RNA–Protein interactions for RNA: ENST00000360168.7

SCNN1A-203, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCNN1A, Length 3,481 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-203ENST00000360168 MT1LQ93083 61 aa4.14□□□□□ -1.75
SCNN1A-203ENST00000360168 MT1EP04732 61 aa4.11□□□□□ -1.75
SCNN1A-203ENST00000360168 KRTAP2-3P0C7H8 128 aa4.1□□□□□ -1.75
SCNN1A-203ENST00000360168 KRTAP2-4Q9BYR9 128 aa4.1□□□□□ -1.75
SCNN1A-203ENST00000360168 KRTAP2-1Q9BYU5 128 aa4.1□□□□□ -1.75
SCNN1A-203ENST00000360168 KRTAP19-6Q3LI70 58 aa4.1□□□□□ -1.75
SCNN1A-203ENST00000360168 SYNE1Q8NF91 8797 aaKnown RBP4.09□□□□□ -1.75
SCNN1A-203ENST00000360168 MT1GP13640 62 aa4.08□□□□□ -1.76
SCNN1A-203ENST00000360168 OBSCNQ5VST9 7968 aa4.01□□□□□ -1.77
SCNN1A-203ENST00000360168 KRTAP9-2Q9BYQ4 174 aa3.98□□□□□ -1.77
SCNN1A-203ENST00000360168 KRTAP12-4P60329 112 aa3.92□□□□□ -1.78
SCNN1A-203ENST00000360168 KRTAP2-2Q9BYT5 123 aa3.89□□□□□ -1.79
SCNN1A-203ENST00000360168 LCE3BQ5TA77 95 aa3.88□□□□□ -1.79
SCNN1A-203ENST00000360168 SYNE2Q8WXH0 6885 aaKnown RBP3.87□□□□□ -1.79
SCNN1A-203ENST00000360168 KRTAP4-9Q9BYQ8 210 aa3.87□□□□□ -1.79
SCNN1A-203ENST00000360168 MT1MQ8N339 61 aa3.85□□□□□ -1.79
SCNN1A-203ENST00000360168 SPRR2FQ96RM1 72 aa3.82□□□□□ -1.8
SCNN1A-203ENST00000360168 KRTAP19-3Q7Z4W3 81 aa3.81□□□□□ -1.8
SCNN1A-203ENST00000360168 LCE1AQ5T7P2 110 aa3.81□□□□□ -1.8
SCNN1A-203ENST00000360168 MACF1Q9UPN3 7388 aaKnown RBP3.8□□□□□ -1.8
SCNN1A-203ENST00000360168 LCE1EQ5T753 118 aa3.8□□□□□ -1.8
SCNN1A-203ENST00000360168 KRTAP19-4Q3LI73 84 aa3.75□□□□□ -1.81
SCNN1A-203ENST00000360168 MDN1Q9NU22 5596 aa3.69□□□□□ -1.82
SCNN1A-203ENST00000360168 KRTAP6-3Q3LI67 103 aa3.66□□□□□ -1.82
SCNN1A-203ENST00000360168 LCE5AQ5TCM9 118 aa3.66□□□□□ -1.82
SCNN1A-203ENST00000360168 LCE1FQ5T754 118 aa3.65□□□□□ -1.83
SCNN1A-203ENST00000360168 KRTAP9-6A0A140TA67 174 aa3.6□□□□□ -1.83
SCNN1A-203ENST00000360168 KRTAP6-1Q3LI64 71 aa3.6□□□□□ -1.83
SCNN1A-203ENST00000360168 LCE1DQ5T752 114 aa3.58□□□□□ -1.84
SCNN1A-203ENST00000360168 KRTAP9-7A8MTY7 169 aa3.56□□□□□ -1.84
SCNN1A-203ENST00000360168 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.55□□□□□ -1.84
SCNN1A-203ENST00000360168 SPRR2EP22531 72 aa3.54□□□□□ -1.84
SCNN1A-203ENST00000360168 SPRR2BP35325 72 aa3.54□□□□□ -1.84
SCNN1A-203ENST00000360168 SPRR2AP35326 72 aa3.54□□□□□ -1.84
SCNN1A-203ENST00000360168 LCE3DQ9BYE3 92 aa3.54□□□□□ -1.84
SCNN1A-203ENST00000360168 KRTAP9-4Q9BYQ2 154 aa3.54□□□□□ -1.84
SCNN1A-203ENST00000360168 KRTAP5-9P26371 169 aa3.53□□□□□ -1.84
SCNN1A-203ENST00000360168 PRM1P04553 51 aa3.5□□□□□ -1.85
SCNN1A-203ENST00000360168 LCE3EQ5T5B0 92 aa3.48□□□□□ -1.85
SCNN1A-203ENST00000360168 KRTAP9-9Q9BYP9 154 aa3.42□□□□□ -1.86
SCNN1A-203ENST00000360168 MT1AP04731 61 aa3.41□□□□□ -1.86
SCNN1A-203ENST00000360168 SPRR2DP22532 72 aa3.4□□□□□ -1.86
SCNN1A-203ENST00000360168 LCE4AQ5TA78 99 aa3.4□□□□□ -1.86
SCNN1A-203ENST00000360168 KRTAP5-5Q701N2 237 aaPredicted RBP3.38□□□□□ -1.87
SCNN1A-203ENST00000360168 KRTAP6-2Q3LI66 62 aa3.31□□□□□ -1.88
SCNN1A-203ENST00000360168 NEBP20929 6669 aa3.22□□□□□ -1.89
SCNN1A-203ENST00000360168 MUC19Q7Z5P9 8384 aa3.13□□□□□ -1.91
SCNN1A-203ENST00000360168 MT3P25713 68 aa3.11□□□□□ -1.91
SCNN1A-203ENST00000360168 MT4P47944 62 aa3.02□□□□□ -1.93
SCNN1A-203ENST00000360168 KRTAP5-4Q6L8H1 288 aa2.96□□□□□ -1.93
SCNN1A-203ENST00000360168 KRTAP4-6Q9BYQ5 205 aa2.96□□□□□ -1.93
SCNN1A-203ENST00000360168 KRTAP20-1Q3LI63 56 aa2.96□□□□□ -1.94
SCNN1A-203ENST00000360168 KRTAP20-2Q3LI61 65 aa2.84□□□□□ -1.95
SCNN1A-203ENST00000360168 HMCN1Q96RW7 5635 aa2.8□□□□□ -1.96
SCNN1A-203ENST00000360168 MUC5ACP98088 5654 aa2.77□□□□□ -1.97
SCNN1A-203ENST00000360168 LCE1BQ5T7P3 118 aa2.77□□□□□ -1.97
SCNN1A-203ENST00000360168 KRTAP4-11Q9BYQ6 195 aa2.7□□□□□ -1.98
SCNN1A-203ENST00000360168 KRTAP5-2Q701N4 177 aa2.7□□□□□ -1.98
SCNN1A-203ENST00000360168 KRTAP5-3Q6L8H2 238 aa2.69□□□□□ -1.98
SCNN1A-203ENST00000360168 KRTAP5-10Q6L8G5 202 aa2.47□□□□□ -2.01
SCNN1A-203ENST00000360168 LCE1CQ5T751 118 aa2.47□□□□□ -2.01
SCNN1A-203ENST00000360168 KRTAP4-12Q9BQ66 201 aa2.45□□□□□ -2.02
SCNN1A-203ENST00000360168 AHNAK2Q8IVF2 5795 aa2.38□□□□□ -2.03
SCNN1A-203ENST00000360168 KRTAP4-4Q9BYR3 166 aa2.37□□□□□ -2.03
SCNN1A-203ENST00000360168 KRTAP5-1Q6L8H4 278 aa2.36□□□□□ -2.03
SCNN1A-203ENST00000360168 KRTAP4-2Q9BYR5 136 aa2.33□□□□□ -2.04
SCNN1A-203ENST00000360168 KRTAP5-8O75690 187 aa2.32□□□□□ -2.04
SCNN1A-203ENST00000360168 MUC5BQ9HC84 5762 aaPredicted RBP2.22□□□□□ -2.05
SCNN1A-203ENST00000360168 KRTAP21-2Q3LI59 83 aa2.21□□□□□ -2.06
SCNN1A-203ENST00000360168 GPR98Q8WXG9 6306 aa2.18□□□□□ -2.06
SCNN1A-203ENST00000360168 KRTAP5-7Q6L8G8 165 aa2.17□□□□□ -2.06
SCNN1A-203ENST00000360168 KRTAP21-1Q3LI58 79 aa2.16□□□□□ -2.06
SCNN1A-203ENST00000360168 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.08□□□□□ -2.08
SCNN1A-203ENST00000360168 KRTAP5-11Q6L8G4 156 aa1.98□□□□□ -2.09
SCNN1A-203ENST00000360168 AHNAKQ09666 5890 aaKnown RBP1.74□□□□□ -2.13
SCNN1A-203ENST00000360168 PHGR1C9JFL3 82 aa1.72□□□□□ -2.13
SCNN1A-203ENST00000360168 MUC16Q8WXI7 14507 aa1.16□□□□□ -2.22
Retrieved 77 of 20,778 RNA–protein pairs in 118.8 ms