1.89
CTR9-201ENST00000361367 LCE1CQ5T751 118 aa3.21□□□□□ -1.9
CTR9-201ENST00000361367 LCE1EQ5T753 118 aa3.21□□□□□ -1.9
CTR9-201ENST00000361367 LCE1FQ5T754 118 aa3.21□□□□□ -1.9
CTR9-201ENST00000361367 KRTAP5-4Q6L8H1 288 aa3.17□□□□□ -1.9
CTR9-201ENST00000361367 MUC19Q7Z5P9 8384 aa3.16□□□□□ -1.9
CTR9-201ENST00000361367 KRTAP5-5Q701N2 237 aaPredicted RBP3.16□□□□□ -1.9
CTR9-201ENST00000361367 KRTAP4-11Q9BYQ6 195 aa3.04□□□□□ -1.92
CTR9-201ENST00000361367 MUC5ACP98088 5654 aa2.92□□□□□ -1.94
CTR9-201ENST00000361367 KRTAP5-3Q6L8H2 238 aa2.88□□□□□ -1.95
CTR9-201ENST00000361367 HMCN1Q96RW7 5635 aa2.83□□□□□ -1.96
CTR9-201ENST00000361367 KRTAP4-12Q9BQ66 201 aa2.83□□□□□ -1.96
CTR9-201ENST00000361367 KRTAP4-2Q9BYR5 136 aa2.83□□□□□ -1.96
CTR9-201ENST00000361367 KRTAP4-4Q9BYR3 166 aa2.77□□□□□ -1.97
CTR9-201ENST00000361367 AHNAK2Q8IVF2 5795 aa2.76□□□□□ -1.97
CTR9-201ENST00000361367 KRTAP5-2Q701N4 177 aa2.66□□□□□ -1.98
CTR9-201ENST00000361367 KRTAP5-8O75690 187 aa2.62□□□□□ -1.99
CTR9-201ENST00000361367 KRTAP5-10Q6L8G5 202 aa2.37□□□□□ -2.03
CTR9-201ENST00000361367 KRTAP5-1Q6L8H4 278 aa2.35□□□□□ -2.03
CTR9-201ENST00000361367 AHNAKQ09666 5890 aaKnown RBP2.34□□□□□ -2.04
CTR9-201ENST00000361367 MUC5BQ9HC84 5762 aaPredicted RBP2.31□□□□□ -2.04
CTR9-201ENST00000361367 KRTAP5-11Q6L8G4 156 aa2.26□□□□□ -2.05
CTR9-201ENST00000361367 KRTAP21-2Q3LI59 83 aa2.14□□□□□ -2.07
CTR9-201ENST00000361367 PHGR1C9JFL3 82 aa2.12□□□□□ -2.07
CTR9-201ENST00000361367 KRTAP5-7Q6L8G8 165 aa2.08□□□□□ -2.08
CTR9-201ENST00000361367 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.08□□□□□ -2.08
CTR9-201ENST00000361367 KRTAP21-1Q3LI58 79 aa1.72□□□□□ -2.13
CTR9-201ENST00000361367 MUC16Q8WXI7 14507 aa1.31□□□□□ -2.2
Retrieved 77 of 20,778 RNA–protein pairs in 11.9 ms