RNA–Protein interactions for RNA: ENST00000360439.8

SIN3A-201, Transcript of SIN3 transcription regulator family member A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIN3A, Length 5,050 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3A-201ENST00000360439 OBSCNQ5VST9 7968 aa3.37□□□□□ -1.87
SIN3A-201ENST00000360439 KRTAP9-7A8MTY7 169 aa3.36□□□□□ -1.87
SIN3A-201ENST00000360439 MT1GP13640 62 aa3.35□□□□□ -1.87
SIN3A-201ENST00000360439 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.3□□□□□ -1.88
SIN3A-201ENST00000360439 SYNE2Q8WXH0 6885 aaKnown RBP3.3□□□□□ -1.88
SIN3A-201ENST00000360439 KRTAP19-3Q7Z4W3 81 aa3.3□□□□□ -1.88
SIN3A-201ENST00000360439 USH2AO75445 5202 aa3.29□□□□□ -1.88
SIN3A-201ENST00000360439 MT1EP04732 61 aa3.26□□□□□ -1.89
SIN3A-201ENST00000360439 PRM1P04553 51 aa3.26□□□□□ -1.89
SIN3A-201ENST00000360439 MT1LQ93083 61 aa3.25□□□□□ -1.89
SIN3A-201ENST00000360439 KRTAP2-3P0C7H8 128 aa3.21□□□□□ -1.9
SIN3A-201ENST00000360439 KRTAP4-7Q9BYR0 210 aa3.21□□□□□ -1.9
SIN3A-201ENST00000360439 KRTAP2-4Q9BYR9 128 aa3.21□□□□□ -1.9
SIN3A-201ENST00000360439 KRTAP2-1Q9BYU5 128 aa3.21□□□□□ -1.9
SIN3A-201ENST00000360439 KRTAP6-3Q3LI67 103 aa3.21□□□□□ -1.9
SIN3A-201ENST00000360439 LCE3BQ5TA77 95 aa3.2□□□□□ -1.9
SIN3A-201ENST00000360439 LCE1AQ5T7P2 110 aa3.18□□□□□ -1.9
SIN3A-201ENST00000360439 LCE1EQ5T753 118 aa3.17□□□□□ -1.9
SIN3A-201ENST00000360439 KRTAP19-7Q3SYF9 63 aa3.16□□□□□ -1.9
SIN3A-201ENST00000360439 KRTAP20-1Q3LI63 56 aa3.15□□□□□ -1.91
SIN3A-201ENST00000360439 MT1MQ8N339 61 aa3.15□□□□□ -1.91
SIN3A-201ENST00000360439 MACF1Q9UPN3 7388 aaKnown RBP3.14□□□□□ -1.91
SIN3A-201ENST00000360439 MT4P47944 62 aa3.13□□□□□ -1.91
SIN3A-201ENST00000360439 FCGBPQ9Y6R7 5405 aaPredicted RBP3.12□□□□□ -1.91
SIN3A-201ENST00000360439 MUC19Q7Z5P9 8384 aa3.12□□□□□ -1.91
SIN3A-201ENST00000360439 SSPOA2VEC9 5147 aa3.12□□□□□ -1.91
SIN3A-201ENST00000360439 KRTAP4-3Q9BYR4 195 aa3.11□□□□□ -1.91
SIN3A-201ENST00000360439 LCE3DQ9BYE3 92 aa3.08□□□□□ -1.92
SIN3A-201ENST00000360439 LCE3EQ5T5B0 92 aa3.08□□□□□ -1.92
SIN3A-201ENST00000360439 KMT2DO14686 5537 aa3.06□□□□□ -1.92
SIN3A-201ENST00000360439 KRTAP9-6A8MVA2 160 aa3.05□□□□□ -1.92
SIN3A-201ENST00000360439 LOC100996750A0A140TA64 210 aa3.02□□□□□ -1.93
SIN3A-201ENST00000360439 DSTQ03001 7570 aaKnown RBP3.01□□□□□ -1.93
SIN3A-201ENST00000360439 KRTAP2-2Q9BYT5 123 aa2.96□□□□□ -1.94
SIN3A-201ENST00000360439 LCE1DQ5T752 114 aa2.94□□□□□ -1.94
SIN3A-201ENST00000360439 LCE5AQ5TCM9 118 aa2.94□□□□□ -1.94
SIN3A-201ENST00000360439 MT3P25713 68 aa2.93□□□□□ -1.94
SIN3A-201ENST00000360439 KRTAP4-9Q9BYQ8 210 aa2.93□□□□□ -1.94
SIN3A-201ENST00000360439 MUC12Q9UKN1 5478 aa2.92□□□□□ -1.94
SIN3A-201ENST00000360439 LCE1FQ5T754 118 aa2.9□□□□□ -1.94
SIN3A-201ENST00000360439 MT1AP04731 61 aa2.89□□□□□ -1.95
SIN3A-201ENST00000360439 NEBP20929 6669 aa2.88□□□□□ -1.95
SIN3A-201ENST00000360439 KRTAP5-9P26371 169 aa2.87□□□□□ -1.95
SIN3A-201ENST00000360439 LCE4AQ5TA78 99 aa2.8□□□□□ -1.96
SIN3A-201ENST00000360439 MDN1Q9NU22 5596 aa2.79□□□□□ -1.96
SIN3A-201ENST00000360439 KRTAP6-2Q3LI66 62 aa2.73□□□□□ -1.97
SIN3A-201ENST00000360439 KRTAP6-1Q3LI64 71 aa2.73□□□□□ -1.97
SIN3A-201ENST00000360439 LCE1BQ5T7P3 118 aa2.7□□□□□ -1.98
SIN3A-201ENST00000360439 KRTAP9-4Q9BYQ2 154 aa2.64□□□□□ -1.99
SIN3A-201ENST00000360439 KRTAP4-6Q9BYQ5 205 aa2.58□□□□□ -2
SIN3A-201ENST00000360439 GPR98Q8WXG9 6306 aa2.49□□□□□ -2.01
SIN3A-201ENST00000360439 KRTAP20-2Q3LI61 65 aa2.47□□□□□ -2.01
SIN3A-201ENST00000360439 KRTAP5-5Q701N2 237 aaPredicted RBP2.43□□□□□ -2.02
SIN3A-201ENST00000360439 KRTAP4-11Q9BYQ6 195 aa2.42□□□□□ -2.02
SIN3A-201ENST00000360439 KRTAP9-9Q9BYP9 154 aa2.37□□□□□ -2.03
SIN3A-201ENST00000360439 KRTAP5-4Q6L8H1 288 aa2.34□□□□□ -2.03
SIN3A-201ENST00000360439 LCE1CQ5T751 118 aa2.24□□□□□ -2.05
SIN3A-201ENST00000360439 KRTAP5-3Q6L8H2 238 aa2.22□□□□□ -2.05
SIN3A-201ENST00000360439 HMCN1Q96RW7 5635 aa2.22□□□□□ -2.05
SIN3A-201ENST00000360439 MUC5ACP98088 5654 aa2.16□□□□□ -2.06
SIN3A-201ENST00000360439 KRTAP4-12Q9BQ66 201 aa2.07□□□□□ -2.08
SIN3A-201ENST00000360439 KRTAP4-2Q9BYR5 136 aa2.07□□□□□ -2.08
SIN3A-201ENST00000360439 AHNAK2Q8IVF2 5795 aa2.05□□□□□ -2.08
SIN3A-201ENST00000360439 KRTAP5-8O75690 187 aa2.01□□□□□ -2.09
SIN3A-201ENST00000360439 KRTAP5-2Q701N4 177 aa2□□□□□ -2.09
SIN3A-201ENST00000360439 KRTAP4-4Q9BYR3 166 aa1.95□□□□□ -2.1
SIN3A-201ENST00000360439 KRTAP5-10Q6L8G5 202 aa1.85□□□□□ -2.11
SIN3A-201ENST00000360439 KRTAP5-1Q6L8H4 278 aa1.77□□□□□ -2.13
SIN3A-201ENST00000360439 AHNAKQ09666 5890 aaKnown RBP1.76□□□□□ -2.13
SIN3A-201ENST00000360439 KRTAP5-7Q6L8G8 165 aa1.74□□□□□ -2.13
SIN3A-201ENST00000360439 MUC5BQ9HC84 5762 aaPredicted RBP1.74□□□□□ -2.13
SIN3A-201ENST00000360439 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.69□□□□□ -2.14
SIN3A-201ENST00000360439 KRTAP21-2Q3LI59 83 aa1.63□□□□□ -2.15
SIN3A-201ENST00000360439 PHGR1C9JFL3 82 aa1.61□□□□□ -2.15
SIN3A-201ENST00000360439 KRTAP5-11Q6L8G4 156 aa1.61□□□□□ -2.15
SIN3A-201ENST00000360439 KRTAP21-1Q3LI58 79 aa1.6□□□□□ -2.15
SIN3A-201ENST00000360439 MUC16Q8WXI7 14507 aa0.96□□□□□ -2.26
Retrieved 77 of 20,778 RNA–protein pairs in 6.7 ms