RNA–Protein interactions for RNA: ENST00000360982.2

NCKAP1-201, Transcript of NCK associated protein 1, humanhuman

TSL 1 (best) BASIC

Gene NCKAP1, Length 4,989 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1-201ENST00000360982 MT1EP04732 61 aa6.73□□□□□ -1.33
NCKAP1-201ENST00000360982 LCE2DQ5TA82 110 aaPredicted RBP6.7□□□□□ -1.34
NCKAP1-201ENST00000360982 LCE3EQ5T5B0 92 aa6.63□□□□□ -1.35
NCKAP1-201ENST00000360982 MUC2Q02817 5179 aa6.61□□□□□ -1.35
NCKAP1-201ENST00000360982 HMCN2Q8NDA2 5059 aa6.6□□□□□ -1.35
NCKAP1-201ENST00000360982 LCE2AQ5TA79 106 aaPredicted RBP6.55□□□□□ -1.36
NCKAP1-201ENST00000360982 MT1MQ8N339 61 aa6.54□□□□□ -1.36
NCKAP1-201ENST00000360982 KRTAP4-7Q9BYR0 210 aa6.54□□□□□ -1.36
NCKAP1-201ENST00000360982 MT3P25713 68 aa6.47□□□□□ -1.37
NCKAP1-201ENST00000360982 KRTAP9-6A0A140TA67 174 aa6.46□□□□□ -1.38
NCKAP1-201ENST00000360982 MT4P47944 62 aa6.38□□□□□ -1.39
NCKAP1-201ENST00000360982 PRM1P04553 51 aa6.22□□□□□ -1.41
NCKAP1-201ENST00000360982 KRTAP2-3P0C7H8 128 aa6.2□□□□□ -1.42
NCKAP1-201ENST00000360982 KRTAP2-4Q9BYR9 128 aa6.2□□□□□ -1.42
NCKAP1-201ENST00000360982 KRTAP2-1Q9BYU5 128 aa6.2□□□□□ -1.42
NCKAP1-201ENST00000360982 KRTAP19-7Q3SYF9 63 aa6.19□□□□□ -1.42
NCKAP1-201ENST00000360982 KRTAP4-3Q9BYR4 195 aa6.15□□□□□ -1.42
NCKAP1-201ENST00000360982 LOC100996750A0A140TA64 210 aa6.13□□□□□ -1.43
NCKAP1-201ENST00000360982 MT1AP04731 61 aa6.11□□□□□ -1.43
NCKAP1-201ENST00000360982 LCE1AQ5T7P2 110 aa6.11□□□□□ -1.43
NCKAP1-201ENST00000360982 KRTAP9-7A8MTY7 169 aa6.1□□□□□ -1.43
NCKAP1-201ENST00000360982 KRTAP20-1Q3LI63 56 aa6.09□□□□□ -1.43
NCKAP1-201ENST00000360982 KRTAP6-3Q3LI67 103 aa6.07□□□□□ -1.44
NCKAP1-201ENST00000360982 LCE1DQ5T752 114 aa6.06□□□□□ -1.44
NCKAP1-201ENST00000360982 LCE1BQ5T7P3 118 aa6.05□□□□□ -1.44
NCKAP1-201ENST00000360982 OBSCNQ5VST9 7968 aa5.99□□□□□ -1.45
NCKAP1-201ENST00000360982 SYNE2Q8WXH0 6885 aaKnown RBP5.96□□□□□ -1.46
NCKAP1-201ENST00000360982 KRTAP9-6A8MVA2 160 aa5.93□□□□□ -1.46
NCKAP1-201ENST00000360982 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.86□□□□□ -1.47
NCKAP1-201ENST00000360982 USH2AO75445 5202 aa5.85□□□□□ -1.47
NCKAP1-201ENST00000360982 FCGBPQ9Y6R7 5405 aaPredicted RBP5.83□□□□□ -1.48
NCKAP1-201ENST00000360982 KRTAP4-9Q9BYQ8 210 aa5.82□□□□□ -1.48
NCKAP1-201ENST00000360982 DSTQ03001 7570 aaKnown RBP5.8□□□□□ -1.48
NCKAP1-201ENST00000360982 LCE4AQ5TA78 99 aa5.76□□□□□ -1.49
NCKAP1-201ENST00000360982 KRTAP2-2Q9BYT5 123 aa5.74□□□□□ -1.49
NCKAP1-201ENST00000360982 LCE5AQ5TCM9 118 aa5.74□□□□□ -1.49
NCKAP1-201ENST00000360982 KMT2DO14686 5537 aa5.62□□□□□ -1.51
NCKAP1-201ENST00000360982 KRTAP6-1Q3LI64 71 aa5.59□□□□□ -1.51
NCKAP1-201ENST00000360982 KRTAP9-4Q9BYQ2 154 aa5.58□□□□□ -1.52
NCKAP1-201ENST00000360982 KRTAP6-2Q3LI66 62 aa5.57□□□□□ -1.52
NCKAP1-201ENST00000360982 MACF1Q9UPN3 7388 aaKnown RBP5.44□□□□□ -1.54
NCKAP1-201ENST00000360982 SSPOA2VEC9 5147 aa5.39□□□□□ -1.55
NCKAP1-201ENST00000360982 MUC12Q9UKN1 5478 aa5.38□□□□□ -1.55
NCKAP1-201ENST00000360982 LCE1CQ5T751 118 aa5.17□□□□□ -1.58
NCKAP1-201ENST00000360982 LCE1EQ5T753 118 aa5.17□□□□□ -1.58
NCKAP1-201ENST00000360982 LCE1FQ5T754 118 aa5.17□□□□□ -1.58
NCKAP1-201ENST00000360982 MDN1Q9NU22 5596 aa5.13□□□□□ -1.59
NCKAP1-201ENST00000360982 KRTAP5-9P26371 169 aa5.13□□□□□ -1.59
NCKAP1-201ENST00000360982 GPR98Q8WXG9 6306 aa5.08□□□□□ -1.6
NCKAP1-201ENST00000360982 NEBP20929 6669 aa5.08□□□□□ -1.6
NCKAP1-201ENST00000360982 KRTAP9-9Q9BYP9 154 aa5.01□□□□□ -1.61
NCKAP1-201ENST00000360982 MUC19Q7Z5P9 8384 aa4.91□□□□□ -1.62
NCKAP1-201ENST00000360982 KRTAP20-2Q3LI61 65 aa4.76□□□□□ -1.65
NCKAP1-201ENST00000360982 KRTAP4-6Q9BYQ5 205 aa4.75□□□□□ -1.65
NCKAP1-201ENST00000360982 KRTAP5-5Q701N2 237 aaPredicted RBP4.58□□□□□ -1.68
NCKAP1-201ENST00000360982 KRTAP4-11Q9BYQ6 195 aa4.58□□□□□ -1.68
NCKAP1-201ENST00000360982 KRTAP5-4Q6L8H1 288 aa4.45□□□□□ -1.7
NCKAP1-201ENST00000360982 MUC5ACP98088 5654 aa4.15□□□□□ -1.75
NCKAP1-201ENST00000360982 KRTAP4-12Q9BQ66 201 aa4.15□□□□□ -1.75
NCKAP1-201ENST00000360982 KRTAP4-2Q9BYR5 136 aa4.15□□□□□ -1.75
NCKAP1-201ENST00000360982 KRTAP4-4Q9BYR3 166 aa4.09□□□□□ -1.75
NCKAP1-201ENST00000360982 AHNAK2Q8IVF2 5795 aa4.05□□□□□ -1.76
NCKAP1-201ENST00000360982 HMCN1Q96RW7 5635 aa4.02□□□□□ -1.77
NCKAP1-201ENST00000360982 KRTAP5-3Q6L8H2 238 aa4□□□□□ -1.77
NCKAP1-201ENST00000360982 KRTAP5-8O75690 187 aa3.6□□□□□ -1.83
NCKAP1-201ENST00000360982 KRTAP5-2Q701N4 177 aa3.49□□□□□ -1.85
NCKAP1-201ENST00000360982 KRTAP5-10Q6L8G5 202 aa3.46□□□□□ -1.85
NCKAP1-201ENST00000360982 AHNAKQ09666 5890 aaKnown RBP3.32□□□□□ -1.88
NCKAP1-201ENST00000360982 MUC5BQ9HC84 5762 aaPredicted RBP3.26□□□□□ -1.89
NCKAP1-201ENST00000360982 PHGR1C9JFL3 82 aa3.24□□□□□ -1.89
NCKAP1-201ENST00000360982 KRTAP5-11Q6L8G4 156 aa3.18□□□□□ -1.9
NCKAP1-201ENST00000360982 KRTAP5-1Q6L8H4 278 aa3.12□□□□□ -1.91
NCKAP1-201ENST00000360982 KRTAP21-1Q3LI58 79 aa2.96□□□□□ -1.94
NCKAP1-201ENST00000360982 KRTAP21-2Q3LI59 83 aa2.92□□□□□ -1.94
NCKAP1-201ENST00000360982 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.79□□□□□ -1.96
NCKAP1-201ENST00000360982 KRTAP5-7Q6L8G8 165 aa2.73□□□□□ -1.97
NCKAP1-201ENST00000360982 MUC16Q8WXI7 14507 aa1.92□□□□□ -2.1
Retrieved 77 of 20,778 RNA–protein pairs in 45.4 ms