RNA–Protein interactions for RNA: ENST00000357376.7

RTN4-203, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,110 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-203ENST00000357376 SPRR2FQ96RM1 72 aa2.28□□□□□ -2.04
RTN4-203ENST00000357376 DSTQ03001 7570 aaKnown RBP2.27□□□□□ -2.05
RTN4-203ENST00000357376 KRTAP4-3Q9BYR4 195 aa2.26□□□□□ -2.05
RTN4-203ENST00000357376 SYNE1Q8NF91 8797 aaKnown RBP2.25□□□□□ -2.05
RTN4-203ENST00000357376 KRTAP19-4Q3LI73 84 aa2.25□□□□□ -2.05
RTN4-203ENST00000357376 FCGBPQ9Y6R7 5405 aaPredicted RBP2.23□□□□□ -2.05
RTN4-203ENST00000357376 KRTAP12-4P60329 112 aa2.22□□□□□ -2.05
RTN4-203ENST00000357376 LCE3BQ5TA77 95 aa2.22□□□□□ -2.05
RTN4-203ENST00000357376 KRTAP2-3P0C7H8 128 aa2.2□□□□□ -2.06
RTN4-203ENST00000357376 KRTAP2-4Q9BYR9 128 aa2.2□□□□□ -2.06
RTN4-203ENST00000357376 KRTAP2-1Q9BYU5 128 aa2.2□□□□□ -2.06
RTN4-203ENST00000357376 KRTAP19-3Q7Z4W3 81 aa2.19□□□□□ -2.06
RTN4-203ENST00000357376 MT1MQ8N339 61 aa2.17□□□□□ -2.06
RTN4-203ENST00000357376 MUC12Q9UKN1 5478 aa2.17□□□□□ -2.06
RTN4-203ENST00000357376 KRTAP19-6Q3LI70 58 aa2.16□□□□□ -2.06
RTN4-203ENST00000357376 SSPOA2VEC9 5147 aa2.14□□□□□ -2.07
RTN4-203ENST00000357376 SYNE2Q8WXH0 6885 aaKnown RBP2.11□□□□□ -2.07
RTN4-203ENST00000357376 KRTAP4-9Q9BYQ8 210 aa2.09□□□□□ -2.07
RTN4-203ENST00000357376 KRTAP4-12Q9BQ66 201 aa2.08□□□□□ -2.08
RTN4-203ENST00000357376 LCE3DQ9BYE3 92 aa2.06□□□□□ -2.08
RTN4-203ENST00000357376 SPRR2EP22531 72 aa2.05□□□□□ -2.08
RTN4-203ENST00000357376 SPRR2BP35325 72 aa2.05□□□□□ -2.08
RTN4-203ENST00000357376 SPRR2AP35326 72 aa2.05□□□□□ -2.08
RTN4-203ENST00000357376 KRTAP9-2Q9BYQ4 174 aa2.05□□□□□ -2.08
RTN4-203ENST00000357376 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.03□□□□□ -2.08
RTN4-203ENST00000357376 LCE3EQ5T5B0 92 aa2.02□□□□□ -2.09
RTN4-203ENST00000357376 KRTAP9-6A0A140TA67 174 aa2.02□□□□□ -2.09
RTN4-203ENST00000357376 MACF1Q9UPN3 7388 aaKnown RBP2.01□□□□□ -2.09
RTN4-203ENST00000357376 LCE5AQ5TCM9 118 aa2□□□□□ -2.09
RTN4-203ENST00000357376 KRTAP6-1Q3LI64 71 aa1.98□□□□□ -2.09
RTN4-203ENST00000357376 PRM1P04553 51 aa1.97□□□□□ -2.09
RTN4-203ENST00000357376 KRTAP9-9Q9BYP9 154 aa1.96□□□□□ -2.1
RTN4-203ENST00000357376 KRTAP9-4Q9BYQ2 154 aa1.96□□□□□ -2.1
RTN4-203ENST00000357376 SPRR2DP22532 72 aa1.96□□□□□ -2.1
RTN4-203ENST00000357376 MT1AP04731 61 aa1.95□□□□□ -2.1
RTN4-203ENST00000357376 KRTAP9-7A8MTY7 169 aa1.91□□□□□ -2.1
RTN4-203ENST00000357376 MDN1Q9NU22 5596 aa1.89□□□□□ -2.11
RTN4-203ENST00000357376 LCE1DQ5T752 114 aa1.89□□□□□ -2.11
RTN4-203ENST00000357376 LCE1AQ5T7P2 110 aa1.89□□□□□ -2.11
RTN4-203ENST00000357376 MT3P25713 68 aa1.85□□□□□ -2.11
RTN4-203ENST00000357376 KRTAP6-2Q3LI66 62 aa1.83□□□□□ -2.12
RTN4-203ENST00000357376 HMCN1Q96RW7 5635 aa1.8□□□□□ -2.12
RTN4-203ENST00000357376 KRTAP4-2Q9BYR5 136 aa1.8□□□□□ -2.12
RTN4-203ENST00000357376 MT4P47944 62 aa1.79□□□□□ -2.12
RTN4-203ENST00000357376 KRTAP4-11Q9BYQ6 195 aa1.78□□□□□ -2.12
RTN4-203ENST00000357376 MUC19Q7Z5P9 8384 aa1.77□□□□□ -2.13
RTN4-203ENST00000357376 KRTAP5-5Q701N2 237 aaPredicted RBP1.74□□□□□ -2.13
RTN4-203ENST00000357376 KRTAP5-9P26371 169 aa1.74□□□□□ -2.13
RTN4-203ENST00000357376 LCE4AQ5TA78 99 aa1.71□□□□□ -2.14
RTN4-203ENST00000357376 KRTAP6-3Q3LI67 103 aa1.68□□□□□ -2.14
RTN4-203ENST00000357376 LCE1BQ5T7P3 118 aa1.67□□□□□ -2.14
RTN4-203ENST00000357376 LCE1EQ5T753 118 aa1.66□□□□□ -2.14
RTN4-203ENST00000357376 KRTAP2-2Q9BYT5 123 aa1.64□□□□□ -2.15
RTN4-203ENST00000357376 KRTAP5-3Q6L8H2 238 aa1.63□□□□□ -2.15
RTN4-203ENST00000357376 NEBP20929 6669 aa1.54□□□□□ -2.16
RTN4-203ENST00000357376 KRTAP20-2Q3LI61 65 aa1.53□□□□□ -2.16
RTN4-203ENST00000357376 KRTAP5-4Q6L8H1 288 aa1.46□□□□□ -2.18
RTN4-203ENST00000357376 MUC5ACP98088 5654 aa1.44□□□□□ -2.18
RTN4-203ENST00000357376 KRTAP20-1Q3LI63 56 aa1.44□□□□□ -2.18
RTN4-203ENST00000357376 MUC5BQ9HC84 5762 aaPredicted RBP1.41□□□□□ -2.18
RTN4-203ENST00000357376 KRTAP5-2Q701N4 177 aa1.35□□□□□ -2.19
RTN4-203ENST00000357376 KRTAP4-4Q9BYR3 166 aa1.34□□□□□ -2.2
RTN4-203ENST00000357376 KRTAP5-10Q6L8G5 202 aa1.32□□□□□ -2.2
RTN4-203ENST00000357376 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.31□□□□□ -2.2
RTN4-203ENST00000357376 LCE1FQ5T754 118 aa1.3□□□□□ -2.2
RTN4-203ENST00000357376 LCE1CQ5T751 118 aa1.25□□□□□ -2.21
RTN4-203ENST00000357376 GPR98Q8WXG9 6306 aa1.24□□□□□ -2.21
RTN4-203ENST00000357376 AHNAK2Q8IVF2 5795 aa1.2□□□□□ -2.22
RTN4-203ENST00000357376 KRTAP5-1Q6L8H4 278 aa1.19□□□□□ -2.22
RTN4-203ENST00000357376 KRTAP5-11Q6L8G4 156 aa1.18□□□□□ -2.22
RTN4-203ENST00000357376 KRTAP21-2Q3LI59 83 aa1.17□□□□□ -2.22
RTN4-203ENST00000357376 KRTAP5-7Q6L8G8 165 aa1.15□□□□□ -2.22
RTN4-203ENST00000357376 KRTAP5-8O75690 187 aa1.14□□□□□ -2.23
RTN4-203ENST00000357376 AHNAKQ09666 5890 aaKnown RBP1.06□□□□□ -2.24
RTN4-203ENST00000357376 KRTAP21-1Q3LI58 79 aa1.04□□□□□ -2.24
RTN4-203ENST00000357376 PHGR1C9JFL3 82 aa0.92□□□□□ -2.26
RTN4-203ENST00000357376 MUC16Q8WXI7 14507 aa0.62□□□□□ -2.31
Retrieved 77 of 20,778 RNA–protein pairs in 90.6 ms