RNA–Protein interactions for RNA: ENST00000356226.8

FGFR2-204, Transcript of fibroblast growth factor receptor 2, humanhuman

TSL 1 (best) BASIC

Gene FGFR2, Length 3,547 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR2-204ENST00000356226 LOC100996750A0A140TA64 210 aa6.7□□□□□ -1.34
FGFR2-204ENST00000356226 MT1LQ93083 61 aa6.63□□□□□ -1.35
FGFR2-204ENST00000356226 MT1GP13640 62 aa6.62□□□□□ -1.35
FGFR2-204ENST00000356226 MT1EP04732 61 aa6.6□□□□□ -1.35
FGFR2-204ENST00000356226 SYNE2Q8WXH0 6885 aaKnown RBP6.51□□□□□ -1.37
FGFR2-204ENST00000356226 SPRR2FQ96RM1 72 aa6.42□□□□□ -1.38
FGFR2-204ENST00000356226 KRTAP2-3P0C7H8 128 aa6.32□□□□□ -1.4
FGFR2-204ENST00000356226 KRTAP2-4Q9BYR9 128 aa6.32□□□□□ -1.4
FGFR2-204ENST00000356226 KRTAP2-1Q9BYU5 128 aa6.32□□□□□ -1.4
FGFR2-204ENST00000356226 MACF1Q9UPN3 7388 aaKnown RBP6.28□□□□□ -1.4
FGFR2-204ENST00000356226 LCE3BQ5TA77 95 aa6.28□□□□□ -1.4
FGFR2-204ENST00000356226 LCE2DQ5TA82 110 aaPredicted RBP6.26□□□□□ -1.41
FGFR2-204ENST00000356226 KRTAP19-6Q3LI70 58 aa6.23□□□□□ -1.41
FGFR2-204ENST00000356226 MT1MQ8N339 61 aa6.22□□□□□ -1.41
FGFR2-204ENST00000356226 KRTAP12-4P60329 112 aa6.21□□□□□ -1.42
FGFR2-204ENST00000356226 KRTAP19-3Q7Z4W3 81 aa6.2□□□□□ -1.42
FGFR2-204ENST00000356226 KRTAP4-9Q9BYQ8 210 aa6.19□□□□□ -1.42
FGFR2-204ENST00000356226 MDN1Q9NU22 5596 aa6.11□□□□□ -1.43
FGFR2-204ENST00000356226 KRTAP19-4Q3LI73 84 aa5.93□□□□□ -1.46
FGFR2-204ENST00000356226 LCE5AQ5TCM9 118 aa5.81□□□□□ -1.48
FGFR2-204ENST00000356226 KRTAP6-1Q3LI64 71 aa5.78□□□□□ -1.48
FGFR2-204ENST00000356226 SPRR2EP22531 72 aa5.73□□□□□ -1.49
FGFR2-204ENST00000356226 SPRR2BP35325 72 aa5.73□□□□□ -1.49
FGFR2-204ENST00000356226 SPRR2AP35326 72 aa5.73□□□□□ -1.49
FGFR2-204ENST00000356226 LCE3DQ9BYE3 92 aa5.68□□□□□ -1.5
FGFR2-204ENST00000356226 KRTAP9-2Q9BYQ4 174 aa5.58□□□□□ -1.52
FGFR2-204ENST00000356226 KRTAP9-7A8MTY7 169 aa5.56□□□□□ -1.52
FGFR2-204ENST00000356226 LCE3EQ5T5B0 92 aa5.55□□□□□ -1.52
FGFR2-204ENST00000356226 LCE1AQ5T7P2 110 aa5.52□□□□□ -1.53
FGFR2-204ENST00000356226 PRM1P04553 51 aa5.5□□□□□ -1.53
FGFR2-204ENST00000356226 MT1AP04731 61 aa5.47□□□□□ -1.53
FGFR2-204ENST00000356226 SPRR2DP22532 72 aa5.44□□□□□ -1.54
FGFR2-204ENST00000356226 KRTAP6-2Q3LI66 62 aa5.28□□□□□ -1.56
FGFR2-204ENST00000356226 KRTAP5-5Q701N2 237 aaPredicted RBP5.18□□□□□ -1.58
FGFR2-204ENST00000356226 KRTAP9-4Q9BYQ2 154 aa5.15□□□□□ -1.58
FGFR2-204ENST00000356226 MT4P47944 62 aa5.12□□□□□ -1.59
FGFR2-204ENST00000356226 KRTAP5-9P26371 169 aa5.1□□□□□ -1.59
FGFR2-204ENST00000356226 MT3P25713 68 aa5.07□□□□□ -1.6
FGFR2-204ENST00000356226 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.95□□□□□ -1.62
FGFR2-204ENST00000356226 KRTAP4-6Q9BYQ5 205 aa4.86□□□□□ -1.63
FGFR2-204ENST00000356226 KRTAP9-6A0A140TA67 174 aa4.81□□□□□ -1.64
FGFR2-204ENST00000356226 KRTAP6-3Q3LI67 103 aa4.79□□□□□ -1.64
FGFR2-204ENST00000356226 LCE1DQ5T752 114 aa4.73□□□□□ -1.65
FGFR2-204ENST00000356226 NEBP20929 6669 aa4.73□□□□□ -1.65
FGFR2-204ENST00000356226 LCE1BQ5T7P3 118 aa4.65□□□□□ -1.66
FGFR2-204ENST00000356226 KRTAP2-2Q9BYT5 123 aa4.61□□□□□ -1.67
FGFR2-204ENST00000356226 HMCN1Q96RW7 5635 aa4.54□□□□□ -1.68
FGFR2-204ENST00000356226 MUC19Q7Z5P9 8384 aa4.54□□□□□ -1.68
FGFR2-204ENST00000356226 KRTAP20-2Q3LI61 65 aa4.45□□□□□ -1.7
FGFR2-204ENST00000356226 MUC5ACP98088 5654 aa4.42□□□□□ -1.7
FGFR2-204ENST00000356226 KRTAP5-4Q6L8H1 288 aa4.34□□□□□ -1.72
FGFR2-204ENST00000356226 KRTAP4-11Q9BYQ6 195 aa4.29□□□□□ -1.72
FGFR2-204ENST00000356226 LCE4AQ5TA78 99 aa4.24□□□□□ -1.73
FGFR2-204ENST00000356226 KRTAP5-2Q701N4 177 aa4.02□□□□□ -1.77
FGFR2-204ENST00000356226 KRTAP20-1Q3LI63 56 aa4.01□□□□□ -1.77
FGFR2-204ENST00000356226 KRTAP5-3Q6L8H2 238 aa3.96□□□□□ -1.77
FGFR2-204ENST00000356226 LCE1EQ5T753 118 aa3.95□□□□□ -1.78
FGFR2-204ENST00000356226 KRTAP4-12Q9BQ66 201 aa3.94□□□□□ -1.78
FGFR2-204ENST00000356226 KRTAP4-4Q9BYR3 166 aa3.93□□□□□ -1.78
FGFR2-204ENST00000356226 KRTAP5-10Q6L8G5 202 aa3.85□□□□□ -1.79
FGFR2-204ENST00000356226 KRTAP9-9Q9BYP9 154 aa3.83□□□□□ -1.8
FGFR2-204ENST00000356226 MUC5BQ9HC84 5762 aaPredicted RBP3.76□□□□□ -1.81
FGFR2-204ENST00000356226 KRTAP4-2Q9BYR5 136 aa3.73□□□□□ -1.81
FGFR2-204ENST00000356226 AHNAK2Q8IVF2 5795 aa3.72□□□□□ -1.81
FGFR2-204ENST00000356226 KRTAP5-1Q6L8H4 278 aa3.6□□□□□ -1.83
FGFR2-204ENST00000356226 LCE1CQ5T751 118 aa3.57□□□□□ -1.84
FGFR2-204ENST00000356226 KRTAP21-2Q3LI59 83 aa3.49□□□□□ -1.85
FGFR2-204ENST00000356226 KRTAP5-8O75690 187 aa3.38□□□□□ -1.87
FGFR2-204ENST00000356226 GPR98Q8WXG9 6306 aa3.34□□□□□ -1.88
FGFR2-204ENST00000356226 LCE1FQ5T754 118 aa3.3□□□□□ -1.88
FGFR2-204ENST00000356226 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.11□□□□□ -1.91
FGFR2-204ENST00000356226 KRTAP5-11Q6L8G4 156 aa3.02□□□□□ -1.93
FGFR2-204ENST00000356226 KRTAP21-1Q3LI58 79 aa2.99□□□□□ -1.93
FGFR2-204ENST00000356226 KRTAP5-7Q6L8G8 165 aa2.87□□□□□ -1.95
FGFR2-204ENST00000356226 AHNAKQ09666 5890 aaKnown RBP2.85□□□□□ -1.95
FGFR2-204ENST00000356226 PHGR1C9JFL3 82 aa2.68□□□□□ -1.98
FGFR2-204ENST00000356226 MUC16Q8WXI7 14507 aa1.8□□□□□ -2.12
Retrieved 77 of 20,778 RNA–protein pairs in 84 ms