RNA–Protein interactions for RNA: ENST00000358544.6

VPS13B-203, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13B, Length 14,094 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-203ENST00000358544 KRTAP19-3Q7Z4W3 81 aa1.86□□□□□ -2.11
VPS13B-203ENST00000358544 MT1MQ8N339 61 aa1.84□□□□□ -2.11
VPS13B-203ENST00000358544 USH2AO75445 5202 aa1.84□□□□□ -2.11
VPS13B-203ENST00000358544 LOC100996750A0A140TA64 210 aa1.82□□□□□ -2.12
VPS13B-203ENST00000358544 MDN1Q9NU22 5596 aa1.82□□□□□ -2.12
VPS13B-203ENST00000358544 SPRR2EP22531 72 aa1.8□□□□□ -2.12
VPS13B-203ENST00000358544 SPRR2BP35325 72 aa1.8□□□□□ -2.12
VPS13B-203ENST00000358544 SPRR2AP35326 72 aa1.8□□□□□ -2.12
VPS13B-203ENST00000358544 MT1AP04731 61 aa1.79□□□□□ -2.12
VPS13B-203ENST00000358544 SYNE1Q8NF91 8797 aaKnown RBP1.78□□□□□ -2.12
VPS13B-203ENST00000358544 KRTAP4-9Q9BYQ8 210 aa1.78□□□□□ -2.12
VPS13B-203ENST00000358544 LCE2BO14633 110 aa1.77□□□□□ -2.13
VPS13B-203ENST00000358544 KRTAP9-6A8MVA2 160 aa1.77□□□□□ -2.13
VPS13B-203ENST00000358544 KRTAP4-3Q9BYR4 195 aa1.75□□□□□ -2.13
VPS13B-203ENST00000358544 KRTAP19-7Q3SYF9 63 aa1.75□□□□□ -2.13
VPS13B-203ENST00000358544 SPRR2DP22532 72 aa1.74□□□□□ -2.13
VPS13B-203ENST00000358544 MUC2Q02817 5179 aa1.73□□□□□ -2.13
VPS13B-203ENST00000358544 KMT2DO14686 5537 aa1.72□□□□□ -2.13
VPS13B-203ENST00000358544 KRTAP6-2Q3LI66 62 aa1.71□□□□□ -2.14
VPS13B-203ENST00000358544 KRTAP9-7A8MTY7 169 aa1.71□□□□□ -2.14
VPS13B-203ENST00000358544 FCGBPQ9Y6R7 5405 aaPredicted RBP1.7□□□□□ -2.14
VPS13B-203ENST00000358544 KRTAP9-2Q9BYQ4 174 aa1.67□□□□□ -2.14
VPS13B-203ENST00000358544 GPR98Q8WXG9 6306 aa1.67□□□□□ -2.14
VPS13B-203ENST00000358544 KRTAP6-1Q3LI64 71 aa1.66□□□□□ -2.14
VPS13B-203ENST00000358544 KRTAP9-6A0A140TA67 174 aa1.62□□□□□ -2.15
VPS13B-203ENST00000358544 LCE1DQ5T752 114 aa1.61□□□□□ -2.15
VPS13B-203ENST00000358544 KRTAP19-6Q3LI70 58 aa1.61□□□□□ -2.15
VPS13B-203ENST00000358544 LCE1BQ5T7P3 118 aa1.6□□□□□ -2.15
VPS13B-203ENST00000358544 KRTAP2-2Q9BYT5 123 aa1.6□□□□□ -2.15
VPS13B-203ENST00000358544 LCE2DQ5TA82 110 aaPredicted RBP1.59□□□□□ -2.15
VPS13B-203ENST00000358544 LCE1AQ5T7P2 110 aa1.56□□□□□ -2.16
VPS13B-203ENST00000358544 MT4P47944 62 aa1.54□□□□□ -2.16
VPS13B-203ENST00000358544 KRTAP9-4Q9BYQ2 154 aa1.53□□□□□ -2.16
VPS13B-203ENST00000358544 LCE5AQ5TCM9 118 aa1.52□□□□□ -2.17
VPS13B-203ENST00000358544 KRTAP6-3Q3LI67 103 aa1.46□□□□□ -2.18
VPS13B-203ENST00000358544 SSPOA2VEC9 5147 aa1.46□□□□□ -2.18
VPS13B-203ENST00000358544 KRTAP5-5Q701N2 237 aaPredicted RBP1.44□□□□□ -2.18
VPS13B-203ENST00000358544 LCE1EQ5T753 118 aa1.44□□□□□ -2.18
VPS13B-203ENST00000358544 LCE2AQ5TA79 106 aaPredicted RBP1.44□□□□□ -2.18
VPS13B-203ENST00000358544 LCE4AQ5TA78 99 aa1.41□□□□□ -2.18
VPS13B-203ENST00000358544 AHNAK2Q8IVF2 5795 aa1.38□□□□□ -2.19
VPS13B-203ENST00000358544 KRTAP4-11Q9BYQ6 195 aa1.37□□□□□ -2.19
VPS13B-203ENST00000358544 DSTQ03001 7570 aaKnown RBP1.37□□□□□ -2.19
VPS13B-203ENST00000358544 SYNE2Q8WXH0 6885 aaKnown RBP1.35□□□□□ -2.19
VPS13B-203ENST00000358544 HMCN1Q96RW7 5635 aa1.35□□□□□ -2.19
VPS13B-203ENST00000358544 FSIP2Q5CZC0 6907 aa1.34□□□□□ -2.19
VPS13B-203ENST00000358544 LCE1CQ5T751 118 aa1.3□□□□□ -2.2
VPS13B-203ENST00000358544 LCE1FQ5T754 118 aa1.3□□□□□ -2.2
VPS13B-203ENST00000358544 MACF1Q9UPN3 7388 aaKnown RBP1.25□□□□□ -2.21
VPS13B-203ENST00000358544 NEBP20929 6669 aa1.24□□□□□ -2.21
VPS13B-203ENST00000358544 KRTAP9-1A8MXZ3 250 aaPredicted RBP1.24□□□□□ -2.21
VPS13B-203ENST00000358544 MUC5BQ9HC84 5762 aaPredicted RBP1.24□□□□□ -2.21
VPS13B-203ENST00000358544 KRTAP20-1Q3LI63 56 aa1.23□□□□□ -2.21
VPS13B-203ENST00000358544 MUC5ACP98088 5654 aa1.23□□□□□ -2.21
VPS13B-203ENST00000358544 OBSCNQ5VST9 7968 aa1.23□□□□□ -2.21
VPS13B-203ENST00000358544 KRTAP9-9Q9BYP9 154 aa1.2□□□□□ -2.22
VPS13B-203ENST00000358544 KRTAP4-4Q9BYR3 166 aa1.2□□□□□ -2.22
VPS13B-203ENST00000358544 KRTAP5-9P26371 169 aa1.2□□□□□ -2.22
VPS13B-203ENST00000358544 KRTAP20-2Q3LI61 65 aa1.18□□□□□ -2.22
VPS13B-203ENST00000358544 KRTAP4-6Q9BYQ5 205 aa1.14□□□□□ -2.23
VPS13B-203ENST00000358544 AHNAKQ09666 5890 aaKnown RBP1.13□□□□□ -2.23
VPS13B-203ENST00000358544 KRTAP5-4Q6L8H1 288 aa1.11□□□□□ -2.23
VPS13B-203ENST00000358544 MUC19Q7Z5P9 8384 aa1.1□□□□□ -2.23
VPS13B-203ENST00000358544 KRTAP4-12Q9BQ66 201 aa1.07□□□□□ -2.24
VPS13B-203ENST00000358544 KRTAP4-2Q9BYR5 136 aa1.07□□□□□ -2.24
VPS13B-203ENST00000358544 KRTAP5-10Q6L8G5 202 aa0.99□□□□□ -2.25
VPS13B-203ENST00000358544 KRTAP5-3Q6L8H2 238 aa0.96□□□□□ -2.26
VPS13B-203ENST00000358544 KRTAP5-2Q701N4 177 aa0.95□□□□□ -2.26
VPS13B-203ENST00000358544 KRTAP21-1Q3LI58 79 aa0.92□□□□□ -2.26
VPS13B-203ENST00000358544 KRTAP5-1Q6L8H4 278 aa0.88□□□□□ -2.27
VPS13B-203ENST00000358544 KRTAP5-11Q6L8G4 156 aa0.88□□□□□ -2.27
VPS13B-203ENST00000358544 KRTAP5-6Q6L8G9 129 aaPredicted RBP0.85□□□□□ -2.27
VPS13B-203ENST00000358544 KRTAP21-2Q3LI59 83 aa0.82□□□□□ -2.28
VPS13B-203ENST00000358544 KRTAP5-7Q6L8G8 165 aa0.81□□□□□ -2.28
VPS13B-203ENST00000358544 KRTAP5-8O75690 187 aa0.77□□□□□ -2.29
VPS13B-203ENST00000358544 PHGR1C9JFL3 82 aa0.71□□□□□ -2.3
VPS13B-203ENST00000358544 MUC16Q8WXI7 14507 aa0.64□□□□□ -2.31
Retrieved 77 of 20,778 RNA–protein pairs in 25.3 ms