RNA–Protein interactions for RNA: ENST00000356083.7

COL27A1-201, Transcript of collagen type XXVII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL27A1, Length 7,790 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-201ENST00000356083 LCE1FQ5T754 118 aa5.24□□□□□ -1.57
COL27A1-201ENST00000356083 LCE1AQ5T7P2 110 aa5.24□□□□□ -1.57
COL27A1-201ENST00000356083 KRTAP19-6Q3LI70 58 aa5.22□□□□□ -1.57
COL27A1-201ENST00000356083 MT1EP04732 61 aa5.21□□□□□ -1.58
COL27A1-201ENST00000356083 MT1MQ8N339 61 aa5.14□□□□□ -1.59
COL27A1-201ENST00000356083 KRTAP9-7A8MTY7 169 aa5.08□□□□□ -1.6
COL27A1-201ENST00000356083 FSIP2Q5CZC0 6907 aa5.03□□□□□ -1.6
COL27A1-201ENST00000356083 MUC17Q685J3 4493 aa5□□□□□ -1.61
COL27A1-201ENST00000356083 KRTAP2-3P0C7H8 128 aa4.97□□□□□ -1.61
COL27A1-201ENST00000356083 KRTAP2-4Q9BYR9 128 aa4.97□□□□□ -1.61
COL27A1-201ENST00000356083 KMT2CQ8NEZ4 4911 aaKnown RBP4.9□□□□□ -1.63
COL27A1-201ENST00000356083 KRTAP2-1Q9BYU5 128 aa4.8□□□□□ -1.64
COL27A1-201ENST00000356083 LCE4AQ5TA78 99 aa4.77□□□□□ -1.65
COL27A1-201ENST00000356083 KRTAP6-2Q3LI66 62 aa4.75□□□□□ -1.65
COL27A1-201ENST00000356083 HERC2O95714 4834 aa4.73□□□□□ -1.65
COL27A1-201ENST00000356083 KRTAP19-2Q3LHN2 52 aa4.73□□□□□ -1.65
COL27A1-201ENST00000356083 KRTAP9-9Q9BYP9 154 aa4.71□□□□□ -1.66
COL27A1-201ENST00000356083 KRTAP2-2Q9BYT5 123 aa4.69□□□□□ -1.66
COL27A1-201ENST00000356083 MT1AP04731 61 aa4.66□□□□□ -1.66
COL27A1-201ENST00000356083 RYR2Q92736 4967 aa4.66□□□□□ -1.66
COL27A1-201ENST00000356083 KIAA1109Q2LD37 5005 aa4.66□□□□□ -1.66
COL27A1-201ENST00000356083 KRTAP6-3Q3LI67 103 aa4.63□□□□□ -1.67
COL27A1-201ENST00000356083 BIRC6Q9NR09 4857 aa4.63□□□□□ -1.67
COL27A1-201ENST00000356083 PCLOQ9Y6V0 5065 aa4.59□□□□□ -1.67
COL27A1-201ENST00000356083 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.58□□□□□ -1.68
COL27A1-201ENST00000356083 KRTAP6-1Q3LI64 71 aa4.57□□□□□ -1.68
COL27A1-201ENST00000356083 LCE2AQ5TA79 106 aaPredicted RBP4.54□□□□□ -1.68
COL27A1-201ENST00000356083 SYNE1Q8NF91 8797 aaKnown RBP4.52□□□□□ -1.69
COL27A1-201ENST00000356083 HMCN2Q8NDA2 5059 aa4.51□□□□□ -1.69
COL27A1-201ENST00000356083 KRTAP19-7Q3SYF9 63 aa4.5□□□□□ -1.69
COL27A1-201ENST00000356083 HERC1Q15751 4861 aa4.5□□□□□ -1.69
COL27A1-201ENST00000356083 KRTAP9-4Q9BYQ2 154 aa4.44□□□□□ -1.7
COL27A1-201ENST00000356083 MUC2Q02817 5179 aa4.36□□□□□ -1.71
COL27A1-201ENST00000356083 KRTAP20-2Q3LI61 65 aa4.25□□□□□ -1.73
COL27A1-201ENST00000356083 KRTAP9-6A8MVA2 160 aa4.25□□□□□ -1.73
COL27A1-201ENST00000356083 KMT2DO14686 5537 aa4.23□□□□□ -1.73
COL27A1-201ENST00000356083 EPPK1P58107 5090 aaKnown RBP4.2□□□□□ -1.74
COL27A1-201ENST00000356083 KRTAP4-11Q9BYQ6 195 aa4.18□□□□□ -1.74
COL27A1-201ENST00000356083 FAT4Q6V0I7 4981 aa4.16□□□□□ -1.74
COL27A1-201ENST00000356083 OBSCNQ5VST9 7968 aa4.15□□□□□ -1.74
COL27A1-201ENST00000356083 KRTAP4-6Q9BYQ5 205 aa4.13□□□□□ -1.75
COL27A1-201ENST00000356083 KRTAP4-4Q9BYR3 166 aa4.11□□□□□ -1.75
COL27A1-201ENST00000356083 DSTQ03001 7570 aaKnown RBP4.06□□□□□ -1.76
COL27A1-201ENST00000356083 UBR4Q5T4S7 5183 aa4.05□□□□□ -1.76
COL27A1-201ENST00000356083 ABCA13Q86UQ4 5058 aa4.05□□□□□ -1.76
COL27A1-201ENST00000356083 KRTAP4-12Q9BQ66 201 aa4.05□□□□□ -1.76
COL27A1-201ENST00000356083 KRTAP4-2Q9BYR5 136 aa4.05□□□□□ -1.76
COL27A1-201ENST00000356083 RNF213Q63HN8 5207 aa3.86□□□□□ -1.79
COL27A1-201ENST00000356083 FCGBPQ9Y6R7 5405 aaPredicted RBP3.82□□□□□ -1.8
COL27A1-201ENST00000356083 MACF1Q9UPN3 7388 aaKnown RBP3.82□□□□□ -1.8
COL27A1-201ENST00000356083 MUC19Q7Z5P9 8384 aa3.61□□□□□ -1.83
COL27A1-201ENST00000356083 SSPOA2VEC9 5147 aa3.55□□□□□ -1.84
COL27A1-201ENST00000356083 NEBP20929 6669 aa3.47□□□□□ -1.85
COL27A1-201ENST00000356083 USH2AO75445 5202 aa3.44□□□□□ -1.86
COL27A1-201ENST00000356083 KRTAP5-4Q6L8H1 288 aa3.37□□□□□ -1.87
COL27A1-201ENST00000356083 KRTAP5-9P26371 169 aa3.33□□□□□ -1.88
COL27A1-201ENST00000356083 MUC12Q9UKN1 5478 aa3.26□□□□□ -1.89
COL27A1-201ENST00000356083 KRTAP5-5Q701N2 237 aaPredicted RBP3.19□□□□□ -1.9
COL27A1-201ENST00000356083 PHGR1C9JFL3 82 aa3.14□□□□□ -1.91
COL27A1-201ENST00000356083 KRTAP5-3Q6L8H2 238 aa2.91□□□□□ -1.94
COL27A1-201ENST00000356083 MDN1Q9NU22 5596 aa2.81□□□□□ -1.96
COL27A1-201ENST00000356083 KRTAP5-8O75690 187 aa2.76□□□□□ -1.97
COL27A1-201ENST00000356083 MUC5ACP98088 5654 aa2.71□□□□□ -1.98
COL27A1-201ENST00000356083 HMCN1Q96RW7 5635 aa2.49□□□□□ -2.01
COL27A1-201ENST00000356083 GPR98Q8WXG9 6306 aa2.49□□□□□ -2.01
COL27A1-201ENST00000356083 KRTAP5-2Q701N4 177 aa2.47□□□□□ -2.01
COL27A1-201ENST00000356083 KRTAP5-10Q6L8G5 202 aa2.35□□□□□ -2.03
COL27A1-201ENST00000356083 KRTAP5-1Q6L8H4 278 aa2.27□□□□□ -2.05
COL27A1-201ENST00000356083 MUC5BQ9HC84 5762 aaPredicted RBP2.18□□□□□ -2.06
COL27A1-201ENST00000356083 KRTAP21-1Q3LI58 79 aa2.13□□□□□ -2.07
COL27A1-201ENST00000356083 KRTAP5-11Q6L8G4 156 aa2.07□□□□□ -2.08
COL27A1-201ENST00000356083 KRTAP21-2Q3LI59 83 aa2.05□□□□□ -2.08
COL27A1-201ENST00000356083 MUC16Q8WXI7 14507 aa1.96□□□□□ -2.1
COL27A1-201ENST00000356083 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.85□□□□□ -2.11
COL27A1-201ENST00000356083 AHNAK2Q8IVF2 5795 aa1.84□□□□□ -2.12
COL27A1-201ENST00000356083 AHNAKQ09666 5890 aaKnown RBP1.81□□□□□ -2.12
COL27A1-201ENST00000356083 KRTAP5-7Q6L8G8 165 aa1.8□□□□□ -2.12
Retrieved 77 of 20,778 RNA–protein pairs in 55.5 ms