RNA–Protein interactions for RNA: ENST00000346246.9

ARID3B-201, Transcript of AT-rich interaction domain 3B, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ARID3B, Length 4,271 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARID3B-201ENST00000346246 SYNE1Q8NF91 8797 aaKnown RBP4.77□□□□□ -1.65
ARID3B-201ENST00000346246 LOC100996750A0A140TA64 210 aa4.75□□□□□ -1.65
ARID3B-201ENST00000346246 LCE3BQ5TA77 95 aa4.75□□□□□ -1.65
ARID3B-201ENST00000346246 KRTAP9-6A8MVA2 160 aa4.72□□□□□ -1.65
ARID3B-201ENST00000346246 DSTQ03001 7570 aaKnown RBP4.7□□□□□ -1.66
ARID3B-201ENST00000346246 MT1MQ8N339 61 aa4.68□□□□□ -1.66
ARID3B-201ENST00000346246 FCGBPQ9Y6R7 5405 aaPredicted RBP4.68□□□□□ -1.66
ARID3B-201ENST00000346246 KRTAP12-4P60329 112 aa4.67□□□□□ -1.66
ARID3B-201ENST00000346246 SPRR2EP22531 72 aa4.66□□□□□ -1.66
ARID3B-201ENST00000346246 SPRR2BP35325 72 aa4.66□□□□□ -1.66
ARID3B-201ENST00000346246 SPRR2AP35326 72 aa4.66□□□□□ -1.66
ARID3B-201ENST00000346246 OBSCNQ5VST9 7968 aa4.62□□□□□ -1.67
ARID3B-201ENST00000346246 SSPOA2VEC9 5147 aa4.55□□□□□ -1.68
ARID3B-201ENST00000346246 KRTAP2-3P0C7H8 128 aa4.53□□□□□ -1.68
ARID3B-201ENST00000346246 KRTAP2-4Q9BYR9 128 aa4.53□□□□□ -1.68
ARID3B-201ENST00000346246 KRTAP2-1Q9BYU5 128 aa4.53□□□□□ -1.68
ARID3B-201ENST00000346246 MUC12Q9UKN1 5478 aa4.51□□□□□ -1.69
ARID3B-201ENST00000346246 LCE2DQ5TA82 110 aaPredicted RBP4.49□□□□□ -1.69
ARID3B-201ENST00000346246 SYNE2Q8WXH0 6885 aaKnown RBP4.47□□□□□ -1.69
ARID3B-201ENST00000346246 SPRR2DP22532 72 aa4.46□□□□□ -1.7
ARID3B-201ENST00000346246 KRTAP9-2Q9BYQ4 174 aa4.46□□□□□ -1.7
ARID3B-201ENST00000346246 LCE3DQ9BYE3 92 aa4.42□□□□□ -1.7
ARID3B-201ENST00000346246 KRTAP4-9Q9BYQ8 210 aa4.35□□□□□ -1.71
ARID3B-201ENST00000346246 LCE3EQ5T5B0 92 aa4.33□□□□□ -1.72
ARID3B-201ENST00000346246 LCE5AQ5TCM9 118 aa4.32□□□□□ -1.72
ARID3B-201ENST00000346246 MACF1Q9UPN3 7388 aaKnown RBP4.28□□□□□ -1.72
ARID3B-201ENST00000346246 MT1AP04731 61 aa4.22□□□□□ -1.73
ARID3B-201ENST00000346246 KRTAP6-1Q3LI64 71 aa4.21□□□□□ -1.74
ARID3B-201ENST00000346246 LCE1AQ5T7P2 110 aa4.17□□□□□ -1.74
ARID3B-201ENST00000346246 MT3P25713 68 aa4.1□□□□□ -1.75
ARID3B-201ENST00000346246 PRM1P04553 51 aa4.08□□□□□ -1.76
ARID3B-201ENST00000346246 MT4P47944 62 aa4.04□□□□□ -1.76
ARID3B-201ENST00000346246 KRTAP9-6A0A140TA67 174 aa3.96□□□□□ -1.78
ARID3B-201ENST00000346246 KRTAP6-2Q3LI66 62 aa3.95□□□□□ -1.78
ARID3B-201ENST00000346246 MDN1Q9NU22 5596 aa3.94□□□□□ -1.78
ARID3B-201ENST00000346246 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.93□□□□□ -1.78
ARID3B-201ENST00000346246 KRTAP9-4Q9BYQ2 154 aa3.93□□□□□ -1.78
ARID3B-201ENST00000346246 KRTAP6-3Q3LI67 103 aa3.92□□□□□ -1.78
ARID3B-201ENST00000346246 KRTAP9-7A8MTY7 169 aa3.88□□□□□ -1.79
ARID3B-201ENST00000346246 KRTAP5-9P26371 169 aa3.87□□□□□ -1.79
ARID3B-201ENST00000346246 LCE1DQ5T752 114 aa3.76□□□□□ -1.81
ARID3B-201ENST00000346246 LCE1BQ5T7P3 118 aa3.71□□□□□ -1.82
ARID3B-201ENST00000346246 MUC19Q7Z5P9 8384 aa3.65□□□□□ -1.82
ARID3B-201ENST00000346246 KRTAP5-5Q701N2 237 aaPredicted RBP3.57□□□□□ -1.84
ARID3B-201ENST00000346246 LCE4AQ5TA78 99 aa3.57□□□□□ -1.84
ARID3B-201ENST00000346246 KRTAP4-6Q9BYQ5 205 aa3.57□□□□□ -1.84
ARID3B-201ENST00000346246 KRTAP2-2Q9BYT5 123 aa3.51□□□□□ -1.85
ARID3B-201ENST00000346246 KRTAP20-1Q3LI63 56 aa3.5□□□□□ -1.85
ARID3B-201ENST00000346246 NEBP20929 6669 aa3.49□□□□□ -1.85
ARID3B-201ENST00000346246 KRTAP20-2Q3LI61 65 aa3.39□□□□□ -1.87
ARID3B-201ENST00000346246 LCE1EQ5T753 118 aa3.33□□□□□ -1.88
ARID3B-201ENST00000346246 KRTAP5-4Q6L8H1 288 aa3.2□□□□□ -1.9
ARID3B-201ENST00000346246 MUC5ACP98088 5654 aa3.12□□□□□ -1.91
ARID3B-201ENST00000346246 LCE1FQ5T754 118 aa3.1□□□□□ -1.91
ARID3B-201ENST00000346246 KRTAP4-11Q9BYQ6 195 aa3.1□□□□□ -1.91
ARID3B-201ENST00000346246 HMCN1Q96RW7 5635 aa3.08□□□□□ -1.92
ARID3B-201ENST00000346246 GPR98Q8WXG9 6306 aa3□□□□□ -1.93
ARID3B-201ENST00000346246 KRTAP5-2Q701N4 177 aa2.91□□□□□ -1.94
ARID3B-201ENST00000346246 KRTAP5-3Q6L8H2 238 aa2.88□□□□□ -1.95
ARID3B-201ENST00000346246 KRTAP4-4Q9BYR3 166 aa2.87□□□□□ -1.95
ARID3B-201ENST00000346246 LCE1CQ5T751 118 aa2.83□□□□□ -1.96
ARID3B-201ENST00000346246 KRTAP4-12Q9BQ66 201 aa2.79□□□□□ -1.96
ARID3B-201ENST00000346246 KRTAP4-2Q9BYR5 136 aa2.79□□□□□ -1.96
ARID3B-201ENST00000346246 KRTAP9-9Q9BYP9 154 aa2.77□□□□□ -1.97
ARID3B-201ENST00000346246 KRTAP5-10Q6L8G5 202 aa2.72□□□□□ -1.97
ARID3B-201ENST00000346246 AHNAK2Q8IVF2 5795 aa2.66□□□□□ -1.98
ARID3B-201ENST00000346246 KRTAP5-8O75690 187 aa2.57□□□□□ -2
ARID3B-201ENST00000346246 KRTAP5-1Q6L8H4 278 aa2.57□□□□□ -2
ARID3B-201ENST00000346246 KRTAP21-2Q3LI59 83 aa2.45□□□□□ -2.02
ARID3B-201ENST00000346246 MUC5BQ9HC84 5762 aaPredicted RBP2.43□□□□□ -2.02
ARID3B-201ENST00000346246 KRTAP5-11Q6L8G4 156 aa2.32□□□□□ -2.04
ARID3B-201ENST00000346246 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.3□□□□□ -2.04
ARID3B-201ENST00000346246 AHNAKQ09666 5890 aaKnown RBP2.2□□□□□ -2.06
ARID3B-201ENST00000346246 KRTAP5-7Q6L8G8 165 aa2.19□□□□□ -2.06
ARID3B-201ENST00000346246 KRTAP21-1Q3LI58 79 aa2.08□□□□□ -2.08
ARID3B-201ENST00000346246 PHGR1C9JFL3 82 aa1.99□□□□□ -2.09
ARID3B-201ENST00000346246 MUC16Q8WXI7 14507 aa1.29□□□□□ -2.2
Retrieved 77 of 20,778 RNA–protein pairs in 97 ms