RNA–Protein interactions for RNA: ENST00000357903.7

APP-204, Transcript of amyloid beta precursor protein, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene APP, Length 3,543 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-204ENST00000357903 MT1LQ93083 61 aa5.54□□□□□ -1.52
APP-204ENST00000357903 KRTAP9-6A8MVA2 160 aa5.54□□□□□ -1.52
APP-204ENST00000357903 KRTAP19-6Q3LI70 58 aa5.53□□□□□ -1.52
APP-204ENST00000357903 LOC100996750A0A140TA64 210 aa5.48□□□□□ -1.53
APP-204ENST00000357903 MT1GP13640 62 aa5.48□□□□□ -1.53
APP-204ENST00000357903 MACF1Q9UPN3 7388 aaKnown RBP5.47□□□□□ -1.53
APP-204ENST00000357903 SYNE2Q8WXH0 6885 aaKnown RBP5.46□□□□□ -1.53
APP-204ENST00000357903 INE1O15225 51 aa5.31□□□□□ -1.56
APP-204ENST00000357903 LCE2DQ5TA82 110 aaPredicted RBP5.31□□□□□ -1.56
APP-204ENST00000357903 KRTAP19-3Q7Z4W3 81 aa5.3□□□□□ -1.56
APP-204ENST00000357903 KRTAP9-2Q9BYQ4 174 aa5.27□□□□□ -1.57
APP-204ENST00000357903 MT1MQ8N339 61 aa5.26□□□□□ -1.57
APP-204ENST00000357903 MDN1Q9NU22 5596 aa5.17□□□□□ -1.58
APP-204ENST00000357903 LCE3BQ5TA77 95 aa5.13□□□□□ -1.59
APP-204ENST00000357903 SPRR2EP22531 72 aa5.08□□□□□ -1.6
APP-204ENST00000357903 SPRR2BP35325 72 aa5.08□□□□□ -1.6
APP-204ENST00000357903 SPRR2AP35326 72 aa5.08□□□□□ -1.6
APP-204ENST00000357903 KRTAP19-4Q3LI73 84 aa5.05□□□□□ -1.6
APP-204ENST00000357903 KRTAP2-3P0C7H8 128 aa5.03□□□□□ -1.6
APP-204ENST00000357903 KRTAP2-4Q9BYR9 128 aa5.03□□□□□ -1.6
APP-204ENST00000357903 KRTAP2-1Q9BYU5 128 aa5.03□□□□□ -1.6
APP-204ENST00000357903 LCE5AQ5TCM9 118 aa4.99□□□□□ -1.61
APP-204ENST00000357903 KRTAP4-9Q9BYQ8 210 aa4.96□□□□□ -1.62
APP-204ENST00000357903 KRTAP12-4P60329 112 aa4.89□□□□□ -1.63
APP-204ENST00000357903 LCE1AQ5T7P2 110 aa4.86□□□□□ -1.63
APP-204ENST00000357903 SPRR2DP22532 72 aa4.84□□□□□ -1.63
APP-204ENST00000357903 KRTAP6-1Q3LI64 71 aa4.8□□□□□ -1.64
APP-204ENST00000357903 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.66□□□□□ -1.66
APP-204ENST00000357903 MT1AP04731 61 aa4.62□□□□□ -1.67
APP-204ENST00000357903 LCE3DQ9BYE3 92 aa4.61□□□□□ -1.67
APP-204ENST00000357903 KRTAP9-6A0A140TA67 174 aa4.61□□□□□ -1.67
APP-204ENST00000357903 KRTAP5-9P26371 169 aa4.6□□□□□ -1.67
APP-204ENST00000357903 LCE3EQ5T5B0 92 aa4.49□□□□□ -1.69
APP-204ENST00000357903 MT4P47944 62 aa4.48□□□□□ -1.69
APP-204ENST00000357903 KRTAP6-3Q3LI67 103 aa4.47□□□□□ -1.69
APP-204ENST00000357903 KRTAP6-2Q3LI66 62 aa4.43□□□□□ -1.7
APP-204ENST00000357903 KRTAP9-7A8MTY7 169 aa4.38□□□□□ -1.71
APP-204ENST00000357903 KRTAP9-4Q9BYQ2 154 aa4.35□□□□□ -1.71
APP-204ENST00000357903 KRTAP5-5Q701N2 237 aaPredicted RBP4.31□□□□□ -1.72
APP-204ENST00000357903 MT3P25713 68 aa4.31□□□□□ -1.72
APP-204ENST00000357903 PRM1P04553 51 aa4.3□□□□□ -1.72
APP-204ENST00000357903 KRTAP4-6Q9BYQ5 205 aa4.22□□□□□ -1.73
APP-204ENST00000357903 NEBP20929 6669 aa4.22□□□□□ -1.73
APP-204ENST00000357903 LCE1DQ5T752 114 aa4.01□□□□□ -1.77
APP-204ENST00000357903 HMCN1Q96RW7 5635 aa3.95□□□□□ -1.78
APP-204ENST00000357903 LCE1BQ5T7P3 118 aa3.92□□□□□ -1.78
APP-204ENST00000357903 KRTAP20-2Q3LI61 65 aa3.91□□□□□ -1.78
APP-204ENST00000357903 KRTAP2-2Q9BYT5 123 aa3.91□□□□□ -1.78
APP-204ENST00000357903 KRTAP20-1Q3LI63 56 aa3.87□□□□□ -1.79
APP-204ENST00000357903 LCE4AQ5TA78 99 aa3.87□□□□□ -1.79
APP-204ENST00000357903 KRTAP5-4Q6L8H1 288 aa3.85□□□□□ -1.79
APP-204ENST00000357903 MUC5ACP98088 5654 aa3.69□□□□□ -1.82
APP-204ENST00000357903 MUC19Q7Z5P9 8384 aa3.6□□□□□ -1.83
APP-204ENST00000357903 KRTAP5-2Q701N4 177 aa3.53□□□□□ -1.84
APP-204ENST00000357903 KRTAP5-3Q6L8H2 238 aa3.52□□□□□ -1.85
APP-204ENST00000357903 KRTAP4-11Q9BYQ6 195 aa3.36□□□□□ -1.87
APP-204ENST00000357903 LCE1EQ5T753 118 aa3.25□□□□□ -1.89
APP-204ENST00000357903 AHNAK2Q8IVF2 5795 aa3.24□□□□□ -1.89
APP-204ENST00000357903 KRTAP4-4Q9BYR3 166 aa3.22□□□□□ -1.89
APP-204ENST00000357903 KRTAP4-2Q9BYR5 136 aa3.19□□□□□ -1.9
APP-204ENST00000357903 MUC5BQ9HC84 5762 aaPredicted RBP3.17□□□□□ -1.9
APP-204ENST00000357903 KRTAP5-1Q6L8H4 278 aa3.15□□□□□ -1.9
APP-204ENST00000357903 KRTAP4-12Q9BQ66 201 aa3.15□□□□□ -1.91
APP-204ENST00000357903 KRTAP5-10Q6L8G5 202 aa3.13□□□□□ -1.91
APP-204ENST00000357903 GPR98Q8WXG9 6306 aa3.12□□□□□ -1.91
APP-204ENST00000357903 LCE1CQ5T751 118 aa3.09□□□□□ -1.91
APP-204ENST00000357903 KRTAP5-8O75690 187 aa3.06□□□□□ -1.92
APP-204ENST00000357903 KRTAP21-2Q3LI59 83 aa2.92□□□□□ -1.94
APP-204ENST00000357903 KRTAP9-9Q9BYP9 154 aa2.91□□□□□ -1.94
APP-204ENST00000357903 LCE1FQ5T754 118 aa2.86□□□□□ -1.95
APP-204ENST00000357903 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.7□□□□□ -1.98
APP-204ENST00000357903 KRTAP5-11Q6L8G4 156 aa2.65□□□□□ -1.99
APP-204ENST00000357903 KRTAP5-7Q6L8G8 165 aa2.63□□□□□ -1.99
APP-204ENST00000357903 AHNAKQ09666 5890 aaKnown RBP2.52□□□□□ -2.01
APP-204ENST00000357903 PHGR1C9JFL3 82 aa2.33□□□□□ -2.04
APP-204ENST00000357903 KRTAP21-1Q3LI58 79 aa2.3□□□□□ -2.04
APP-204ENST00000357903 MUC16Q8WXI7 14507 aa1.5□□□□□ -2.17
Retrieved 77 of 20,778 RNA–protein pairs in 11.1 ms